RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 ASXL1Q8IXJ9 1541 aa10.31□□□□□ -0.76
CRNKL1-202ENST00000377340 C20orf194Q5TEA3 1177 aa10.3□□□□□ -0.76
CRNKL1-202ENST00000377340 DZIP3Q86Y13 1208 aaKnown RBP10.3□□□□□ -0.76
CRNKL1-202ENST00000377340 LRRFIP2Q9Y608 721 aaKnown RBP10.3□□□□□ -0.76
CRNKL1-202ENST00000377340 PLA2R1Q13018 1463 aa10.3□□□□□ -0.76
CRNKL1-202ENST00000377340 IDH1O75874 414 aaKnown RBP10.3□□□□□ -0.76
CRNKL1-202ENST00000377340 ATP2B2Q01814 1243 aa10.3□□□□□ -0.76
CRNKL1-202ENST00000377340 RRP12Q5JTH9 1297 aaKnown RBP10.3□□□□□ -0.76
CRNKL1-202ENST00000377340 TSPYL6Q8N831 410 aa10.3□□□□□ -0.76
CRNKL1-202ENST00000377340 IL13P35225 146 aa10.3□□□□□ -0.76
CRNKL1-202ENST00000377340 LDHAL6AQ6ZMR3 332 aa10.3□□□□□ -0.76
CRNKL1-202ENST00000377340 RAI14Q9P0K7 980 aa10.3□□□□□ -0.76
CRNKL1-202ENST00000377340 SPATA31E1Q6ZUB1 1445 aa10.3□□□□□ -0.76
CRNKL1-202ENST00000377340 MARCH6O60337 910 aa10.3□□□□□ -0.76
CRNKL1-202ENST00000377340 KDM4AO75164 1064 aa10.3□□□□□ -0.76
CRNKL1-202ENST00000377340 TRIM37O94972 964 aa10.3□□□□□ -0.76
CRNKL1-202ENST00000377340 SYNE3Q6ZMZ3 975 aa10.3□□□□□ -0.76
CRNKL1-202ENST00000377340 CDCA7Q9BWT1 371 aaPredicted RBP10.3□□□□□ -0.76
CRNKL1-202ENST00000377340 LRP2BPQ9P2M1 347 aa10.3□□□□□ -0.76
CRNKL1-202ENST00000377340 A1BGP04217 495 aa10.29□□□□□ -0.76
CRNKL1-202ENST00000377340 LRRCC1Q9C099 1032 aa10.29□□□□□ -0.76
CRNKL1-202ENST00000377340 DDX46Q7L014 1031 aaKnown RBP10.29□□□□□ -0.76
CRNKL1-202ENST00000377340 NUTM1Q86Y26 1132 aa10.29□□□□□ -0.76
CRNKL1-202ENST00000377340 PDZRN3Q9UPQ7 1066 aa10.29□□□□□ -0.76
CRNKL1-202ENST00000377340 ARAP3Q8WWN8 1544 aa10.29□□□□□ -0.76
CRNKL1-202ENST00000377340 SBNO1A3KN83 1393 aa10.29□□□□□ -0.76
CRNKL1-202ENST00000377340 A2ML1A8K2U0 1454 aa10.29□□□□□ -0.76
CRNKL1-202ENST00000377340 AKAP17AQ02040 695 aaKnown RBP10.29□□□□□ -0.76
CRNKL1-202ENST00000377340 NFXL1Q6ZNB6 911 aa10.29□□□□□ -0.76
CRNKL1-202ENST00000377340 CWC25Q9NXE8 425 aaPredicted RBP10.29□□□□□ -0.76
CRNKL1-202ENST00000377340 PODXL2Q9NZ53 605 aa10.29□□□□□ -0.76
CRNKL1-202ENST00000377340 ABCA9Q8IUA7 1624 aa10.28□□□□□ -0.76
CRNKL1-202ENST00000377340 REC8O95072 547 aa10.28□□□□□ -0.76
CRNKL1-202ENST00000377340 IKQ13123 557 aaPredicted RBP10.28□□□□□ -0.76
CRNKL1-202ENST00000377340 ERC1Q8IUD2 1116 aa10.28□□□□□ -0.76
CRNKL1-202ENST00000377340 DNAJC10Q8IXB1 793 aa10.28□□□□□ -0.76
CRNKL1-202ENST00000377340 CDK11BP21127 795 aaKnown RBP10.28□□□□□ -0.76
CRNKL1-202ENST00000377340 BAG6P46379 1132 aa10.28□□□□□ -0.76
CRNKL1-202ENST00000377340 ZNF790Q6PG37 636 aa10.28□□□□□ -0.76
CRNKL1-202ENST00000377340 PPP1R42Q7Z4L9 355 aa10.28□□□□□ -0.76
CRNKL1-202ENST00000377340 RSPH6AQ9H0K4 717 aa10.28□□□□□ -0.76
CRNKL1-202ENST00000377340 STK32BQ9NY57 414 aa10.28□□□□□ -0.76
CRNKL1-202ENST00000377340 PTPRTO14522 1441 aa10.28□□□□□ -0.76
CRNKL1-202ENST00000377340 TRIM27P14373 513 aa10.28□□□□□ -0.76
CRNKL1-202ENST00000377340 HSPA1LP34931 641 aa10.28□□□□□ -0.76
CRNKL1-202ENST00000377340 TRAPPC3LQ5T215 181 aa10.28□□□□□ -0.76
CRNKL1-202ENST00000377340 RALYLQ86SE5 291 aaKnown RBP10.28□□□□□ -0.76
CRNKL1-202ENST00000377340 CWC22Q9HCG8 908 aaKnown RBP10.28□□□□□ -0.76
CRNKL1-202ENST00000377340 ARHGEF25Q86VW2 580 aa10.27□□□□□ -0.76
CRNKL1-202ENST00000377340 RASSF8Q8NHQ8 419 aa10.27□□□□□ -0.76
CRNKL1-202ENST00000377340 CCDC8Q9H0W5 538 aaPredicted RBP10.27□□□□□ -0.76
CRNKL1-202ENST00000377340 SMARCA5O60264 1052 aaPredicted RBP10.27□□□□□ -0.77
CRNKL1-202ENST00000377340 IQSEC3Q9UPP2 1182 aaPredicted RBP10.27□□□□□ -0.77
CRNKL1-202ENST00000377340 ST18O60284 1047 aa10.27□□□□□ -0.77
CRNKL1-202ENST00000377340 PDE4AP27815 886 aa10.27□□□□□ -0.77
CRNKL1-202ENST00000377340 POLD1P28340 1107 aa10.27□□□□□ -0.77
CRNKL1-202ENST00000377340 EIF2AK4Q9P2K8 1649 aaKnown RBP10.27□□□□□ -0.77
CRNKL1-202ENST00000377340 ANKRD18BA2A2Z9 1011 aa10.27□□□□□ -0.77
CRNKL1-202ENST00000377340 CPLX1O14810 134 aa10.27□□□□□ -0.77
CRNKL1-202ENST00000377340 CNTROBQ8N137 903 aa10.27□□□□□ -0.77
CRNKL1-202ENST00000377340 ZNF496Q96IT1 587 aaPredicted RBP10.27□□□□□ -0.77
CRNKL1-202ENST00000377340 NLRP3Q96P20 1036 aa10.27□□□□□ -0.77
CRNKL1-202ENST00000377340 IFIT1P09914 478 aaKnown RBP10.26□□□□□ -0.77
CRNKL1-202ENST00000377340 CWF19L2Q2TBE0 894 aaKnown RBP10.26□□□□□ -0.77
CRNKL1-202ENST00000377340 ZNF772Q68DY9 489 aaPredicted RBP10.26□□□□□ -0.77
CRNKL1-202ENST00000377340 SNRKQ9NRH2 765 aa10.26□□□□□ -0.77
CRNKL1-202ENST00000377340 RBM19Q9Y4C8 960 aaKnown RBP10.26□□□□□ -0.77
CRNKL1-202ENST00000377340 MAP3K5Q99683 1374 aa10.26□□□□□ -0.77
CRNKL1-202ENST00000377340 ADGBQ8N7X0 1667 aa10.26□□□□□ -0.77
CRNKL1-202ENST00000377340 FOSBP53539 338 aa10.26□□□□□ -0.77
CRNKL1-202ENST00000377340 MSL1Q68DK7 614 aa10.26□□□□□ -0.77
CRNKL1-202ENST00000377340 PHAXQ9H814 394 aaKnown RBP10.26□□□□□ -0.77
CRNKL1-202ENST00000377340 SETD1BQ9UPS6 1966 aaKnown RBP10.26□□□□□ -0.77
CRNKL1-202ENST00000377340 ARHGAP31Q2M1Z3 1444 aa10.26□□□□□ -0.77
CRNKL1-202ENST00000377340 RNF20Q5VTR2 975 aa10.25□□□□□ -0.77
CRNKL1-202ENST00000377340 TPTE2Q6XPS3 522 aa10.25□□□□□ -0.77
CRNKL1-202ENST00000377340 FAM184AQ8NB25 1140 aa10.25□□□□□ -0.77
CRNKL1-202ENST00000377340 BOLA2Q9H3K6 86 aa10.25□□□□□ -0.77
CRNKL1-202ENST00000377340 PTPRMP28827 1452 aa10.25□□□□□ -0.77
CRNKL1-202ENST00000377340 PIK3C2GO75747 1445 aa10.25□□□□□ -0.77
CRNKL1-202ENST00000377340 ERICH2A1L162 156 aa10.25□□□□□ -0.77
CRNKL1-202ENST00000377340 ST5P78524 1137 aa10.25□□□□□ -0.77
CRNKL1-202ENST00000377340 CAVIN4Q5BKX8 364 aa10.25□□□□□ -0.77
CRNKL1-202ENST00000377340 MCTP1Q6DN14 999 aa10.25□□□□□ -0.77
CRNKL1-202ENST00000377340 ALDH1L2Q3SY69 923 aa10.25□□□□□ -0.77
CRNKL1-202ENST00000377340 SEPT12Q8IYM1 358 aa10.25□□□□□ -0.77
CRNKL1-202ENST00000377340 PARP3Q9Y6F1 533 aa10.25□□□□□ -0.77
CRNKL1-202ENST00000377340 CDC42BPBQ9Y5S2 1711 aa10.25□□□□□ -0.77
CRNKL1-202ENST00000377340 INTS3Q68E01 1043 aaKnown RBP10.25□□□□□ -0.77
CRNKL1-202ENST00000377340 CPLX2Q6PUV4 134 aaKnown RBP10.25□□□□□ -0.77
CRNKL1-202ENST00000377340 RPAP2Q8IXW5 612 aaPredicted RBP10.25□□□□□ -0.77
CRNKL1-202ENST00000377340 NSFL1CQ9UNZ2 370 aaKnown RBP10.25□□□□□ -0.77
CRNKL1-202ENST00000377340 AFF2P51816 1311 aa10.24□□□□□ -0.77
CRNKL1-202ENST00000377340 POLR3AO14802 1390 aaPredicted RBP10.24□□□□□ -0.77
CRNKL1-202ENST00000377340 PARD3Q8TEW0 1356 aa10.24□□□□□ -0.77
CRNKL1-202ENST00000377340 LMBR1LQ6UX01 489 aa10.24□□□□□ -0.77
CRNKL1-202ENST00000377340 HELBQ8NG08 1087 aaPredicted RBP10.24□□□□□ -0.77
CRNKL1-202ENST00000377340 KCNQ3O43525 872 aa10.24□□□□□ -0.77
CRNKL1-202ENST00000377340 PAXIP1Q6ZW49 1069 aaPredicted RBP10.24□□□□□ -0.77
CRNKL1-202ENST00000377340 GCC1Q96CN9 775 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms