RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 ZSCAN23Q3MJ62 389 aa13.58□□□□□ -0.24
PTCH1-203ENST00000375274 MTMR7Q9Y216 660 aa13.58□□□□□ -0.24
PTCH1-203ENST00000375274 FAM83GA6ND36 823 aa13.57□□□□□ -0.24
PTCH1-203ENST00000375274 STX6O43752 255 aa13.57□□□□□ -0.24
PTCH1-203ENST00000375274 SDSP20132 328 aa13.57□□□□□ -0.24
PTCH1-203ENST00000375274 UBXN4Q92575 508 aa13.57□□□□□ -0.24
PTCH1-203ENST00000375274 LARP6Q9BRS8 491 aaKnown RBP13.57□□□□□ -0.24
PTCH1-203ENST00000375274 FAM177BA6PVY3 158 aa13.57□□□□□ -0.24
PTCH1-203ENST00000375274 SFPQP23246 707 aaKnown RBP eCLIP13.57□□□□□ -0.24
PTCH1-203ENST00000375274 CABP4P57796 275 aa13.57□□□□□ -0.24
PTCH1-203ENST00000375274 SMTNL1A8MU46 457 aa13.57□□□□□ -0.24
PTCH1-203ENST00000375274 CDKL5O76039 1030 aa13.57□□□□□ -0.24
PTCH1-203ENST00000375274 LEKR1Q6ZMV7 388 aa13.57□□□□□ -0.24
PTCH1-203ENST00000375274 KIF6Q6ZMV9 814 aa13.57□□□□□ -0.24
PTCH1-203ENST00000375274 CKAP2LQ8IYA6 745 aa13.57□□□□□ -0.24
PTCH1-203ENST00000375274 STK11IPQ8N1F8 1099 aa13.57□□□□□ -0.24
PTCH1-203ENST00000375274 TMX3Q96JJ7 454 aa13.57□□□□□ -0.24
PTCH1-203ENST00000375274 RBM42Q9BTD8 480 aaKnown RBP13.57□□□□□ -0.24
PTCH1-203ENST00000375274 SPG7Q9UQ90 795 aa13.57□□□□□ -0.24
PTCH1-203ENST00000375274 POLR3AO14802 1390 aaPredicted RBP13.57□□□□□ -0.24
PTCH1-203ENST00000375274 KIF2AO00139 706 aaPredicted RBP13.56□□□□□ -0.24
PTCH1-203ENST00000375274 ANKRD36BQ8N2N9 1353 aa13.56□□□□□ -0.24
PTCH1-203ENST00000375274 WASLO00401 505 aaPredicted RBP13.56□□□□□ -0.24
PTCH1-203ENST00000375274 TSHZ3Q63HK5 1081 aa13.56□□□□□ -0.24
PTCH1-203ENST00000375274 NUP160Q12769 1436 aa13.56□□□□□ -0.24
PTCH1-203ENST00000375274 ADCY5O95622 1261 aa13.56□□□□□ -0.24
PTCH1-203ENST00000375274 CFAP100Q494V2 611 aa13.56□□□□□ -0.24
PTCH1-203ENST00000375274 DNAAF4Q8WXU2 420 aa13.56□□□□□ -0.24
PTCH1-203ENST00000375274 NACAP1Q9BZK3 213 aa13.56□□□□□ -0.24
PTCH1-203ENST00000375274 ANO10Q9NW15 660 aa13.56□□□□□ -0.24
PTCH1-203ENST00000375274 RNF123Q5XPI4 1314 aa13.56□□□□□ -0.24
PTCH1-203ENST00000375274 MAGEC2Q9UBF1 373 aaPredicted RBP13.56□□□□□ -0.24
PTCH1-203ENST00000375274 LRSAM1Q6UWE0 723 aa13.55□□□□□ -0.24
PTCH1-203ENST00000375274 SMC5Q8IY18 1101 aa13.55□□□□□ -0.24
PTCH1-203ENST00000375274 U3KPZ7 1027 aaPredicted RBP13.55□□□□□ -0.24
PTCH1-203ENST00000375274 CBX1P83916 185 aa13.55□□□□□ -0.24
PTCH1-203ENST00000375274 KIF18AQ8NI77 898 aa13.55□□□□□ -0.24
PTCH1-203ENST00000375274 DDX19AQ9NUU7 478 aaKnown RBP13.55□□□□□ -0.24
PTCH1-203ENST00000375274 ZNHIT6Q9NWK9 470 aaKnown RBP13.55□□□□□ -0.24
PTCH1-203ENST00000375274 CCDC69A6NI79 296 aa13.55□□□□□ -0.24
PTCH1-203ENST00000375274 HCLS1P14317 486 aaPredicted RBP13.55□□□□□ -0.24
PTCH1-203ENST00000375274 AXDND1Q5T1B0 1012 aaPredicted RBP13.55□□□□□ -0.24
PTCH1-203ENST00000375274 ZSCAN25Q6NSZ9 544 aa13.55□□□□□ -0.24
PTCH1-203ENST00000375274 MEIS3Q99687 375 aa13.55□□□□□ -0.24
PTCH1-203ENST00000375274 CCDC8Q9H0W5 538 aaPredicted RBP13.55□□□□□ -0.24
PTCH1-203ENST00000375274 SPINK5Q9NQ38 1064 aaPredicted RBP13.55□□□□□ -0.24
PTCH1-203ENST00000375274 ECHDC1Q9NTX5 307 aa13.55□□□□□ -0.24
PTCH1-203ENST00000375274 H0YHG0 523 aa13.54□□□□□ -0.24
PTCH1-203ENST00000375274 UBE2HP62256 183 aa13.54□□□□□ -0.24
PTCH1-203ENST00000375274 RBM33Q96EV2 1170 aaKnown RBP13.54□□□□□ -0.24
PTCH1-203ENST00000375274 TRIM34Q9BYJ4 488 aa13.54□□□□□ -0.24
PTCH1-203ENST00000375274 TFIP11Q9UBB9 837 aaKnown RBP13.54□□□□□ -0.24
PTCH1-203ENST00000375274 ADGRL1O94910 1474 aa13.54□□□□□ -0.24
PTCH1-203ENST00000375274 ERLIN1O75477 346 aa13.54□□□□□ -0.24
PTCH1-203ENST00000375274 FBLN1P23142 703 aa13.54□□□□□ -0.24
PTCH1-203ENST00000375274 EPS15P42566 896 aa13.54□□□□□ -0.24
PTCH1-203ENST00000375274 ANKRD44Q8N8A2 993 aa13.54□□□□□ -0.24
PTCH1-203ENST00000375274 CLIP2Q9UDT6 1046 aa13.54□□□□□ -0.24
PTCH1-203ENST00000375274 LARP1Q6PKG0 1096 aaKnown RBP13.54□□□□□ -0.24
PTCH1-203ENST00000375274 PROSER2Q86WR7 435 aaPredicted RBP13.54□□□□□ -0.24
PTCH1-203ENST00000375274 TCOF1Q13428 1488 aaKnown RBP13.54□□□□□ -0.24
PTCH1-203ENST00000375274 C16orf45Q96MC5 204 aaPredicted RBP13.54□□□□□ -0.24
PTCH1-203ENST00000375274 PIK3C2GO75747 1445 aa13.53□□□□□ -0.24
PTCH1-203ENST00000375274 TNNT1P13805 278 aa13.53□□□□□ -0.24
PTCH1-203ENST00000375274 GJB2P29033 226 aa13.53□□□□□ -0.24
PTCH1-203ENST00000375274 IMMTQ16891 758 aaKnown RBP13.53□□□□□ -0.24
PTCH1-203ENST00000375274 UVSSAQ2YD98 709 aa13.53□□□□□ -0.24
PTCH1-203ENST00000375274 NUP133Q8WUM0 1156 aa13.53□□□□□ -0.24
PTCH1-203ENST00000375274 PATL2C9JE40 543 aaKnown RBP13.53□□□□□ -0.24
PTCH1-203ENST00000375274 DYNC1I1O14576 645 aa13.52□□□□□ -0.24
PTCH1-203ENST00000375274 PDE1AP54750 535 aa13.52□□□□□ -0.24
PTCH1-203ENST00000375274 RAB3GAP1Q15042 981 aa13.52□□□□□ -0.24
PTCH1-203ENST00000375274 PRDM10Q9NQV6 1147 aa13.52□□□□□ -0.24
PTCH1-203ENST00000375274 CTAGE5O15320 804 aa13.52□□□□□ -0.24
PTCH1-203ENST00000375274 ZNF165P49910 485 aa13.52□□□□□ -0.24
PTCH1-203ENST00000375274 ZBTB40Q9NUA8 1239 aa13.52□□□□□ -0.24
PTCH1-203ENST00000375274 EIF3JO75822 258 aaKnown RBP13.52□□□□□ -0.25
PTCH1-203ENST00000375274 PPP1R42Q7Z4L9 355 aa13.52□□□□□ -0.25
PTCH1-203ENST00000375274 DBF4Q9UBU7 674 aaPredicted RBP13.52□□□□□ -0.25
PTCH1-203ENST00000375274 SLC3A2P08195 630 aaKnown RBP13.52□□□□□ -0.25
PTCH1-203ENST00000375274 TCEAL9Q9UHQ7 104 aa13.52□□□□□ -0.25
PTCH1-203ENST00000375274 STIM1Q13586 685 aa13.51□□□□□ -0.25
PTCH1-203ENST00000375274 TMCO3Q6UWJ1 677 aa13.51□□□□□ -0.25
PTCH1-203ENST00000375274 EVI5LQ96CN4 794 aa13.51□□□□□ -0.25
PTCH1-203ENST00000375274 CARD14Q9BXL6 1004 aa13.51□□□□□ -0.25
PTCH1-203ENST00000375274 HMGB1P09429 215 aaKnown RBP13.51□□□□□ -0.25
PTCH1-203ENST00000375274 GUCY1B3Q02153 619 aa13.51□□□□□ -0.25
PTCH1-203ENST00000375274 FBXO31Q5XUX0 539 aaPredicted RBP13.51□□□□□ -0.25
PTCH1-203ENST00000375274 MRPL50Q8N5N7 158 aaKnown RBP13.51□□□□□ -0.25
PTCH1-203ENST00000375274 KCNH5Q8NCM2 988 aa13.51□□□□□ -0.25
PTCH1-203ENST00000375274 NOL7Q9UMY1 257 aaKnown RBP13.51□□□□□ -0.25
PTCH1-203ENST00000375274 KDM2BQ8NHM5 1336 aa13.5□□□□□ -0.25
PTCH1-203ENST00000375274 IDH1O75874 414 aaKnown RBP13.5□□□□□ -0.25
PTCH1-203ENST00000375274 C8orf58Q8NAV2 365 aa13.5□□□□□ -0.25
PTCH1-203ENST00000375274 C8orf76Q96K31 380 aa13.5□□□□□ -0.25
PTCH1-203ENST00000375274 PRIMPOLQ96LW4 560 aa13.5□□□□□ -0.25
PTCH1-203ENST00000375274 NUP153P49790 1475 aaKnown RBP13.5□□□□□ -0.25
PTCH1-203ENST00000375274 ANAPC15P60006 121 aa13.5□□□□□ -0.25
PTCH1-203ENST00000375274 ARHGAP29Q52LW3 1261 aa13.5□□□□□ -0.25
PTCH1-203ENST00000375274 USHBP1Q8N6Y0 703 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms