RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 RAB34Q9BZG1 259 aa5.79□□□□□ -1.48
PCDH9-201ENST00000377861 RMND1Q9NWS8 449 aa5.79□□□□□ -1.48
PCDH9-201ENST00000377861 PHF23Q9BUL5 403 aaPredicted RBP5.79□□□□□ -1.48
PCDH9-201ENST00000377861 NAP1L4Q99733 375 aaKnown RBP5.79□□□□□ -1.48
PCDH9-201ENST00000377861 ALDH8A1Q9H2A2 487 aaPredicted RBP5.79□□□□□ -1.48
PCDH9-201ENST00000377861 TBX22Q9Y458 520 aa5.79□□□□□ -1.48
PCDH9-201ENST00000377861 ZKSCAN5Q9Y2L8 839 aa5.79□□□□□ -1.48
PCDH9-201ENST00000377861 IFI16Q16666 785 aaKnown RBP5.78□□□□□ -1.48
PCDH9-201ENST00000377861 NAA15Q9BXJ9 866 aaKnown RBP5.78□□□□□ -1.48
PCDH9-201ENST00000377861 CCDC84Q86UT8 332 aaPredicted RBP5.78□□□□□ -1.48
PCDH9-201ENST00000377861 OGFRQ9NZT2 677 aa5.78□□□□□ -1.48
PCDH9-201ENST00000377861 APOBRQ0VD83 1088 aa5.78□□□□□ -1.48
PCDH9-201ENST00000377861 MYL1P05976 194 aa5.78□□□□□ -1.48
PCDH9-201ENST00000377861 BRAPQ7Z569 592 aa5.78□□□□□ -1.48
PCDH9-201ENST00000377861 RNF14Q9UBS8 474 aa5.78□□□□□ -1.48
PCDH9-201ENST00000377861 FEZ2Q9UHY8 353 aaPredicted RBP5.78□□□□□ -1.48
PCDH9-201ENST00000377861 CUL7Q14999 1698 aa5.78□□□□□ -1.48
PCDH9-201ENST00000377861 RCAN1P53805 252 aa5.78□□□□□ -1.48
PCDH9-201ENST00000377861 KCTD17Q8N5Z5 321 aa5.78□□□□□ -1.48
PCDH9-201ENST00000377861 MPHOSPH8Q99549 860 aa5.78□□□□□ -1.48
PCDH9-201ENST00000377861 NUCKS1Q9H1E3 243 aaKnown RBP5.78□□□□□ -1.48
PCDH9-201ENST00000377861 PTPN14Q15678 1187 aa5.78□□□□□ -1.48
PCDH9-201ENST00000377861 ARHGAP27Q6ZUM4 889 aa5.78□□□□□ -1.48
PCDH9-201ENST00000377861 UGGT2Q9NYU1 1516 aa5.78□□□□□ -1.48
PCDH9-201ENST00000377861 ELP1O95163 1332 aa5.78□□□□□ -1.48
PCDH9-201ENST00000377861 SLF2Q8IX21 1173 aa5.78□□□□□ -1.48
PCDH9-201ENST00000377861 PRPF40AO75400 957 aaKnown RBP5.78□□□□□ -1.48
PCDH9-201ENST00000377861 PLCD4Q9BRC7 762 aa5.78□□□□□ -1.48
PCDH9-201ENST00000377861 STAP2Q9UGK3 403 aa5.78□□□□□ -1.48
PCDH9-201ENST00000377861 PNMA2Q9UL42 364 aa5.78□□□□□ -1.48
PCDH9-201ENST00000377861 ZNF521Q96K83 1311 aa5.78□□□□□ -1.48
PCDH9-201ENST00000377861 NBPF7P0C2Y1 421 aaPredicted RBP5.78□□□□□ -1.48
PCDH9-201ENST00000377861 GPATCH8Q9UKJ3 1502 aaKnown RBP5.78□□□□□ -1.48
PCDH9-201ENST00000377861 ELOA2Q8IYF1 753 aaPredicted RBP5.78□□□□□ -1.48
PCDH9-201ENST00000377861 CCDC150Q8NCX0 1101 aa5.78□□□□□ -1.48
PCDH9-201ENST00000377861 SSH2Q76I76 1423 aa5.78□□□□□ -1.48
PCDH9-201ENST00000377861 LUZP1Q86V48 1076 aa5.78□□□□□ -1.48
PCDH9-201ENST00000377861 STMN4Q9H169 189 aaPredicted RBP5.78□□□□□ -1.48
PCDH9-201ENST00000377861 ZBTB7BO15156 539 aaPredicted RBP5.78□□□□□ -1.48
PCDH9-201ENST00000377861 TBC1D2Q9BYX2 928 aa5.78□□□□□ -1.48
PCDH9-201ENST00000377861 KCNJ6P48051 423 aa5.77□□□□□ -1.48
PCDH9-201ENST00000377861 BLOC1S2Q6QNY1 142 aa5.77□□□□□ -1.49
PCDH9-201ENST00000377861 HOMEZQ8IX15 550 aa5.77□□□□□ -1.49
PCDH9-201ENST00000377861 ANKRD44Q8N8A2 993 aa5.77□□□□□ -1.49
PCDH9-201ENST00000377861 FRAT2O75474 233 aaPredicted RBP5.77□□□□□ -1.49
PCDH9-201ENST00000377861 ARHGAP31Q2M1Z3 1444 aa5.77□□□□□ -1.49
PCDH9-201ENST00000377861 SLC12A5Q9H2X9 1139 aa5.77□□□□□ -1.49
PCDH9-201ENST00000377861 POGZQ7Z3K3 1410 aa5.77□□□□□ -1.49
PCDH9-201ENST00000377861 FKBP5Q13451 457 aaPredicted RBP5.77□□□□□ -1.49
PCDH9-201ENST00000377861 MYO1AQ9UBC5 1043 aa5.77□□□□□ -1.49
PCDH9-201ENST00000377861 TNMDQ9H2S6 317 aa5.77□□□□□ -1.49
PCDH9-201ENST00000377861 ANO2Q9NQ90 1003 aa5.77□□□□□ -1.49
PCDH9-201ENST00000377861 RAPGEF4Q8WZA2 1011 aa5.77□□□□□ -1.49
PCDH9-201ENST00000377861 FOXP2O15409 715 aa5.77□□□□□ -1.49
PCDH9-201ENST00000377861 TRIM5Q9C035 493 aa5.77□□□□□ -1.49
PCDH9-201ENST00000377861 RALYLQ86SE5 291 aaKnown RBP5.77□□□□□ -1.49
PCDH9-201ENST00000377861 CCDC12Q8WUD4 166 aaPredicted RBP5.77□□□□□ -1.49
PCDH9-201ENST00000377861 MKRN1Q9UHC7 482 aaKnown RBP5.77□□□□□ -1.49
PCDH9-201ENST00000377861 ECHDC1Q9NTX5 307 aa5.77□□□□□ -1.49
PCDH9-201ENST00000377861 GPR108Q9NPR9 543 aa5.77□□□□□ -1.49
PCDH9-201ENST00000377861 GIGYF1O75420 1035 aaPredicted RBP5.77□□□□□ -1.49
PCDH9-201ENST00000377861 LMBR1Q8WVP7 490 aa5.77□□□□□ -1.49
PCDH9-201ENST00000377861 TSPYL4Q9UJ04 414 aa5.77□□□□□ -1.49
PCDH9-201ENST00000377861 SPC24Q8NBT2 197 aa5.77□□□□□ -1.49
PCDH9-201ENST00000377861 CTCFLQ8NI51 663 aaPredicted RBP5.77□□□□□ -1.49
PCDH9-201ENST00000377861 UPF3BQ9BZI7 483 aaKnown RBP5.77□□□□□ -1.49
PCDH9-201ENST00000377861 GALNT17Q6IS24 598 aa5.76□□□□□ -1.49
PCDH9-201ENST00000377861 LEKR1Q6ZMV7 388 aa5.76□□□□□ -1.49
PCDH9-201ENST00000377861 AATKQ6ZMQ8 1374 aa5.76□□□□□ -1.49
PCDH9-201ENST00000377861 FCHSD1Q86WN1 690 aa5.76□□□□□ -1.49
PCDH9-201ENST00000377861 PLVAPQ9BX97 442 aa5.76□□□□□ -1.49
PCDH9-201ENST00000377861 SFPQP23246 707 aaKnown RBP eCLIP5.76□□□□□ -1.49
PCDH9-201ENST00000377861 FSD2A1L4K1 749 aa5.76□□□□□ -1.49
PCDH9-201ENST00000377861 TTC5Q8N0Z6 440 aa5.76□□□□□ -1.49
PCDH9-201ENST00000377861 FAM200AQ8TCP9 573 aa5.76□□□□□ -1.49
PCDH9-201ENST00000377861 CCDC51Q96ER9 411 aa5.76□□□□□ -1.49
PCDH9-201ENST00000377861 ZNF644Q9H582 1327 aaPredicted RBP5.76□□□□□ -1.49
PCDH9-201ENST00000377861 CALM1P0DP23 149 aa5.76□□□□□ -1.49
PCDH9-201ENST00000377861 CALM2P0DP24 149 aa5.76□□□□□ -1.49
PCDH9-201ENST00000377861 CALM3P0DP25 149 aa5.76□□□□□ -1.49
PCDH9-201ENST00000377861 NBPF1Q3BBV0 1214 aa5.76□□□□□ -1.49
PCDH9-201ENST00000377861 PPFIBP1Q86W92 1011 aa5.76□□□□□ -1.49
PCDH9-201ENST00000377861 UTP14CQ5TAP6 766 aaKnown RBP5.76□□□□□ -1.49
PCDH9-201ENST00000377861 PLEKHG2Q9H7P9 1386 aa5.76□□□□□ -1.49
PCDH9-201ENST00000377861 GNAQP50148 359 aa5.76□□□□□ -1.49
PCDH9-201ENST00000377861 DNAJC2Q99543 621 aaKnown RBP5.76□□□□□ -1.49
PCDH9-201ENST00000377861 ADGRL1O94910 1474 aa5.76□□□□□ -1.49
PCDH9-201ENST00000377861 SMAP1Q8IYB5 467 aaPredicted RBP5.76□□□□□ -1.49
PCDH9-201ENST00000377861 SSH1Q8WYL5 1049 aa5.76□□□□□ -1.49
PCDH9-201ENST00000377861 GBP1P32455 592 aa5.76□□□□□ -1.49
PCDH9-201ENST00000377861 PLCB2Q00722 1185 aa5.76□□□□□ -1.49
PCDH9-201ENST00000377861 FOXD1Q16676 465 aa5.76□□□□□ -1.49
PCDH9-201ENST00000377861 SPATA32Q96LK8 384 aa5.76□□□□□ -1.49
PCDH9-201ENST00000377861 PRPHP41219 470 aa5.76□□□□□ -1.49
PCDH9-201ENST00000377861 WASLO00401 505 aaPredicted RBP5.76□□□□□ -1.49
PCDH9-201ENST00000377861 CHL1O00533 1208 aa5.76□□□□□ -1.49
PCDH9-201ENST00000377861 GOLGA6L10A6NI86 522 aa5.76□□□□□ -1.49
PCDH9-201ENST00000377861 SURF6O75683 361 aaKnown RBP5.76□□□□□ -1.49
PCDH9-201ENST00000377861 CDK19Q9BWU1 502 aa5.76□□□□□ -1.49
PCDH9-201ENST00000377861 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms