RNA–Protein interactions for RNA: ENST00000377069.8

KDM2B-201, Transcript of lysine demethylase 2B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene KDM2B, Length 5,224 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-201ENST00000377069 BMP2KQ9NSY1 1161 aaPredicted RBP17.29■□□□□ 0.36
KDM2B-201ENST00000377069 SEPT11Q9NVA2 429 aaKnown RBP17.29■□□□□ 0.36
KDM2B-201ENST00000377069 PSME1Q06323 249 aa17.29■□□□□ 0.36
KDM2B-201ENST00000377069 TMEM132EQ6IEE7 984 aa17.29■□□□□ 0.36
KDM2B-201ENST00000377069 CCDC57Q2TAC2 916 aa17.29■□□□□ 0.36
KDM2B-201ENST00000377069 ZSCAN23Q3MJ62 389 aa17.29■□□□□ 0.36
KDM2B-201ENST00000377069 CNKSR2Q8WXI2 1034 aa17.29■□□□□ 0.36
KDM2B-201ENST00000377069 PANK2Q9BZ23 570 aa17.28■□□□□ 0.36
KDM2B-201ENST00000377069 GDPD2Q9HCC8 539 aa17.28■□□□□ 0.36
KDM2B-201ENST00000377069 ZNF165P49910 485 aa17.28■□□□□ 0.36
KDM2B-201ENST00000377069 PRDM2Q13029 1718 aa17.28■□□□□ 0.36
KDM2B-201ENST00000377069 CCDC91Q7Z6B0 441 aa17.28■□□□□ 0.36
KDM2B-201ENST00000377069 WASF1Q92558 559 aa17.28■□□□□ 0.36
KDM2B-201ENST00000377069 SYTL4Q96C24 671 aaPredicted RBP17.28■□□□□ 0.36
KDM2B-201ENST00000377069 IVLP07476 585 aa17.28■□□□□ 0.36
KDM2B-201ENST00000377069 CFAP70Q5T0N1 1121 aa17.28■□□□□ 0.36
KDM2B-201ENST00000377069 HMGXB3Q12766 1538 aa17.28■□□□□ 0.36
KDM2B-201ENST00000377069 LRSAM1Q6UWE0 723 aa17.27■□□□□ 0.36
KDM2B-201ENST00000377069 TMC6Q7Z403 805 aa17.27■□□□□ 0.36
KDM2B-201ENST00000377069 RBM27Q9P2N5 1060 aaKnown RBP17.27■□□□□ 0.36
KDM2B-201ENST00000377069 ZKSCAN5Q9Y2L8 839 aa17.27■□□□□ 0.36
KDM2B-201ENST00000377069 SPECC1Q5M775 1068 aa17.27■□□□□ 0.36
KDM2B-201ENST00000377069 TBC1D32Q96NH3 1257 aa17.27■□□□□ 0.36
KDM2B-201ENST00000377069 CEP131Q9UPN4 1083 aa17.27■□□□□ 0.36
KDM2B-201ENST00000377069 TOPBP1Q92547 1522 aa17.27■□□□□ 0.35
KDM2B-201ENST00000377069 POLA1P09884 1462 aaPredicted RBP17.27■□□□□ 0.35
KDM2B-201ENST00000377069 CAVIN2O95810 425 aa17.27■□□□□ 0.35
KDM2B-201ENST00000377069 KLHL10Q6JEL2 608 aa17.27■□□□□ 0.35
KDM2B-201ENST00000377069 ZFP91Q96JP5 570 aaPredicted RBP17.27■□□□□ 0.35
KDM2B-201ENST00000377069 CCDC171Q6TFL3 1326 aa17.27■□□□□ 0.35
KDM2B-201ENST00000377069 CCDC94Q9BW85 323 aaPredicted RBP17.26■□□□□ 0.35
KDM2B-201ENST00000377069 EXOC6BQ9Y2D4 811 aa17.26■□□□□ 0.35
KDM2B-201ENST00000377069 IRX3P78415 501 aaPredicted RBP17.26■□□□□ 0.35
KDM2B-201ENST00000377069 MX1P20591 662 aa17.26■□□□□ 0.35
KDM2B-201ENST00000377069 BCCIPQ9P287 314 aaKnown RBP eCLIP17.26■□□□□ 0.35
KDM2B-201ENST00000377069 LIMCH1Q9UPQ0 1083 aa17.26■□□□□ 0.35
KDM2B-201ENST00000377069 HCLS1P14317 486 aaPredicted RBP17.25■□□□□ 0.35
KDM2B-201ENST00000377069 PRPF40BQ6NWY9 871 aaKnown RBP17.25■□□□□ 0.35
KDM2B-201ENST00000377069 SLC12A5Q9H2X9 1139 aa17.25■□□□□ 0.35
KDM2B-201ENST00000377069 USO1O60763 962 aaKnown RBP17.25■□□□□ 0.35
KDM2B-201ENST00000377069 TMX1Q9H3N1 280 aa17.25■□□□□ 0.35
KDM2B-201ENST00000377069 SSBP05455 408 aaKnown RBP eCLIP17.25■□□□□ 0.35
KDM2B-201ENST00000377069 NF2P35240 595 aa17.25■□□□□ 0.35
KDM2B-201ENST00000377069 STX1AQ16623 288 aa17.25■□□□□ 0.35
KDM2B-201ENST00000377069 SOGA3Q5TF21 947 aa17.25■□□□□ 0.35
KDM2B-201ENST00000377069 ARFGAP3Q9NP61 516 aa17.25■□□□□ 0.35
KDM2B-201ENST00000377069 ZSCAN25Q6NSZ9 544 aa17.24■□□□□ 0.35
KDM2B-201ENST00000377069 NLRP6P59044 892 aa17.24■□□□□ 0.35
KDM2B-201ENST00000377069 RARSP54136 660 aaKnown RBP17.24■□□□□ 0.35
KDM2B-201ENST00000377069 GNG11P61952 73 aa17.24■□□□□ 0.35
KDM2B-201ENST00000377069 CPLX3Q8WVH0 158 aa17.24■□□□□ 0.35
KDM2B-201ENST00000377069 GCOM1H8Y6P7 765 aaPredicted RBP17.24■□□□□ 0.35
KDM2B-201ENST00000377069 MYZAPP0CAP1 466 aa17.24■□□□□ 0.35
KDM2B-201ENST00000377069 UBE2HP62256 183 aa17.24■□□□□ 0.35
KDM2B-201ENST00000377069 FKBP15Q5T1M5 1219 aa17.24■□□□□ 0.35
KDM2B-201ENST00000377069 ZNF830Q96NB3 372 aaPredicted RBP17.24■□□□□ 0.35
KDM2B-201ENST00000377069 RSPH14Q9UHP6 348 aa17.24■□□□□ 0.35
KDM2B-201ENST00000377069 YEATS4O95619 227 aa17.23■□□□□ 0.35
KDM2B-201ENST00000377069 SULT6B1Q6IMI4 303 aa17.23■□□□□ 0.35
KDM2B-201ENST00000377069 NUTM1Q86Y26 1132 aa17.23■□□□□ 0.35
KDM2B-201ENST00000377069 CCDC150Q8NCX0 1101 aa17.23■□□□□ 0.35
KDM2B-201ENST00000377069 NAA15Q9BXJ9 866 aaKnown RBP17.23■□□□□ 0.35
KDM2B-201ENST00000377069 GLRX3O76003 335 aaKnown RBP17.23■□□□□ 0.35
KDM2B-201ENST00000377069 SPECC1LQ69YQ0 1117 aa17.23■□□□□ 0.35
KDM2B-201ENST00000377069 NLRP2Q9NX02 1062 aa17.23■□□□□ 0.35
KDM2B-201ENST00000377069 NUP88Q99567 741 aaPredicted RBP17.23■□□□□ 0.35
KDM2B-201ENST00000377069 CNNM1Q9NRU3 951 aa17.23■□□□□ 0.35
KDM2B-201ENST00000377069 ZSWIM4Q9H7M6 989 aa17.23■□□□□ 0.35
KDM2B-201ENST00000377069 HLTFQ14527 1009 aaKnown RBP eCLIP17.22■□□□□ 0.35
KDM2B-201ENST00000377069 UBAC1Q9BSL1 405 aa17.22■□□□□ 0.35
KDM2B-201ENST00000377069 CC2D2AQ9P2K1 1620 aa17.22■□□□□ 0.35
KDM2B-201ENST00000377069 RAB11FIP3O75154 756 aa17.22■□□□□ 0.35
KDM2B-201ENST00000377069 FSIP1Q8NA03 581 aa17.22■□□□□ 0.35
KDM2B-201ENST00000377069 CCDC12Q8WUD4 166 aaPredicted RBP17.22■□□□□ 0.35
KDM2B-201ENST00000377069 STX6O43752 255 aa17.22■□□□□ 0.35
KDM2B-201ENST00000377069 FKBP4Q02790 459 aaKnown RBP eCLIP17.22■□□□□ 0.35
KDM2B-201ENST00000377069 CACNA2D4Q7Z3S7 1137 aa17.22■□□□□ 0.35
KDM2B-201ENST00000377069 WDR97A6NE52 1622 aa17.21■□□□□ 0.35
KDM2B-201ENST00000377069 CCDC178Q5BJE1 867 aa17.21■□□□□ 0.35
KDM2B-201ENST00000377069 GIGYF2Q6Y7W6 1299 aaKnown RBP17.21■□□□□ 0.35
KDM2B-201ENST00000377069 PLEKHO1Q53GL0 409 aaPredicted RBP17.21■□□□□ 0.35
KDM2B-201ENST00000377069 TMEM132AQ24JP5 1023 aa17.21■□□□□ 0.35
KDM2B-201ENST00000377069 HS1BP3Q53T59 392 aa17.21■□□□□ 0.35
KDM2B-201ENST00000377069 KIF1BPQ96EK5 621 aa17.21■□□□□ 0.35
KDM2B-201ENST00000377069 C8orf76Q96K31 380 aa17.21■□□□□ 0.34
KDM2B-201ENST00000377069 GOPCQ9HD26 462 aa17.21■□□□□ 0.34
KDM2B-201ENST00000377069 SMARCA5O60264 1052 aaPredicted RBP17.2■□□□□ 0.34
KDM2B-201ENST00000377069 HSPA4P34932 840 aa17.2■□□□□ 0.34
KDM2B-201ENST00000377069 CETN2P41208 172 aa17.2■□□□□ 0.34
KDM2B-201ENST00000377069 GSTTP1A0A1W2PQM5 241 aa17.2■□□□□ 0.34
KDM2B-201ENST00000377069 DNA2P51530 1060 aa17.2■□□□□ 0.34
KDM2B-201ENST00000377069 FAM69CQ0P6D2 419 aa17.2■□□□□ 0.34
KDM2B-201ENST00000377069 TFIP11Q9UBB9 837 aaKnown RBP17.2■□□□□ 0.34
KDM2B-201ENST00000377069 U3KPZ7 1027 aaPredicted RBP17.2■□□□□ 0.34
KDM2B-201ENST00000377069 LRPPRCP42704 1394 aaKnown RBP17.2■□□□□ 0.34
KDM2B-201ENST00000377069 BMP2KLQ5H9B9 411 aa17.2■□□□□ 0.34
KDM2B-201ENST00000377069 SSH1Q8WYL5 1049 aa17.2■□□□□ 0.34
KDM2B-201ENST00000377069 GNL3LQ9NVN8 582 aaKnown RBP17.2■□□□□ 0.34
KDM2B-201ENST00000377069 EFCAB5A4FU69 1503 aa17.19■□□□□ 0.34
KDM2B-201ENST00000377069 SMAP1Q8IYB5 467 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms