RNA–Protein interactions for RNA: ENST00000380535.8

TNFSF13-203, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-203ENST00000380535 PARP4Q9UKK3 1724 aaKnown RBP17.56■□□□□ 0.4
TNFSF13-203ENST00000380535 NLRP2Q9NX02 1062 aa17.56■□□□□ 0.4
TNFSF13-203ENST00000380535 PKD1L3Q7Z443 1732 aa17.56■□□□□ 0.4
TNFSF13-203ENST00000380535 TSPYL6Q8N831 410 aa17.55■□□□□ 0.4
TNFSF13-203ENST00000380535 IL17REQ8NFR9 667 aa17.55■□□□□ 0.4
TNFSF13-203ENST00000380535 CABLES1Q8TDN4 633 aa17.55■□□□□ 0.4
TNFSF13-203ENST00000380535 NOP58Q9Y2X3 529 aaKnown RBP17.55■□□□□ 0.4
TNFSF13-203ENST00000380535 KDM3BQ7LBC6 1761 aa17.55■□□□□ 0.4
TNFSF13-203ENST00000380535 ANP32AP39687 249 aaKnown RBP17.55■□□□□ 0.4
TNFSF13-203ENST00000380535 HOXB7P09629 217 aa17.54■□□□□ 0.4
TNFSF13-203ENST00000380535 PTPRCP08575 1304 aa17.54■□□□□ 0.4
TNFSF13-203ENST00000380535 WDR17Q8IZU2 1322 aa17.54■□□□□ 0.4
TNFSF13-203ENST00000380535 RLBP1P12271 317 aa17.53■□□□□ 0.4
TNFSF13-203ENST00000380535 TEFQ10587 303 aa17.53■□□□□ 0.4
TNFSF13-203ENST00000380535 HSP90AB1P08238 724 aaKnown RBP17.52■□□□□ 0.4
TNFSF13-203ENST00000380535 COL14A1Q05707 1796 aaKnown RBP17.52■□□□□ 0.4
TNFSF13-203ENST00000380535 COL5A2P05997 1499 aaPredicted RBP17.52■□□□□ 0.39
TNFSF13-203ENST00000380535 TNNQ9UQP3 1299 aa17.52■□□□□ 0.39
TNFSF13-203ENST00000380535 SIPA1L3O60292 1781 aaPredicted RBP17.51■□□□□ 0.39
TNFSF13-203ENST00000380535 SCN11AQ9UI33 1791 aa17.51■□□□□ 0.39
TNFSF13-203ENST00000380535 RNMTO43148 476 aaKnown RBP17.5■□□□□ 0.39
TNFSF13-203ENST00000380535 ELL2O00472 640 aaPredicted RBP17.5■□□□□ 0.39
TNFSF13-203ENST00000380535 CHRNA2Q15822 529 aa17.5■□□□□ 0.39
TNFSF13-203ENST00000380535 CCDC30Q5VVM6 783 aa17.5■□□□□ 0.39
TNFSF13-203ENST00000380535 IPO9Q96P70 1041 aaKnown RBP17.5■□□□□ 0.39
TNFSF13-203ENST00000380535 STK31Q9BXU1 1019 aa17.5■□□□□ 0.39
TNFSF13-203ENST00000380535 ABCC4O15439 1325 aa17.5■□□□□ 0.39
TNFSF13-203ENST00000380535 TOM1O60784 492 aa17.49■□□□□ 0.39
TNFSF13-203ENST00000380535 ITPRIPQ8IWB1 547 aa17.49■□□□□ 0.39
TNFSF13-203ENST00000380535 PHLPP1O60346 1717 aa17.49■□□□□ 0.39
TNFSF13-203ENST00000380535 IFNL2Q8IZJ0 200 aa17.49■□□□□ 0.39
TNFSF13-203ENST00000380535 RWDD1Q9H446 243 aaPredicted RBP17.49■□□□□ 0.39
TNFSF13-203ENST00000380535 CARD10Q9BWT7 1032 aa17.48■□□□□ 0.39
TNFSF13-203ENST00000380535 MEGF6O75095 1541 aa17.48■□□□□ 0.39
TNFSF13-203ENST00000380535 A0A0U1RQG5 324 aaPredicted RBP17.47■□□□□ 0.39
TNFSF13-203ENST00000380535 TMEM57Q8N5G2 664 aa17.47■□□□□ 0.39
TNFSF13-203ENST00000380535 IGHDP01880 384 aa17.46■□□□□ 0.39
TNFSF13-203ENST00000380535 SKAP1Q86WV1 359 aa17.46■□□□□ 0.39
TNFSF13-203ENST00000380535 TOM1L2Q6ZVM7 507 aa17.46■□□□□ 0.39
TNFSF13-203ENST00000380535 MRC1P22897 1456 aa17.46■□□□□ 0.39
TNFSF13-203ENST00000380535 COL16A1Q07092 1604 aaPredicted RBP17.46■□□□□ 0.38
TNFSF13-203ENST00000380535 BTBD11A6QL63 1104 aa17.45■□□□□ 0.38
TNFSF13-203ENST00000380535 PHKG2P15735 406 aa17.45■□□□□ 0.38
TNFSF13-203ENST00000380535 RBM10P98175 930 aaKnown RBP17.45■□□□□ 0.38
TNFSF13-203ENST00000380535 DCAF5Q96JK2 942 aa17.45■□□□□ 0.38
TNFSF13-203ENST00000380535 LGR6Q9HBX8 967 aa17.45■□□□□ 0.38
TNFSF13-203ENST00000380535 MIS18AQ9NYP9 233 aa17.45■□□□□ 0.38
TNFSF13-203ENST00000380535 PDE4AP27815 886 aa17.45■□□□□ 0.38
TNFSF13-203ENST00000380535 EVA1CP58658 441 aa17.44■□□□□ 0.38
TNFSF13-203ENST00000380535 INTS3Q68E01 1043 aaKnown RBP17.44■□□□□ 0.38
TNFSF13-203ENST00000380535 MPRIPQ6WCQ1 1025 aa17.44■□□□□ 0.38
TNFSF13-203ENST00000380535 BACH2Q9BYV9 841 aa17.44■□□□□ 0.38
TNFSF13-203ENST00000380535 ZBTB40Q9NUA8 1239 aa17.44■□□□□ 0.38
TNFSF13-203ENST00000380535 PCDH11XQ9BZA7 1347 aa17.44■□□□□ 0.38
TNFSF13-203ENST00000380535 PCDH11YQ9BZA8 1340 aa17.44■□□□□ 0.38
TNFSF13-203ENST00000380535 CDK11BP21127 795 aaKnown RBP17.43■□□□□ 0.38
TNFSF13-203ENST00000380535 EIF4A1P60842 406 aaKnown RBP17.43■□□□□ 0.38
TNFSF13-203ENST00000380535 N4BP2Q86UW6 1770 aaPredicted RBP17.43■□□□□ 0.38
TNFSF13-203ENST00000380535 SLC4A2P04920 1241 aa17.43■□□□□ 0.38
TNFSF13-203ENST00000380535 HDAC1Q13547 482 aaPredicted RBP17.43■□□□□ 0.38
TNFSF13-203ENST00000380535 PCDHB15Q9Y5E8 787 aa17.43■□□□□ 0.38
TNFSF13-203ENST00000380535 PXDNLA1KZ92 1463 aa17.42■□□□□ 0.38
TNFSF13-203ENST00000380535 IL2RBP14784 551 aa17.42■□□□□ 0.38
TNFSF13-203ENST00000380535 KRT24Q2M2I5 525 aa17.42■□□□□ 0.38
TNFSF13-203ENST00000380535 PLCH1Q4KWH8 1693 aa17.42■□□□□ 0.38
TNFSF13-203ENST00000380535 ZMYND15Q9H091 742 aa17.41■□□□□ 0.38
TNFSF13-203ENST00000380535 SLC52A2Q9HAB3 445 aa17.41■□□□□ 0.38
TNFSF13-203ENST00000380535 ZBTB47Q9UFB7 747 aaPredicted RBP17.41■□□□□ 0.38
TNFSF13-203ENST00000380535 CCT4P50991 539 aaKnown RBP17.4■□□□□ 0.38
TNFSF13-203ENST00000380535 KDM6AO15550 1401 aaPredicted RBP17.4■□□□□ 0.38
TNFSF13-203ENST00000380535 HEG1Q9ULI3 1381 aa17.4■□□□□ 0.38
TNFSF13-203ENST00000380535 ZBTB7BO15156 539 aaPredicted RBP17.4■□□□□ 0.38
TNFSF13-203ENST00000380535 HDGFL1Q5TGJ6 251 aa17.4■□□□□ 0.38
TNFSF13-203ENST00000380535 ZCRB1Q8TBF4 217 aaKnown RBP17.4■□□□□ 0.38
TNFSF13-203ENST00000380535 RGS12O14924 1447 aa17.4■□□□□ 0.38
TNFSF13-203ENST00000380535 HSP90B1P14625 803 aaKnown RBP17.38■□□□□ 0.37
TNFSF13-203ENST00000380535 NKX1-1Q15270 411 aaPredicted RBP17.38■□□□□ 0.37
TNFSF13-203ENST00000380535 NWD2Q9ULI1 1742 aa17.37■□□□□ 0.37
TNFSF13-203ENST00000380535 ERVV-2B6SEH9 535 aa17.36■□□□□ 0.37
TNFSF13-203ENST00000380535 DEKP35659 375 aaKnown RBP17.36■□□□□ 0.37
TNFSF13-203ENST00000380535 CYP27B1O15528 508 aa17.36■□□□□ 0.37
TNFSF13-203ENST00000380535 FLIIQ13045 1269 aa17.36■□□□□ 0.37
TNFSF13-203ENST00000380535 CDCA7Q9BWT1 371 aaPredicted RBP17.36■□□□□ 0.37
TNFSF13-203ENST00000380535 STRN4Q9NRL3 753 aa17.36■□□□□ 0.37
TNFSF13-203ENST00000380535 SHANK3Q9BYB0 1731 aa17.35■□□□□ 0.37
TNFSF13-203ENST00000380535 WNK3Q9BYP7 1800 aa17.35■□□□□ 0.37
TNFSF13-203ENST00000380535 RGS3P49796 1198 aa17.35■□□□□ 0.37
TNFSF13-203ENST00000380535 LARP1Q6PKG0 1096 aaKnown RBP17.35■□□□□ 0.37
TNFSF13-203ENST00000380535 BTG4Q9NY30 223 aa17.35■□□□□ 0.37
TNFSF13-203ENST00000380535 DBF4Q9UBU7 674 aaPredicted RBP17.35■□□□□ 0.37
TNFSF13-203ENST00000380535 ZNF790Q6PG37 636 aa17.35■□□□□ 0.37
TNFSF13-203ENST00000380535 BCCIPQ9P287 314 aaKnown RBP eCLIP17.35■□□□□ 0.37
TNFSF13-203ENST00000380535 GIGYF1O75420 1035 aaPredicted RBP17.34■□□□□ 0.37
TNFSF13-203ENST00000380535 CABP4P57796 275 aa17.33■□□□□ 0.37
TNFSF13-203ENST00000380535 TTC5Q8N0Z6 440 aa17.33■□□□□ 0.37
TNFSF13-203ENST00000380535 GCC1Q96CN9 775 aa17.33■□□□□ 0.37
TNFSF13-203ENST00000380535 FKBP5Q13451 457 aaPredicted RBP17.33■□□□□ 0.36
TNFSF13-203ENST00000380535 NRAPQ86VF7 1730 aa17.33■□□□□ 0.36
TNFSF13-203ENST00000380535 FAM161AQ3B820 660 aa17.32■□□□□ 0.36
TNFSF13-203ENST00000380535 RPAP2Q8IXW5 612 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms