RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 CCDC43Q96MW1 224 aaKnown RBP24.84■■□□□ 1.57
TGFBR1-202ENST00000374994 PLB1Q6P1J6 1458 aa24.84■■□□□ 1.57
TGFBR1-202ENST00000374994 UGGT2Q9NYU1 1516 aa24.84■■□□□ 1.57
TGFBR1-202ENST00000374994 BTBD11A6QL63 1104 aa24.84■■□□□ 1.57
TGFBR1-202ENST00000374994 ASXL1Q8IXJ9 1541 aa24.84■■□□□ 1.57
TGFBR1-202ENST00000374994 ADGRF5Q8IZF2 1346 aa24.84■■□□□ 1.57
TGFBR1-202ENST00000374994 HS1BP3Q53T59 392 aa24.84■■□□□ 1.57
TGFBR1-202ENST00000374994 GSDMDP57764 484 aa24.83■■□□□ 1.57
TGFBR1-202ENST00000374994 RAD21O60216 631 aa24.83■■□□□ 1.57
TGFBR1-202ENST00000374994 PATL2C9JE40 543 aaKnown RBP24.83■■□□□ 1.57
TGFBR1-202ENST00000374994 RRP12Q5JTH9 1297 aaKnown RBP24.83■■□□□ 1.57
TGFBR1-202ENST00000374994 UBE2HP62256 183 aa24.83■■□□□ 1.56
TGFBR1-202ENST00000374994 CAMK4Q16566 473 aa24.83■■□□□ 1.56
TGFBR1-202ENST00000374994 IMMTQ16891 758 aaKnown RBP24.82■■□□□ 1.56
TGFBR1-202ENST00000374994 ZSCAN23Q3MJ62 389 aa24.82■■□□□ 1.56
TGFBR1-202ENST00000374994 TSPYL1Q9H0U9 437 aa24.82■■□□□ 1.56
TGFBR1-202ENST00000374994 CLIP2Q9UDT6 1046 aa24.82■■□□□ 1.56
TGFBR1-202ENST00000374994 CFAP100Q494V2 611 aa24.82■■□□□ 1.56
TGFBR1-202ENST00000374994 ESCO1Q5FWF5 840 aa24.82■■□□□ 1.56
TGFBR1-202ENST00000374994 MCM10Q7L590 875 aa24.82■■□□□ 1.56
TGFBR1-202ENST00000374994 CCDC57Q2TAC2 916 aa24.82■■□□□ 1.56
TGFBR1-202ENST00000374994 THEMISQ8N1K5 641 aaPredicted RBP24.82■■□□□ 1.56
TGFBR1-202ENST00000374994 PCDHB15Q9Y5E8 787 aa24.82■■□□□ 1.56
TGFBR1-202ENST00000374994 GOLGA6L10A6NI86 522 aa24.82■■□□□ 1.56
TGFBR1-202ENST00000374994 STX6O43752 255 aa24.81■■□□□ 1.56
TGFBR1-202ENST00000374994 USP8P40818 1118 aa24.81■■□□□ 1.56
TGFBR1-202ENST00000374994 CCAR1Q8IX12 1150 aaKnown RBP24.81■■□□□ 1.56
TGFBR1-202ENST00000374994 CEP131Q9UPN4 1083 aa24.81■■□□□ 1.56
TGFBR1-202ENST00000374994 C14orf93Q9H972 538 aaKnown RBP24.81■■□□□ 1.56
TGFBR1-202ENST00000374994 POLR3AO14802 1390 aaPredicted RBP24.81■■□□□ 1.56
TGFBR1-202ENST00000374994 FYB1O15117 783 aa24.81■■□□□ 1.56
TGFBR1-202ENST00000374994 KIAA0754O94854 1291 aa24.81■■□□□ 1.56
TGFBR1-202ENST00000374994 TAF7Q15545 349 aaPredicted RBP24.81■■□□□ 1.56
TGFBR1-202ENST00000374994 ERLIN2O94905 339 aa24.81■■□□□ 1.56
TGFBR1-202ENST00000374994 ANAPC15P60006 121 aa24.81■■□□□ 1.56
TGFBR1-202ENST00000374994 ARHGAP29Q52LW3 1261 aa24.8■■□□□ 1.56
TGFBR1-202ENST00000374994 CCDC181Q5TID7 509 aa24.8■■□□□ 1.56
TGFBR1-202ENST00000374994 EPB41L2O43491 1005 aaKnown RBP24.79■■□□□ 1.56
TGFBR1-202ENST00000374994 ADCY5O95622 1261 aa24.79■■□□□ 1.56
TGFBR1-202ENST00000374994 TNNT1P13805 278 aa24.79■■□□□ 1.56
TGFBR1-202ENST00000374994 SMC5Q8IY18 1101 aa24.79■■□□□ 1.56
TGFBR1-202ENST00000374994 LAMC3Q9Y6N6 1575 aa24.79■■□□□ 1.56
TGFBR1-202ENST00000374994 CTDP1Q9Y5B0 961 aaPredicted RBP24.79■■□□□ 1.56
TGFBR1-202ENST00000374994 DDX11Q96FC9 970 aa24.78■■□□□ 1.56
TGFBR1-202ENST00000374994 KDM4AO75164 1064 aa24.78■■□□□ 1.56
TGFBR1-202ENST00000374994 CABP4P57796 275 aa24.78■■□□□ 1.56
TGFBR1-202ENST00000374994 LARP1Q6PKG0 1096 aaKnown RBP24.78■■□□□ 1.56
TGFBR1-202ENST00000374994 FAM177A1Q8N128 213 aaPredicted RBP24.78■■□□□ 1.56
TGFBR1-202ENST00000374994 UBE2Q2Q8WVN8 375 aa24.78■■□□□ 1.56
TGFBR1-202ENST00000374994 DEF6Q9H4E7 631 aa24.77■■□□□ 1.56
TGFBR1-202ENST00000374994 PIK3C2GO75747 1445 aa24.77■■□□□ 1.56
TGFBR1-202ENST00000374994 NCBP3Q53F19 620 aaKnown RBP24.77■■□□□ 1.56
TGFBR1-202ENST00000374994 EVI5LQ96CN4 794 aa24.77■■□□□ 1.56
TGFBR1-202ENST00000374994 TCOF1Q13428 1488 aaKnown RBP24.77■■□□□ 1.56
TGFBR1-202ENST00000374994 CALRP27797 417 aaKnown RBP24.77■■□□□ 1.56
TGFBR1-202ENST00000374994 GRIN2AQ12879 1464 aa24.76■■□□□ 1.55
TGFBR1-202ENST00000374994 PRAG1Q86YV5 1406 aa24.76■■□□□ 1.55
TGFBR1-202ENST00000374994 GPATCH8Q9UKJ3 1502 aaKnown RBP24.76■■□□□ 1.55
TGFBR1-202ENST00000374994 TTC21BQ7Z4L5 1316 aa24.76■■□□□ 1.55
TGFBR1-202ENST00000374994 FKBP4Q02790 459 aaKnown RBP eCLIP24.76■■□□□ 1.55
TGFBR1-202ENST00000374994 ECHDC1Q9NTX5 307 aa24.76■■□□□ 1.55
TGFBR1-202ENST00000374994 DNAAF4Q8WXU2 420 aa24.75■■□□□ 1.55
TGFBR1-202ENST00000374994 PAXBP1Q9Y5B6 917 aa24.75■■□□□ 1.55
TGFBR1-202ENST00000374994 KCNH5Q8NCM2 988 aa24.75■■□□□ 1.55
TGFBR1-202ENST00000374994 LRRFIP2Q9Y608 721 aaKnown RBP24.75■■□□□ 1.55
TGFBR1-202ENST00000374994 INSRP06213 1382 aa24.75■■□□□ 1.55
TGFBR1-202ENST00000374994 FLIIQ13045 1269 aa24.75■■□□□ 1.55
TGFBR1-202ENST00000374994 HSP90AB2PQ58FF8 381 aa24.75■■□□□ 1.55
TGFBR1-202ENST00000374994 STX1AQ16623 288 aa24.74■■□□□ 1.55
TGFBR1-202ENST00000374994 CBX1P83916 185 aa24.74■■□□□ 1.55
TGFBR1-202ENST00000374994 CCDC148Q8NFR7 591 aa24.74■■□□□ 1.55
TGFBR1-202ENST00000374994 MBIPQ9NS73 344 aa24.74■■□□□ 1.55
TGFBR1-202ENST00000374994 CALCOCO1Q9P1Z2 691 aa24.74■■□□□ 1.55
TGFBR1-202ENST00000374994 EMILIN1Q9Y6C2 1016 aa24.74■■□□□ 1.55
TGFBR1-202ENST00000374994 ODF2Q5BJF6 829 aa24.74■■□□□ 1.55
TGFBR1-202ENST00000374994 UBAC1Q9BSL1 405 aa24.74■■□□□ 1.55
TGFBR1-202ENST00000374994 TMX3Q96JJ7 454 aa24.74■■□□□ 1.55
TGFBR1-202ENST00000374994 MCM3P25205 808 aa24.74■■□□□ 1.55
TGFBR1-202ENST00000374994 RAB3GAP1Q15042 981 aa24.73■■□□□ 1.55
TGFBR1-202ENST00000374994 HMG20BQ9P0W2 317 aa24.73■■□□□ 1.55
TGFBR1-202ENST00000374994 AKAP2Q9Y2D5 859 aa24.73■■□□□ 1.55
TGFBR1-202ENST00000374994 GOLGA6L9A6NEM1 432 aa24.73■■□□□ 1.55
TGFBR1-202ENST00000374994 ZKSCAN5Q9Y2L8 839 aa24.73■■□□□ 1.55
TGFBR1-202ENST00000374994 MYL6BP14649 208 aa24.72■■□□□ 1.55
TGFBR1-202ENST00000374994 GJB2P29033 226 aa24.72■■□□□ 1.55
TGFBR1-202ENST00000374994 PUS7Q96PZ0 661 aaKnown RBP24.72■■□□□ 1.55
TGFBR1-202ENST00000374994 TOP1P11387 765 aaKnown RBP24.72■■□□□ 1.55
TGFBR1-202ENST00000374994 NME9Q86XW9 330 aa24.72■■□□□ 1.55
TGFBR1-202ENST00000374994 CCDC102AQ96A19 550 aa24.72■■□□□ 1.55
TGFBR1-202ENST00000374994 C8orf76Q96K31 380 aa24.72■■□□□ 1.55
TGFBR1-202ENST00000374994 ARHGEF12Q9NZN5 1544 aa24.72■■□□□ 1.55
TGFBR1-202ENST00000374994 AMOTQ4VCS5 1084 aa24.71■■□□□ 1.55
TGFBR1-202ENST00000374994 MIS18AQ9NYP9 233 aa24.71■■□□□ 1.55
TGFBR1-202ENST00000374994 NUP133Q8WUM0 1156 aa24.71■■□□□ 1.55
TGFBR1-202ENST00000374994 NOS1P29475 1434 aa24.71■■□□□ 1.55
TGFBR1-202ENST00000374994 POTEB2H3BUK9 544 aa24.71■■□□□ 1.55
TGFBR1-202ENST00000374994 KIF5CO60282 957 aa24.71■■□□□ 1.55
TGFBR1-202ENST00000374994 ZSCAN22P10073 491 aaPredicted RBP24.71■■□□□ 1.55
TGFBR1-202ENST00000374994 ANKRD44Q8N8A2 993 aa24.7■■□□□ 1.55
TGFBR1-202ENST00000374994 F6X3S4 739 aa24.7■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms