RNA–Protein interactions for RNA: ENST00000375635.6

C6orf48-202, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-202ENST00000375635 TAF1LQ8IZX4 1826 aa17.74■□□□□ 0.43
C6orf48-202ENST00000375635 SIPA1L3O60292 1781 aaPredicted RBP17.74■□□□□ 0.43
C6orf48-202ENST00000375635 DLG5Q8TDM6 1919 aa17.73■□□□□ 0.43
C6orf48-202ENST00000375635 NBPF14Q5TI25 921 aa17.73■□□□□ 0.43
C6orf48-202ENST00000375635 AKT1S1Q96B36 256 aa17.73■□□□□ 0.43
C6orf48-202ENST00000375635 SLC4A9Q96Q91 983 aa17.73■□□□□ 0.43
C6orf48-202ENST00000375635 CCNL1Q9UK58 526 aaPredicted RBP17.73■□□□□ 0.43
C6orf48-202ENST00000375635 C5P01031 1676 aa17.72■□□□□ 0.43
C6orf48-202ENST00000375635 SLC15A2Q16348 729 aa17.72■□□□□ 0.43
C6orf48-202ENST00000375635 ADAMTS8Q9UP79 889 aa17.72■□□□□ 0.43
C6orf48-202ENST00000375635 LOC102724428A0A0B4J2F2 783 aa17.71■□□□□ 0.43
C6orf48-202ENST00000375635 SIK1P57059 783 aa17.71■□□□□ 0.43
C6orf48-202ENST00000375635 PDGFDQ9GZP0 370 aaPredicted RBP17.71■□□□□ 0.43
C6orf48-202ENST00000375635 CASZ1Q86V15 1759 aa17.71■□□□□ 0.43
C6orf48-202ENST00000375635 ZNF831Q5JPB2 1677 aa17.71■□□□□ 0.42
C6orf48-202ENST00000375635 ANP32CO43423 234 aa17.7■□□□□ 0.42
C6orf48-202ENST00000375635 ITPK1Q13572 414 aa17.7■□□□□ 0.42
C6orf48-202ENST00000375635 TUBGCP6Q96RT7 1819 aa17.7■□□□□ 0.42
C6orf48-202ENST00000375635 HTATSF1O43719 755 aaKnown RBP17.68■□□□□ 0.42
C6orf48-202ENST00000375635 NFE2L2Q16236 605 aa17.68■□□□□ 0.42
C6orf48-202ENST00000375635 QSER1Q2KHR3 1735 aa17.68■□□□□ 0.42
C6orf48-202ENST00000375635 STK32BQ9NY57 414 aa17.68■□□□□ 0.42
C6orf48-202ENST00000375635 CICQ96RK0 1608 aaPredicted RBP17.68■□□□□ 0.42
C6orf48-202ENST00000375635 KCPQ6ZWJ8 1503 aa17.67■□□□□ 0.42
C6orf48-202ENST00000375635 C4BP0C0L5 1744 aa17.67■□□□□ 0.42
C6orf48-202ENST00000375635 UBR2Q8IWV8 1755 aa17.67■□□□□ 0.42
C6orf48-202ENST00000375635 SLC39A6Q13433 755 aa17.67■□□□□ 0.42
C6orf48-202ENST00000375635 DCTN1Q14203 1278 aa17.67■□□□□ 0.42
C6orf48-202ENST00000375635 MCM10Q7L590 875 aa17.67■□□□□ 0.42
C6orf48-202ENST00000375635 LINC00116Q8NCU8 138 aa17.67■□□□□ 0.42
C6orf48-202ENST00000375635 PNNQ9H307 717 aaKnown RBP17.67■□□□□ 0.42
C6orf48-202ENST00000375635 WDR43Q15061 677 aaKnown RBP eCLIP17.66■□□□□ 0.427e-40■□□□□ 10.9
C6orf48-202ENST00000375635 AMIGO3Q86WK7 504 aa17.66■□□□□ 0.42
C6orf48-202ENST00000375635 CCDC146Q8IYE0 955 aa17.66■□□□□ 0.42
C6orf48-202ENST00000375635 COL5A3P25940 1745 aaPredicted RBP17.66■□□□□ 0.42
C6orf48-202ENST00000375635 TJP1Q07157 1748 aa17.66■□□□□ 0.42
C6orf48-202ENST00000375635 ATP6V1AP38606 617 aa17.65■□□□□ 0.42
C6orf48-202ENST00000375635 PNISRQ8TF01 805 aaKnown RBP17.65■□□□□ 0.42
C6orf48-202ENST00000375635 PTCD1O75127 700 aaKnown RBP17.64■□□□□ 0.41
C6orf48-202ENST00000375635 TMPOP42166 694 aaKnown RBP17.64■□□□□ 0.41
C6orf48-202ENST00000375635 RUNDC1Q96C34 613 aa17.64■□□□□ 0.41
C6orf48-202ENST00000375635 RBM42Q9BTD8 480 aaKnown RBP17.64■□□□□ 0.41
C6orf48-202ENST00000375635 PNPLA7Q6ZV29 1317 aa17.64■□□□□ 0.41
C6orf48-202ENST00000375635 MAPK8IP3Q9UPT6 1336 aa17.64■□□□□ 0.41
C6orf48-202ENST00000375635 MYH14Q7Z406 1995 aaKnown RBP17.64■□□□□ 0.41
C6orf48-202ENST00000375635 UBR3Q6ZT12 1888 aa17.63■□□□□ 0.41
C6orf48-202ENST00000375635 NEFMP07197 916 aa17.63■□□□□ 0.41
C6orf48-202ENST00000375635 TEFQ10587 303 aa17.63■□□□□ 0.41
C6orf48-202ENST00000375635 LRP5O75197 1615 aa17.62■□□□□ 0.41
C6orf48-202ENST00000375635 KCNQ3O43525 872 aa17.62■□□□□ 0.41
C6orf48-202ENST00000375635 RTF1Q92541 710 aaKnown RBP17.62■□□□□ 0.41
C6orf48-202ENST00000375635 THUMPD2Q9BTF0 503 aaKnown RBP17.62■□□□□ 0.41
C6orf48-202ENST00000375635 RIPK4P57078 832 aa17.61■□□□□ 0.41
C6orf48-202ENST00000375635 ZNF790Q6PG37 636 aa17.61■□□□□ 0.41
C6orf48-202ENST00000375635 MRS2Q9HD23 443 aa17.61■□□□□ 0.41
C6orf48-202ENST00000375635 SMIM5Q71RC9 77 aa17.6■□□□□ 0.41
C6orf48-202ENST00000375635 ZNF496Q96IT1 587 aaPredicted RBP17.6■□□□□ 0.41
C6orf48-202ENST00000375635 TFCP2L1Q9NZI6 479 aa17.6■□□□□ 0.41
C6orf48-202ENST00000375635 TRIM35Q9UPQ4 493 aa17.6■□□□□ 0.41
C6orf48-202ENST00000375635 RRP7AQ9Y3A4 280 aaKnown RBP17.6■□□□□ 0.41
C6orf48-202ENST00000375635 CNTNAP4Q9C0A0 1308 aa17.59■□□□□ 0.41
C6orf48-202ENST00000375635 BTBD11A6QL63 1104 aa17.59■□□□□ 0.41
C6orf48-202ENST00000375635 COL23A1Q86Y22 540 aaPredicted RBP17.59■□□□□ 0.41
C6orf48-202ENST00000375635 KDM3BQ7LBC6 1761 aa17.58■□□□□ 0.41
C6orf48-202ENST00000375635 COL24A1Q17RW2 1714 aa17.58■□□□□ 0.41
C6orf48-202ENST00000375635 HMGB2P26583 209 aaKnown RBP17.58■□□□□ 0.4
C6orf48-202ENST00000375635 TAF7Q15545 349 aaPredicted RBP17.58■□□□□ 0.4
C6orf48-202ENST00000375635 RC3H1Q5TC82 1133 aaKnown RBP17.58■□□□□ 0.4
C6orf48-202ENST00000375635 DNAJC10Q8IXB1 793 aa17.58■□□□□ 0.4
C6orf48-202ENST00000375635 VSIG10Q8N0Z9 540 aa17.58■□□□□ 0.4
C6orf48-202ENST00000375635 APAF1O14727 1248 aa17.57■□□□□ 0.4
C6orf48-202ENST00000375635 ZBTB7AO95365 584 aa17.57■□□□□ 0.4
C6orf48-202ENST00000375635 SGIP1Q9BQI5 828 aa17.57■□□□□ 0.4
C6orf48-202ENST00000375635 MIS18AQ9NYP9 233 aa17.57■□□□□ 0.4
C6orf48-202ENST00000375635 HEG1Q9ULI3 1381 aa17.56■□□□□ 0.4
C6orf48-202ENST00000375635 CYP19A1P11511 503 aaPredicted RBP17.56■□□□□ 0.4
C6orf48-202ENST00000375635 PTGER2P43116 358 aa17.56■□□□□ 0.4
C6orf48-202ENST00000375635 CRKLP46109 303 aaKnown RBP17.56■□□□□ 0.4
C6orf48-202ENST00000375635 NEUROD2Q15784 382 aa17.56■□□□□ 0.4
C6orf48-202ENST00000375635 INTS5Q6P9B9 1019 aaKnown RBP17.56■□□□□ 0.4
C6orf48-202ENST00000375635 TTC5Q8N0Z6 440 aa17.56■□□□□ 0.4
C6orf48-202ENST00000375635 AK7Q96M32 723 aa17.56■□□□□ 0.4
C6orf48-202ENST00000375635 GNPATO15228 680 aa17.55■□□□□ 0.4
C6orf48-202ENST00000375635 MTFR1LQ9H019 292 aa17.55■□□□□ 0.4
C6orf48-202ENST00000375635 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.54■□□□□ 0.4
C6orf48-202ENST00000375635 SSFA2P28290 1259 aa17.54■□□□□ 0.4
C6orf48-202ENST00000375635 SLC16A10Q8TF71 515 aa17.54■□□□□ 0.4
C6orf48-202ENST00000375635 FMNL2Q96PY5 1086 aa17.54■□□□□ 0.4
C6orf48-202ENST00000375635 SPON1Q9HCB6 807 aa17.54■□□□□ 0.4
C6orf48-202ENST00000375635 RPS6KA4O75676 772 aa17.53■□□□□ 0.4
C6orf48-202ENST00000375635 LMOD3Q0VAK6 560 aa17.53■□□□□ 0.4
C6orf48-202ENST00000375635 ATF5Q9Y2D1 282 aaPredicted RBP17.53■□□□□ 0.4
C6orf48-202ENST00000375635 PRAMEF22A3QJZ6 481 aa17.52■□□□□ 0.4
C6orf48-202ENST00000375635 PHF14O94880 888 aa17.52■□□□□ 0.4
C6orf48-202ENST00000375635 FLAD1Q8NFF5 587 aa17.52■□□□□ 0.4
C6orf48-202ENST00000375635 C4AP0C0L4 1744 aa17.51■□□□□ 0.39
C6orf48-202ENST00000375635 CCDC87Q9NVE4 849 aa17.51■□□□□ 0.39
C6orf48-202ENST00000375635 EIF4A1P60842 406 aaKnown RBP17.5■□□□□ 0.39
C6orf48-202ENST00000375635 ZBTB1Q9Y2K1 713 aa17.5■□□□□ 0.39
C6orf48-202ENST00000375635 RTCBQ9Y3I0 505 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms