RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 HMGN5P82970 282 aaKnown RBP12.97□□□□□ -0.33
MDC1-201ENST00000376406 C14orf93Q9H972 538 aaKnown RBP12.97□□□□□ -0.33
MDC1-201ENST00000376406 CWC27Q6UX04 472 aaKnown RBP12.97□□□□□ -0.33
MDC1-201ENST00000376406 AK7Q96M32 723 aa12.97□□□□□ -0.33
MDC1-201ENST00000376406 LARP1BQ659C4 914 aaKnown RBP12.97□□□□□ -0.33
MDC1-201ENST00000376406 ADAMTS2O95450 1211 aa12.97□□□□□ -0.33
MDC1-201ENST00000376406 EPS15P42566 896 aa12.97□□□□□ -0.33
MDC1-201ENST00000376406 RBM5P52756 815 aaKnown RBP eCLIP12.97□□□□□ -0.33
MDC1-201ENST00000376406 NEO1Q92859 1461 aa12.97□□□□□ -0.33
MDC1-201ENST00000376406 FAM177BA6PVY3 158 aa12.96□□□□□ -0.33
MDC1-201ENST00000376406 TRIM22Q8IYM9 498 aa12.96□□□□□ -0.33
MDC1-201ENST00000376406 IL16Q14005 1332 aa12.96□□□□□ -0.33
MDC1-201ENST00000376406 FOXO3O43524 673 aa12.96□□□□□ -0.33
MDC1-201ENST00000376406 BLOC1S2Q6QNY1 142 aa12.96□□□□□ -0.33
MDC1-201ENST00000376406 RPGRQ92834 1020 aaKnown RBP12.96□□□□□ -0.33
MDC1-201ENST00000376406 SMARCE1Q969G3 411 aa12.96□□□□□ -0.33
MDC1-201ENST00000376406 WAPLQ7Z5K2 1190 aa12.96□□□□□ -0.33
MDC1-201ENST00000376406 CDKL5O76039 1030 aa12.96□□□□□ -0.33
MDC1-201ENST00000376406 MX1P20591 662 aa12.96□□□□□ -0.33
MDC1-201ENST00000376406 STK3Q13188 491 aa12.96□□□□□ -0.34
MDC1-201ENST00000376406 FILIP1LQ4L180 1135 aa12.96□□□□□ -0.34
MDC1-201ENST00000376406 KIF1BPQ96EK5 621 aa12.96□□□□□ -0.34
MDC1-201ENST00000376406 CFAP45Q9UL16 551 aa12.96□□□□□ -0.34
MDC1-201ENST00000376406 DACH1Q9UI36 760 aa12.96□□□□□ -0.34
MDC1-201ENST00000376406 RDXP35241 583 aaKnown RBP12.95□□□□□ -0.34
MDC1-201ENST00000376406 PIP4K2AP48426 406 aaPredicted RBP12.95□□□□□ -0.34
MDC1-201ENST00000376406 MCM10Q7L590 875 aa12.95□□□□□ -0.34
MDC1-201ENST00000376406 JAKMIP1Q96N16 626 aaKnown RBP12.95□□□□□ -0.34
MDC1-201ENST00000376406 FMNL2Q96PY5 1086 aa12.95□□□□□ -0.34
MDC1-201ENST00000376406 MAST1Q9Y2H9 1570 aa12.95□□□□□ -0.34
MDC1-201ENST00000376406 CEP170Q5SW79 1584 aa12.95□□□□□ -0.34
MDC1-201ENST00000376406 CDK5RAP3Q96JB5 506 aa12.95□□□□□ -0.34
MDC1-201ENST00000376406 RUFY1Q96T51 708 aa12.95□□□□□ -0.34
MDC1-201ENST00000376406 DNAI2Q9GZS0 605 aa12.95□□□□□ -0.34
MDC1-201ENST00000376406 ATP7AQ04656 1500 aa12.95□□□□□ -0.34
MDC1-201ENST00000376406 SETD1BQ9UPS6 1966 aaKnown RBP12.95□□□□□ -0.34
MDC1-201ENST00000376406 CCDC69A6NI79 296 aa12.95□□□□□ -0.34
MDC1-201ENST00000376406 IFIT1P09914 478 aaKnown RBP12.94□□□□□ -0.34
MDC1-201ENST00000376406 CEBPZQ03701 1054 aaKnown RBP12.94□□□□□ -0.34
MDC1-201ENST00000376406 IFNL2Q8IZJ0 200 aa12.94□□□□□ -0.34
MDC1-201ENST00000376406 PUS7Q96PZ0 661 aaKnown RBP12.94□□□□□ -0.34
MDC1-201ENST00000376406 NAP1L1P55209 391 aaKnown RBP12.94□□□□□ -0.34
MDC1-201ENST00000376406 SPATA32Q96LK8 384 aa12.94□□□□□ -0.34
MDC1-201ENST00000376406 CASTP20810 708 aaKnown RBP12.94□□□□□ -0.34
MDC1-201ENST00000376406 C19orf44Q9H6X5 657 aa12.94□□□□□ -0.34
MDC1-201ENST00000376406 MAGEC2Q9UBF1 373 aaPredicted RBP12.93□□□□□ -0.34
MDC1-201ENST00000376406 XPCQ01831 940 aaPredicted RBP12.93□□□□□ -0.34
MDC1-201ENST00000376406 TRIM27P14373 513 aa12.93□□□□□ -0.34
MDC1-201ENST00000376406 RRP12Q5JTH9 1297 aaKnown RBP12.93□□□□□ -0.34
MDC1-201ENST00000376406 PARD3Q8TEW0 1356 aa12.93□□□□□ -0.34
MDC1-201ENST00000376406 FBXO31Q5XUX0 539 aaPredicted RBP12.93□□□□□ -0.34
MDC1-201ENST00000376406 ME1P48163 572 aa12.93□□□□□ -0.34
MDC1-201ENST00000376406 SPC24Q8NBT2 197 aa12.93□□□□□ -0.34
MDC1-201ENST00000376406 KDM4AO75164 1064 aa12.93□□□□□ -0.34
MDC1-201ENST00000376406 TRIM21P19474 475 aaKnown RBP12.93□□□□□ -0.34
MDC1-201ENST00000376406 ST5P78524 1137 aa12.93□□□□□ -0.34
MDC1-201ENST00000376406 CDC5LQ99459 802 aaKnown RBP12.93□□□□□ -0.34
MDC1-201ENST00000376406 PPP1R42Q7Z4L9 355 aa12.92□□□□□ -0.34
MDC1-201ENST00000376406 IL1RAPL2Q9NP60 686 aa12.92□□□□□ -0.34
MDC1-201ENST00000376406 GLRX3O76003 335 aaKnown RBP12.92□□□□□ -0.34
MDC1-201ENST00000376406 NME9Q86XW9 330 aa12.92□□□□□ -0.34
MDC1-201ENST00000376406 ERCC4Q92889 916 aaPredicted RBP12.92□□□□□ -0.34
MDC1-201ENST00000376406 THUMPD2Q9BTF0 503 aaKnown RBP12.92□□□□□ -0.34
MDC1-201ENST00000376406 ODF2Q5BJF6 829 aa12.92□□□□□ -0.34
MDC1-201ENST00000376406 NUTM1Q86Y26 1132 aa12.92□□□□□ -0.34
MDC1-201ENST00000376406 MIS18AQ9NYP9 233 aa12.92□□□□□ -0.34
MDC1-201ENST00000376406 CDCA7Q9BWT1 371 aaPredicted RBP12.92□□□□□ -0.34
MDC1-201ENST00000376406 CEBPAP49715 358 aaPredicted RBP12.92□□□□□ -0.34
MDC1-201ENST00000376406 HSP90B2PQ58FF3 399 aa12.92□□□□□ -0.34
MDC1-201ENST00000376406 LRRC59Q96AG4 307 aaKnown RBP12.92□□□□□ -0.34
MDC1-201ENST00000376406 LRP2BPQ9P2M1 347 aa12.91□□□□□ -0.34
MDC1-201ENST00000376406 EXOC6BQ9Y2D4 811 aa12.91□□□□□ -0.34
MDC1-201ENST00000376406 CBFA2T2O43439 604 aa12.91□□□□□ -0.34
MDC1-201ENST00000376406 SOGA3Q5TF21 947 aa12.91□□□□□ -0.34
MDC1-201ENST00000376406 NUP62CLQ9H1M0 184 aa12.91□□□□□ -0.34
MDC1-201ENST00000376406 FKBP4Q02790 459 aaKnown RBP eCLIP12.91□□□□□ -0.34
MDC1-201ENST00000376406 SAMD1Q6SPF0 538 aaPredicted RBP12.91□□□□□ -0.34
MDC1-201ENST00000376406 ZSCAN29Q8IWY8 852 aaPredicted RBP12.91□□□□□ -0.34
MDC1-201ENST00000376406 CAGE1Q8TC20 777 aa12.91□□□□□ -0.34
MDC1-201ENST00000376406 DBF4Q9UBU7 674 aaPredicted RBP12.91□□□□□ -0.34
MDC1-201ENST00000376406 IL27Q8NEV9 243 aa12.9□□□□□ -0.34
MDC1-201ENST00000376406 WASF1Q92558 559 aa12.9□□□□□ -0.34
MDC1-201ENST00000376406 CDR1P51861 262 aa12.9□□□□□ -0.34
MDC1-201ENST00000376406 DCTN1Q14203 1278 aa12.9□□□□□ -0.34
MDC1-201ENST00000376406 PPP4R3BQ5MIZ7 849 aa12.9□□□□□ -0.34
MDC1-201ENST00000376406 ZFYVE16Q7Z3T8 1539 aa12.9□□□□□ -0.34
MDC1-201ENST00000376406 SMARCA5O60264 1052 aaPredicted RBP12.9□□□□□ -0.34
MDC1-201ENST00000376406 SERPINC1P01008 464 aa12.9□□□□□ -0.34
MDC1-201ENST00000376406 LMTK3Q96Q04 1460 aa12.9□□□□□ -0.34
MDC1-201ENST00000376406 IFIT5Q13325 482 aaKnown RBP12.9□□□□□ -0.34
MDC1-201ENST00000376406 TMEM132AQ24JP5 1023 aa12.9□□□□□ -0.34
MDC1-201ENST00000376406 ANKIB1Q9P2G1 1089 aa12.9□□□□□ -0.34
MDC1-201ENST00000376406 SLC5A1P13866 664 aa12.89□□□□□ -0.35
MDC1-201ENST00000376406 RFC4P35249 363 aa12.89□□□□□ -0.35
MDC1-201ENST00000376406 MPRIPQ6WCQ1 1025 aa12.89□□□□□ -0.35
MDC1-201ENST00000376406 ZMYM3Q14202 1370 aa12.89□□□□□ -0.35
MDC1-201ENST00000376406 METTL24Q5JXM2 366 aa12.89□□□□□ -0.35
MDC1-201ENST00000376406 EMILIN1Q9Y6C2 1016 aa12.89□□□□□ -0.35
MDC1-201ENST00000376406 TDO2P48775 406 aa12.89□□□□□ -0.35
MDC1-201ENST00000376406 ATP2B2Q01814 1243 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms