RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 TOP1P11387 765 aaKnown RBP13.04□□□□□ -0.32
RAD50-201ENST00000378823 USP5P45974 858 aa13.04□□□□□ -0.32
RAD50-201ENST00000378823 TNIP1Q15025 636 aa13.04□□□□□ -0.32
RAD50-201ENST00000378823 KLHL10Q6JEL2 608 aa13.04□□□□□ -0.32
RAD50-201ENST00000378823 MICALCLQ6ZW33 695 aa13.04□□□□□ -0.32
RAD50-201ENST00000378823 TSG101Q99816 390 aa13.04□□□□□ -0.32
RAD50-201ENST00000378823 CALCOCO1Q9P1Z2 691 aa13.04□□□□□ -0.32
RAD50-201ENST00000378823 CFAP70Q5T0N1 1121 aa13.04□□□□□ -0.32
RAD50-201ENST00000378823 CGNQ9P2M7 1197 aaKnown RBP13.04□□□□□ -0.32
RAD50-201ENST00000378823 RAB11FIP3O75154 756 aa13.04□□□□□ -0.32
RAD50-201ENST00000378823 ZNF530Q6P9A1 599 aaPredicted RBP13.04□□□□□ -0.32
RAD50-201ENST00000378823 CCDC83Q8IWF9 413 aa13.04□□□□□ -0.32
RAD50-201ENST00000378823 RAI14Q9P0K7 980 aa13.04□□□□□ -0.32
RAD50-201ENST00000378823 FAM69CQ0P6D2 419 aa13.03□□□□□ -0.32
RAD50-201ENST00000378823 TAOK3Q9H2K8 898 aa13.03□□□□□ -0.32
RAD50-201ENST00000378823 KIF4BQ2VIQ3 1234 aa13.03□□□□□ -0.32
RAD50-201ENST00000378823 PIBF1Q8WXW3 757 aa13.03□□□□□ -0.32
RAD50-201ENST00000378823 RAB34Q9BZG1 259 aa13.03□□□□□ -0.32
RAD50-201ENST00000378823 KIF1BPQ96EK5 621 aa13.03□□□□□ -0.32
RAD50-201ENST00000378823 C9orf84Q5VXU9 1444 aa13.03□□□□□ -0.32
RAD50-201ENST00000378823 TOM1L2Q6ZVM7 507 aa13.03□□□□□ -0.32
RAD50-201ENST00000378823 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.03□□□□□ -0.32
RAD50-201ENST00000378823 CFTRP13569 1480 aa13.03□□□□□ -0.32
RAD50-201ENST00000378823 SLC12A5Q9H2X9 1139 aa13.03□□□□□ -0.32
RAD50-201ENST00000378823 NKTRP30414 1462 aaKnown RBP13.03□□□□□ -0.32
RAD50-201ENST00000378823 EFCAB5A4FU69 1503 aa13.03□□□□□ -0.32
RAD50-201ENST00000378823 IDH1O75874 414 aaKnown RBP13.03□□□□□ -0.32
RAD50-201ENST00000378823 CCDC178Q5BJE1 867 aa13.03□□□□□ -0.32
RAD50-201ENST00000378823 HOOK3Q86VS8 718 aa13.03□□□□□ -0.32
RAD50-201ENST00000378823 KIAA1107Q9UPP5 1409 aa13.02□□□□□ -0.32
RAD50-201ENST00000378823 PAFAH1B1P43034 410 aa13.02□□□□□ -0.32
RAD50-201ENST00000378823 CCDC150Q8NCX0 1101 aa13.02□□□□□ -0.32
RAD50-201ENST00000378823 NUP88Q99567 741 aaPredicted RBP13.02□□□□□ -0.32
RAD50-201ENST00000378823 USO1O60763 962 aaKnown RBP13.02□□□□□ -0.32
RAD50-201ENST00000378823 DDX54Q8TDD1 881 aaKnown RBP13.02□□□□□ -0.32
RAD50-201ENST00000378823 BCCIPQ9P287 314 aaKnown RBP eCLIP13.02□□□□□ -0.32
RAD50-201ENST00000378823 CLIP2Q9UDT6 1046 aa13.02□□□□□ -0.32
RAD50-201ENST00000378823 GLRX3O76003 335 aaKnown RBP13.02□□□□□ -0.32
RAD50-201ENST00000378823 SH2B1Q9NRF2 756 aaPredicted RBP13.02□□□□□ -0.32
RAD50-201ENST00000378823 PPP1R1BQ9UD71 204 aaPredicted RBP13.02□□□□□ -0.32
RAD50-201ENST00000378823 PPM1EQ8WY54 764 aa13.02□□□□□ -0.33
RAD50-201ENST00000378823 HMGB1P09429 215 aaKnown RBP13.02□□□□□ -0.33
RAD50-201ENST00000378823 PHAXQ9H814 394 aaKnown RBP13.02□□□□□ -0.33
RAD50-201ENST00000378823 URI1O94763 535 aaPredicted RBP13.02□□□□□ -0.33
RAD50-201ENST00000378823 AKAP2Q9Y2D5 859 aa13.02□□□□□ -0.33
RAD50-201ENST00000378823 IGHMBP2P38935 993 aaKnown RBP13.02□□□□□ -0.33
RAD50-201ENST00000378823 OSCARQ8IYS5 282 aa13.02□□□□□ -0.33
RAD50-201ENST00000378823 C8orf76Q96K31 380 aa13.02□□□□□ -0.33
RAD50-201ENST00000378823 CBX1P83916 185 aa13.01□□□□□ -0.33
RAD50-201ENST00000378823 CEP63Q96MT8 703 aa13.01□□□□□ -0.33
RAD50-201ENST00000378823 NAA15Q9BXJ9 866 aaKnown RBP13.01□□□□□ -0.33
RAD50-201ENST00000378823 RPAP2Q8IXW5 612 aaPredicted RBP13.01□□□□□ -0.33
RAD50-201ENST00000378823 MAPK8IP2Q13387 824 aaPredicted RBP13.01□□□□□ -0.33
RAD50-201ENST00000378823 SPECC1Q5M775 1068 aa13.01□□□□□ -0.33
RAD50-201ENST00000378823 IL1RAPL2Q9NP60 686 aa13.01□□□□□ -0.33
RAD50-201ENST00000378823 ABCF2Q9UG63 623 aa13.01□□□□□ -0.33
RAD50-201ENST00000378823 GSDMDP57764 484 aa13□□□□□ -0.33
RAD50-201ENST00000378823 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13□□□□□ -0.33
RAD50-201ENST00000378823 SPINK5Q9NQ38 1064 aaPredicted RBP13□□□□□ -0.33
RAD50-201ENST00000378823 CCDC175P0C221 793 aa13□□□□□ -0.33
RAD50-201ENST00000378823 AEBP2Q6ZN18 517 aaPredicted RBP13□□□□□ -0.33
RAD50-201ENST00000378823 TXNDC2Q86VQ3 553 aa13□□□□□ -0.33
RAD50-201ENST00000378823 TMEM57Q8N5G2 664 aa13□□□□□ -0.33
RAD50-201ENST00000378823 NEMFO60524 1076 aa13□□□□□ -0.33
RAD50-201ENST00000378823 PPP4R3AQ6IN85 833 aa13□□□□□ -0.33
RAD50-201ENST00000378823 CABP1Q9NZU7 370 aa13□□□□□ -0.33
RAD50-201ENST00000378823 GNAT3A8MTJ3 354 aa13□□□□□ -0.33
RAD50-201ENST00000378823 SMC1AQ14683 1233 aaKnown RBP13□□□□□ -0.33
RAD50-201ENST00000378823 C16orf45Q96MC5 204 aaPredicted RBP12.99□□□□□ -0.33
RAD50-201ENST00000378823 NAPBQ9H115 298 aa12.99□□□□□ -0.33
RAD50-201ENST00000378823 FCHSD2O94868 740 aa12.99□□□□□ -0.33
RAD50-201ENST00000378823 RTEL1-TNFRSF6BF6WH68 1400 aa12.99□□□□□ -0.33
RAD50-201ENST00000378823 EXOC6BQ9Y2D4 811 aa12.99□□□□□ -0.33
RAD50-201ENST00000378823 MKNK2Q9HBH9 465 aa12.99□□□□□ -0.33
RAD50-201ENST00000378823 TIAM1Q13009 1591 aa12.99□□□□□ -0.33
RAD50-201ENST00000378823 POTEB2H3BUK9 544 aa12.99□□□□□ -0.33
RAD50-201ENST00000378823 STARD3NLO95772 234 aa12.99□□□□□ -0.33
RAD50-201ENST00000378823 UBE4AQ14139 1066 aa12.99□□□□□ -0.33
RAD50-201ENST00000378823 CTNNBL1Q8WYA6 563 aaPredicted RBP12.99□□□□□ -0.33
RAD50-201ENST00000378823 FEZ1Q99689 392 aa12.99□□□□□ -0.33
RAD50-201ENST00000378823 TNNT1P13805 278 aa12.98□□□□□ -0.33
RAD50-201ENST00000378823 CTR9Q6PD62 1173 aa12.98□□□□□ -0.33
RAD50-201ENST00000378823 METTL24Q5JXM2 366 aa12.98□□□□□ -0.33
RAD50-201ENST00000378823 CNNM3Q8NE01 707 aa12.98□□□□□ -0.33
RAD50-201ENST00000378823 ALS2CR12Q96Q35 445 aa12.98□□□□□ -0.33
RAD50-201ENST00000378823 POLR3GO15318 223 aaPredicted RBP12.98□□□□□ -0.33
RAD50-201ENST00000378823 LARP1Q6PKG0 1096 aaKnown RBP12.98□□□□□ -0.33
RAD50-201ENST00000378823 ANKRD30BQ9BXX2 1392 aa12.98□□□□□ -0.33
RAD50-201ENST00000378823 GOLGA6L9A6NEM1 432 aa12.98□□□□□ -0.33
RAD50-201ENST00000378823 MX1P20591 662 aa12.98□□□□□ -0.33
RAD50-201ENST00000378823 TMEM266Q2M3C6 531 aa12.98□□□□□ -0.33
RAD50-201ENST00000378823 PODXL2Q9NZ53 605 aa12.98□□□□□ -0.33
RAD50-201ENST00000378823 MINDY4BA8MYZ0 360 aa12.98□□□□□ -0.33
RAD50-201ENST00000378823 HLTFQ14527 1009 aaKnown RBP eCLIP12.98□□□□□ -0.33
RAD50-201ENST00000378823 IQCA1Q86XH1 822 aa12.98□□□□□ -0.33
RAD50-201ENST00000378823 RNF187Q5TA31 235 aaPredicted RBP12.98□□□□□ -0.33
RAD50-201ENST00000378823 CETN1Q12798 172 aa12.97□□□□□ -0.33
RAD50-201ENST00000378823 FERMT3Q86UX7 667 aa12.97□□□□□ -0.33
RAD50-201ENST00000378823 ZNF652Q9Y2D9 606 aa12.97□□□□□ -0.33
RAD50-201ENST00000378823 YEATS4O95619 227 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms