RNA–Protein interactions for RNA: ENST00000378980.7

CNTFR-202, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-202ENST00000378980 HMMRO75330 724 aa26.67■■□□□ 1.86
CNTFR-202ENST00000378980 ZNF530Q6P9A1 599 aaPredicted RBP26.67■■□□□ 1.86
CNTFR-202ENST00000378980 ANKRD24Q8TF21 1146 aa26.67■■□□□ 1.86
CNTFR-202ENST00000378980 AMOTQ4VCS5 1084 aa26.67■■□□□ 1.86
CNTFR-202ENST00000378980 HDGFL1Q5TGJ6 251 aa26.67■■□□□ 1.86
CNTFR-202ENST00000378980 TBC1D9Q6ZT07 1266 aa26.67■■□□□ 1.86
CNTFR-202ENST00000378980 PXDNQ92626 1479 aa26.66■■□□□ 1.86
CNTFR-202ENST00000378980 GSPT1P15170 499 aaKnown RBP26.66■■□□□ 1.86
CNTFR-202ENST00000378980 PLEKHG5O94827 1062 aa26.66■■□□□ 1.86
CNTFR-202ENST00000378980 GNAI2P04899 355 aa26.66■■□□□ 1.86
CNTFR-202ENST00000378980 EIF4A1P60842 406 aaKnown RBP26.65■■□□□ 1.86
CNTFR-202ENST00000378980 OVOS2A0A0G2JMS6 1433 aa26.65■■□□□ 1.86
CNTFR-202ENST00000378980 DCCP43146 1447 aa26.65■■□□□ 1.86
CNTFR-202ENST00000378980 TTC22Q5TAA0 569 aa26.64■■□□□ 1.86
CNTFR-202ENST00000378980 ANTXR1Q9H6X2 564 aa26.64■■□□□ 1.86
CNTFR-202ENST00000378980 CDC45O75419 566 aa26.64■■□□□ 1.85
CNTFR-202ENST00000378980 HOXB7P09629 217 aa26.64■■□□□ 1.85
CNTFR-202ENST00000378980 TMEM94Q12767 1356 aa26.64■■□□□ 1.85
CNTFR-202ENST00000378980 C16orf71Q8IYS4 520 aaPredicted RBP26.64■■□□□ 1.85
CNTFR-202ENST00000378980 GNAI3P08754 354 aa26.63■■□□□ 1.85
CNTFR-202ENST00000378980 SLKQ9H2G2 1235 aaPredicted RBP26.63■■□□□ 1.85
CNTFR-202ENST00000378980 AXIN2Q9Y2T1 843 aa26.63■■□□□ 1.85
CNTFR-202ENST00000378980 NCOA3Q9Y6Q9 1424 aa26.61■■□□□ 1.85
CNTFR-202ENST00000378980 ATF3P18847 181 aa26.61■■□□□ 1.85
CNTFR-202ENST00000378980 TEFQ10587 303 aa26.61■■□□□ 1.85
CNTFR-202ENST00000378980 SMARCA5O60264 1052 aaPredicted RBP26.61■■□□□ 1.85
CNTFR-202ENST00000378980 C1orf141Q5JVX7 400 aa26.6■■□□□ 1.85
CNTFR-202ENST00000378980 MPRIPQ6WCQ1 1025 aa26.6■■□□□ 1.85
CNTFR-202ENST00000378980 OTUD7AQ8TE49 926 aaPredicted RBP26.6■■□□□ 1.85
CNTFR-202ENST00000378980 LMTK3Q96Q04 1460 aa26.6■■□□□ 1.85
CNTFR-202ENST00000378980 SIPA1L3O60292 1781 aaPredicted RBP26.6■■□□□ 1.85
CNTFR-202ENST00000378980 RNMTO43148 476 aaKnown RBP26.59■■□□□ 1.85
CNTFR-202ENST00000378980 FRAT2O75474 233 aaPredicted RBP26.59■■□□□ 1.85
CNTFR-202ENST00000378980 BTBD11A6QL63 1104 aa26.59■■□□□ 1.85
CNTFR-202ENST00000378980 DNAJC5Q9H3Z4 198 aa26.59■■□□□ 1.85
CNTFR-202ENST00000378980 ADAMTS7Q9UKP4 1686 aa26.59■■□□□ 1.85
CNTFR-202ENST00000378980 APBB1O00213 710 aa26.58■■□□□ 1.85
CNTFR-202ENST00000378980 CHMP4AQ9BY43 222 aa26.58■■□□□ 1.85
CNTFR-202ENST00000378980 PHAXQ9H814 394 aaKnown RBP26.58■■□□□ 1.85
CNTFR-202ENST00000378980 ERBB3P21860 1342 aa26.58■■□□□ 1.85
CNTFR-202ENST00000378980 KCNQ3O43525 872 aa26.58■■□□□ 1.84
CNTFR-202ENST00000378980 BCL11AQ9H165 835 aa26.56■■□□□ 1.84
CNTFR-202ENST00000378980 EIF2S2P20042 333 aaKnown RBP26.56■■□□□ 1.84
CNTFR-202ENST00000378980 HSCBQ8IWL3 235 aa26.56■■□□□ 1.84
CNTFR-202ENST00000378980 EIF5BO60841 1220 aaKnown RBP26.55■■□□□ 1.84
CNTFR-202ENST00000378980 CRYBG1Q9Y4K1 1723 aa26.55■■□□□ 1.84
CNTFR-202ENST00000378980 ZC3H6P61129 1189 aaKnown RBP26.54■■□□□ 1.84
CNTFR-202ENST00000378980 ATP8B2P98198 1209 aa26.54■■□□□ 1.84
CNTFR-202ENST00000378980 SNX21Q969T3 373 aa26.54■■□□□ 1.84
CNTFR-202ENST00000378980 USP44Q9H0E7 712 aa26.54■■□□□ 1.84
CNTFR-202ENST00000378980 COL18A1P39060 1754 aa26.54■■□□□ 1.84
CNTFR-202ENST00000378980 KIF2CQ99661 725 aa26.54■■□□□ 1.84
CNTFR-202ENST00000378980 CHPF2Q9P2E5 772 aa26.54■■□□□ 1.84
CNTFR-202ENST00000378980 PNMA6EA0A0J9YXQ4 647 aa26.53■■□□□ 1.84
CNTFR-202ENST00000378980 LRRFIP2Q9Y608 721 aaKnown RBP26.53■■□□□ 1.84
CNTFR-202ENST00000378980 EXOC6BQ9Y2D4 811 aa26.52■■□□□ 1.84
CNTFR-202ENST00000378980 DDX17Q92841 729 aaKnown RBP26.51■■□□□ 1.83
CNTFR-202ENST00000378980 OSBPL3Q9H4L5 887 aa26.51■■□□□ 1.83
CNTFR-202ENST00000378980 UBTFL1P0CB47 393 aaPredicted RBP26.51■■□□□ 1.83
CNTFR-202ENST00000378980 SDSP20132 328 aa26.51■■□□□ 1.83
CNTFR-202ENST00000378980 HEG1Q9ULI3 1381 aa26.51■■□□□ 1.83
CNTFR-202ENST00000378980 TUBGCP6Q96RT7 1819 aa26.5■■□□□ 1.83
CNTFR-202ENST00000378980 CADPS2Q86UW7 1296 aa26.5■■□□□ 1.83
CNTFR-202ENST00000378980 SRCIN1Q9C0H9 1055 aa26.5■■□□□ 1.83
CNTFR-202ENST00000378980 NPHP3Q7Z494 1330 aa26.49■■□□□ 1.83
CNTFR-202ENST00000378980 IBTKQ9P2D0 1353 aaPredicted RBP26.49■■□□□ 1.83
CNTFR-202ENST00000378980 TNS3Q68CZ2 1445 aa26.49■■□□□ 1.83
CNTFR-202ENST00000378980 SPRYD3Q8NCJ5 442 aa26.49■■□□□ 1.83
CNTFR-202ENST00000378980 ABCC6O95255 1503 aa26.49■■□□□ 1.83
CNTFR-202ENST00000378980 SCN11AQ9UI33 1791 aa26.49■■□□□ 1.83
CNTFR-202ENST00000378980 LRRCC1Q9C099 1032 aa26.48■■□□□ 1.83
CNTFR-202ENST00000378980 PDE1AP54750 535 aa26.48■■□□□ 1.83
CNTFR-202ENST00000378980 XIRP1Q702N8 1843 aaKnown RBP26.47■■□□□ 1.83
CNTFR-202ENST00000378980 SALL3Q9BXA9 1300 aa26.47■■□□□ 1.83
CNTFR-202ENST00000378980 DNAAF4Q8WXU2 420 aa26.47■■□□□ 1.83
CNTFR-202ENST00000378980 GIGYF1O75420 1035 aaPredicted RBP26.46■■□□□ 1.83
CNTFR-202ENST00000378980 DBF4Q9UBU7 674 aaPredicted RBP26.46■■□□□ 1.83
CNTFR-202ENST00000378980 ADCY9O60503 1353 aa26.45■■□□□ 1.83
CNTFR-202ENST00000378980 PI4KAP2A4QPH2 592 aa26.45■■□□□ 1.83
CNTFR-202ENST00000378980 BEND3Q5T5X7 828 aa26.45■■□□□ 1.83
CNTFR-202ENST00000378980 PI4KAP1Q8N8J0 262 aa26.45■■□□□ 1.83
CNTFR-202ENST00000378980 RAPGEF4Q8WZA2 1011 aa26.45■■□□□ 1.83
CNTFR-202ENST00000378980 CASC1Q6TDU7 716 aa26.45■■□□□ 1.82
CNTFR-202ENST00000378980 NLRP2Q9NX02 1062 aa26.45■■□□□ 1.82
CNTFR-202ENST00000378980 ANXA1P04083 346 aa26.44■■□□□ 1.82
CNTFR-202ENST00000378980 SSH3Q8TE77 659 aa26.44■■□□□ 1.82
CNTFR-202ENST00000378980 CHMP5Q9NZZ3 219 aa26.44■■□□□ 1.82
CNTFR-202ENST00000378980 GSE1Q14687 1217 aa26.43■■□□□ 1.82
CNTFR-202ENST00000378980 MEGF6O75095 1541 aa26.43■■□□□ 1.82
CNTFR-202ENST00000378980 HSPA2P54652 639 aa26.42■■□□□ 1.82
CNTFR-202ENST00000378980 USP26Q9BXU7 913 aa26.42■■□□□ 1.82
CNTFR-202ENST00000378980 KDM6AO15550 1401 aaPredicted RBP26.41■■□□□ 1.82
CNTFR-202ENST00000378980 POLA2Q14181 598 aa26.41■■□□□ 1.82
CNTFR-202ENST00000378980 CABLES1Q8TDN4 633 aa26.41■■□□□ 1.82
CNTFR-202ENST00000378980 PLEKHG2Q9H7P9 1386 aa26.41■■□□□ 1.82
CNTFR-202ENST00000378980 SPATA31A3Q5VYP0 1347 aa26.41■■□□□ 1.82
CNTFR-202ENST00000378980 TATP17735 454 aaPredicted RBP26.4■■□□□ 1.82
CNTFR-202ENST00000378980 MX1P20591 662 aa26.4■■□□□ 1.82
CNTFR-202ENST00000378980 NBPF7P0C2Y1 421 aaPredicted RBP26.39■■□□□ 1.82
CNTFR-202ENST00000378980 DDIT3P35638 169 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms