RNA–Protein interactions for RNA: ENST00000377526.3

AUP1-201, Transcript of AUP1, lipid droplet regulating VLDL assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AUP1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AUP1-201ENST00000377526 PTF1AQ7RTS3 328 aa25.52■■□□□ 1.68
AUP1-201ENST00000377526 SYTL4Q96C24 671 aaPredicted RBP25.52■■□□□ 1.68
AUP1-201ENST00000377526 SPINK5Q9NQ38 1064 aaPredicted RBP25.52■■□□□ 1.68
AUP1-201ENST00000377526 PAPPAQ13219 1627 aa25.51■■□□□ 1.67
AUP1-201ENST00000377526 PIGBQ92521 554 aa25.51■■□□□ 1.67
AUP1-201ENST00000377526 TMOD3Q9NYL9 352 aa25.51■■□□□ 1.67
AUP1-201ENST00000377526 KDM3BQ7LBC6 1761 aa25.51■■□□□ 1.67
AUP1-201ENST00000377526 IL16Q14005 1332 aa25.5■■□□□ 1.67
AUP1-201ENST00000377526 CALD1Q05682 793 aaKnown RBP25.5■■□□□ 1.67
AUP1-201ENST00000377526 TAF7Q15545 349 aaPredicted RBP25.5■■□□□ 1.67
AUP1-201ENST00000377526 BTAF1O14981 1849 aa25.5■■□□□ 1.67
AUP1-201ENST00000377526 ZNF853P0CG23 659 aa25.49■■□□□ 1.67
AUP1-201ENST00000377526 CDCA7LQ96GN5 454 aa25.49■■□□□ 1.67
AUP1-201ENST00000377526 MIS18AQ9NYP9 233 aa25.49■■□□□ 1.67
AUP1-201ENST00000377526 LAS1LQ9Y4W2 734 aaKnown RBP25.49■■□□□ 1.67
AUP1-201ENST00000377526 GOLGA2Q08379 1002 aa25.48■■□□□ 1.67
AUP1-201ENST00000377526 CFAP44Q96MT7 982 aa25.48■■□□□ 1.67
AUP1-201ENST00000377526 IFT57Q9NWB7 429 aa25.48■■□□□ 1.67
AUP1-201ENST00000377526 BTBD11A6QL63 1104 aa25.46■■□□□ 1.67
AUP1-201ENST00000377526 CHL1O00533 1208 aa25.46■■□□□ 1.67
AUP1-201ENST00000377526 TRIM37O94972 964 aa25.45■■□□□ 1.67
AUP1-201ENST00000377526 GNAI1P63096 354 aa25.45■■□□□ 1.67
AUP1-201ENST00000377526 SLC39A6Q13433 755 aa25.45■■□□□ 1.67
AUP1-201ENST00000377526 TNS1Q9HBL0 1735 aaKnown RBP25.45■■□□□ 1.66
AUP1-201ENST00000377526 UBR2Q8IWV8 1755 aa25.45■■□□□ 1.66
AUP1-201ENST00000377526 TSR2Q969E8 191 aaKnown RBP25.45■■□□□ 1.66
AUP1-201ENST00000377526 MBIPQ9NS73 344 aa25.45■■□□□ 1.66
AUP1-201ENST00000377526 TSPYL4Q9UJ04 414 aa25.45■■□□□ 1.66
AUP1-201ENST00000377526 KCNQ3O43525 872 aa25.44■■□□□ 1.66
AUP1-201ENST00000377526 SLFN5Q08AF3 891 aa25.44■■□□□ 1.66
AUP1-201ENST00000377526 BCL11BQ9C0K0 894 aaPredicted RBP25.44■■□□□ 1.66
AUP1-201ENST00000377526 ASAP1Q9ULH1 1129 aa25.44■■□□□ 1.66
AUP1-201ENST00000377526 BABAM1Q9NWV8 329 aa25.43■■□□□ 1.66
AUP1-201ENST00000377526 FANCIQ9NVI1 1328 aa25.42■■□□□ 1.66
AUP1-201ENST00000377526 ATG3Q9NT62 314 aa25.42■■□□□ 1.66
AUP1-201ENST00000377526 KCPQ6ZWJ8 1503 aa25.42■■□□□ 1.66
AUP1-201ENST00000377526 E9PSI1 815 aa25.42■■□□□ 1.66
AUP1-201ENST00000377526 ZNF790Q6PG37 636 aa25.42■■□□□ 1.66
AUP1-201ENST00000377526 TRMT2AQ8IZ69 625 aaKnown RBP25.4■■□□□ 1.66
AUP1-201ENST00000377526 MYH16Q9H6N6 1097 aa25.39■■□□□ 1.66
AUP1-201ENST00000377526 DUSP27Q5VZP5 1158 aa25.38■■□□□ 1.65
AUP1-201ENST00000377526 ILDR2Q71H61 639 aa25.38■■□□□ 1.65
AUP1-201ENST00000377526 LY75O60449 1722 aa25.36■■□□□ 1.65
AUP1-201ENST00000377526 EIF4A1P60842 406 aaKnown RBP25.36■■□□□ 1.65
AUP1-201ENST00000377526 TTC5Q8N0Z6 440 aa25.36■■□□□ 1.65
AUP1-201ENST00000377526 PALLDQ8WX93 1383 aa25.36■■□□□ 1.65
AUP1-201ENST00000377526 KRT24Q2M2I5 525 aa25.36■■□□□ 1.65
AUP1-201ENST00000377526 ZNF496Q96IT1 587 aaPredicted RBP25.36■■□□□ 1.65
AUP1-201ENST00000377526 C5P01031 1676 aa25.34■■□□□ 1.65
AUP1-201ENST00000377526 PTCD1O75127 700 aaKnown RBP25.34■■□□□ 1.65
AUP1-201ENST00000377526 SMARCC1Q92922 1105 aaPredicted RBP25.33■■□□□ 1.65
AUP1-201ENST00000377526 HEG1Q9ULI3 1381 aa25.33■■□□□ 1.65
AUP1-201ENST00000377526 EXOSC9Q06265 439 aaKnown RBP25.32■■□□□ 1.64
AUP1-201ENST00000377526 C8orf58Q8NAV2 365 aa25.32■■□□□ 1.64
AUP1-201ENST00000377526 FMNL2Q96PY5 1086 aa25.32■■□□□ 1.64
AUP1-201ENST00000377526 SLC4A9Q96Q91 983 aa25.32■■□□□ 1.64
AUP1-201ENST00000377526 TJP1Q07157 1748 aa25.31■■□□□ 1.64
AUP1-201ENST00000377526 APBA3O96018 575 aa25.31■■□□□ 1.64
AUP1-201ENST00000377526 RBM42Q9BTD8 480 aaKnown RBP25.31■■□□□ 1.64
AUP1-201ENST00000377526 TSPYL6Q8N831 410 aa25.3■■□□□ 1.64
AUP1-201ENST00000377526 ZNF831Q5JPB2 1677 aa25.3■■□□□ 1.64
AUP1-201ENST00000377526 PRAMEF22A3QJZ6 481 aa25.29■■□□□ 1.64
AUP1-201ENST00000377526 RGPD3A6NKT7 1758 aaPredicted RBP25.29■■□□□ 1.64
AUP1-201ENST00000377526 RGPD4Q7Z3J3 1758 aa25.29■■□□□ 1.64
AUP1-201ENST00000377526 CICQ96RK0 1608 aaPredicted RBP25.29■■□□□ 1.64
AUP1-201ENST00000377526 LOC102724428A0A0B4J2F2 783 aa25.29■■□□□ 1.64
AUP1-201ENST00000377526 SIK1P57059 783 aa25.29■■□□□ 1.64
AUP1-201ENST00000377526 LAMB4A4D0S4 1761 aa25.28■■□□□ 1.64
AUP1-201ENST00000377526 ELL2O00472 640 aaPredicted RBP25.27■■□□□ 1.64
AUP1-201ENST00000377526 GIGYF1O75420 1035 aaPredicted RBP25.27■■□□□ 1.64
AUP1-201ENST00000377526 PLSCR1O15162 318 aa25.26■■□□□ 1.63
AUP1-201ENST00000377526 KCNQ4P56696 695 aa25.26■■□□□ 1.63
AUP1-201ENST00000377526 SNRPA1P09661 255 aaKnown RBP25.25■■□□□ 1.63
AUP1-201ENST00000377526 VSIG10Q8N0Z9 540 aa25.25■■□□□ 1.63
AUP1-201ENST00000377526 COL5A3P25940 1745 aaPredicted RBP25.24■■□□□ 1.63
AUP1-201ENST00000377526 ITPK1Q13572 414 aa25.24■■□□□ 1.63
AUP1-201ENST00000377526 TWISTNBQ3B726 338 aaPredicted RBP25.24■■□□□ 1.63
AUP1-201ENST00000377526 TAF1LQ8IZX4 1826 aa25.24■■□□□ 1.63
AUP1-201ENST00000377526 ATP6V1AP38606 617 aa25.23■■□□□ 1.63
AUP1-201ENST00000377526 DNAJC10Q8IXB1 793 aa25.23■■□□□ 1.63
AUP1-201ENST00000377526 PROM2Q8N271 834 aa25.23■■□□□ 1.63
AUP1-201ENST00000377526 SF3B2Q13435 895 aaKnown RBP25.23■■□□□ 1.63
AUP1-201ENST00000377526 UPF1Q92900 1129 aaKnown RBP eCLIP25.23■■□□□ 1.63
AUP1-201ENST00000377526 CCNL1Q9UK58 526 aaPredicted RBP25.23■■□□□ 1.63
AUP1-201ENST00000377526 VAMP4O75379 141 aa25.22■■□□□ 1.63
AUP1-201ENST00000377526 LRRC4BQ9NT99 713 aa25.22■■□□□ 1.63
AUP1-201ENST00000377526 USP16Q9Y5T5 823 aa25.22■■□□□ 1.63
AUP1-201ENST00000377526 HOXB7P09629 217 aa25.21■■□□□ 1.63
AUP1-201ENST00000377526 EN1Q05925 392 aaPredicted RBP25.21■■□□□ 1.63
AUP1-201ENST00000377526 TXNRD1Q16881 649 aa25.21■■□□□ 1.63
AUP1-201ENST00000377526 DEFB132Q7Z7B7 95 aa25.21■■□□□ 1.63
AUP1-201ENST00000377526 CCDC125Q86Z20 511 aa25.21■■□□□ 1.63
AUP1-201ENST00000377526 RREB1Q92766 1687 aa25.2■■□□□ 1.62
AUP1-201ENST00000377526 CAMKK2Q96RR4 588 aa25.2■■□□□ 1.62
AUP1-201ENST00000377526 SOS1Q07889 1333 aaPredicted RBP25.19■■□□□ 1.62
AUP1-201ENST00000377526 BAG6P46379 1132 aa25.19■■□□□ 1.62
AUP1-201ENST00000377526 EIF2S2P20042 333 aaKnown RBP25.18■■□□□ 1.62
AUP1-201ENST00000377526 EZH2Q15910 746 aaKnown RBP25.18■■□□□ 1.62
AUP1-201ENST00000377526 SLC27A3Q5K4L6 730 aa25.18■■□□□ 1.62
AUP1-201ENST00000377526 LINC00116Q8NCU8 138 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms