RNA–Protein interactions for RNA: ENST00000374940.3

HLA-DQA2-210, Transcript of major histocompatibility complex, class II, DQ alpha 2, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA2, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2-210ENST00000374940 MRC1P22897 1456 aa16.2■□□□□ 0.18
HLA-DQA2-210ENST00000374940 TEFQ10587 303 aa16.2■□□□□ 0.18
HLA-DQA2-210ENST00000374940 CEMIPQ8WUJ3 1361 aa16.2■□□□□ 0.18
HLA-DQA2-210ENST00000374940 RREB1Q92766 1687 aa16.2■□□□□ 0.18
HLA-DQA2-210ENST00000374940 ASAP1Q9ULH1 1129 aa16.2■□□□□ 0.18
HLA-DQA2-210ENST00000374940 NBPF14Q5TI25 921 aa16.19■□□□□ 0.18
HLA-DQA2-210ENST00000374940 ATG3Q9NT62 314 aa16.19■□□□□ 0.18
HLA-DQA2-210ENST00000374940 TMPOP42166 694 aaKnown RBP16.19■□□□□ 0.18
HLA-DQA2-210ENST00000374940 RIPK4P57078 832 aa16.19■□□□□ 0.18
HLA-DQA2-210ENST00000374940 MCM10Q7L590 875 aa16.19■□□□□ 0.18
HLA-DQA2-210ENST00000374940 CCNL1Q9UK58 526 aaPredicted RBP16.19■□□□□ 0.18
HLA-DQA2-210ENST00000374940 HMGB2P26583 209 aaKnown RBP16.18■□□□□ 0.18
HLA-DQA2-210ENST00000374940 LRRC4BQ9NT99 713 aa16.18■□□□□ 0.18
HLA-DQA2-210ENST00000374940 LY75O60449 1722 aa16.17■□□□□ 0.18
HLA-DQA2-210ENST00000374940 CCER2I3L3R5 266 aa16.17■□□□□ 0.18
HLA-DQA2-210ENST00000374940 LMOD3Q0VAK6 560 aa16.17■□□□□ 0.18
HLA-DQA2-210ENST00000374940 DCTN1Q14203 1278 aa16.17■□□□□ 0.18
HLA-DQA2-210ENST00000374940 NUP188Q5SRE5 1749 aa16.17■□□□□ 0.18
HLA-DQA2-210ENST00000374940 LOC102724428A0A0B4J2F2 783 aa16.16■□□□□ 0.18
HLA-DQA2-210ENST00000374940 SIK1P57059 783 aa16.16■□□□□ 0.18
HLA-DQA2-210ENST00000374940 NEUROD2Q15784 382 aa16.15■□□□□ 0.18
HLA-DQA2-210ENST00000374940 RRP7AQ9Y3A4 280 aaKnown RBP16.15■□□□□ 0.18
HLA-DQA2-210ENST00000374940 VIRMAQ69YN4 1812 aaKnown RBP16.14■□□□□ 0.18
HLA-DQA2-210ENST00000374940 APAF1O14727 1248 aa16.14■□□□□ 0.18
HLA-DQA2-210ENST00000374940 KCNA4P22459 653 aa16.14■□□□□ 0.18
HLA-DQA2-210ENST00000374940 KCNQ4P56696 695 aa16.14■□□□□ 0.18
HLA-DQA2-210ENST00000374940 FAM9BQ8IZU0 186 aa16.14■□□□□ 0.18
HLA-DQA2-210ENST00000374940 RBM42Q9BTD8 480 aaKnown RBP16.14■□□□□ 0.18
HLA-DQA2-210ENST00000374940 BTBD11A6QL63 1104 aa16.14■□□□□ 0.17
HLA-DQA2-210ENST00000374940 ATP6V1AP38606 617 aa16.14■□□□□ 0.17
HLA-DQA2-210ENST00000374940 TTC5Q8N0Z6 440 aa16.14■□□□□ 0.17
HLA-DQA2-210ENST00000374940 STK32BQ9NY57 414 aa16.14■□□□□ 0.17
HLA-DQA2-210ENST00000374940 PTCD1O75127 700 aaKnown RBP16.13■□□□□ 0.17
HLA-DQA2-210ENST00000374940 SLC39A6Q13433 755 aa16.13■□□□□ 0.17
HLA-DQA2-210ENST00000374940 TAF7Q15545 349 aaPredicted RBP16.13■□□□□ 0.17
HLA-DQA2-210ENST00000374940 ANO8Q9HCE9 1232 aaPredicted RBP16.13■□□□□ 0.17
HLA-DQA2-210ENST00000374940 DLG5Q8TDM6 1919 aa16.13■□□□□ 0.17
HLA-DQA2-210ENST00000374940 SLC15A2Q16348 729 aa16.12■□□□□ 0.17
HLA-DQA2-210ENST00000374940 ZNF790Q6PG37 636 aa16.12■□□□□ 0.17
HLA-DQA2-210ENST00000374940 MIER1Q8N108 512 aa16.12■□□□□ 0.17
HLA-DQA2-210ENST00000374940 PAPPAQ13219 1627 aa16.12■□□□□ 0.17
HLA-DQA2-210ENST00000374940 SIPA1L3O60292 1781 aaPredicted RBP16.11■□□□□ 0.17
HLA-DQA2-210ENST00000374940 R3HDM1Q15032 1099 aaKnown RBP16.11■□□□□ 0.17
HLA-DQA2-210ENST00000374940 SLC4A9Q96Q91 983 aa16.11■□□□□ 0.17
HLA-DQA2-210ENST00000374940 THUMPD2Q9BTF0 503 aaKnown RBP16.11■□□□□ 0.17
HLA-DQA2-210ENST00000374940 TRIM35Q9UPQ4 493 aa16.11■□□□□ 0.17
HLA-DQA2-210ENST00000374940 ITPK1Q13572 414 aa16.1■□□□□ 0.17
HLA-DQA2-210ENST00000374940 AKT1S1Q96B36 256 aa16.1■□□□□ 0.17
HLA-DQA2-210ENST00000374940 ZNF831Q5JPB2 1677 aa16.09■□□□□ 0.17
HLA-DQA2-210ENST00000374940 PSDA5PKW4 1024 aaPredicted RBP16.09■□□□□ 0.17
HLA-DQA2-210ENST00000374940 VSIG10Q8N0Z9 540 aa16.09■□□□□ 0.17
HLA-DQA2-210ENST00000374940 KCPQ6ZWJ8 1503 aa16.09■□□□□ 0.17
HLA-DQA2-210ENST00000374940 ZNF827Q17R98 1081 aa16.09■□□□□ 0.17
HLA-DQA2-210ENST00000374940 C5P01031 1676 aa16.08■□□□□ 0.17
HLA-DQA2-210ENST00000374940 NCBP3Q53F19 620 aaKnown RBP16.08■□□□□ 0.16
HLA-DQA2-210ENST00000374940 LINC00116Q8NCU8 138 aa16.08■□□□□ 0.16
HLA-DQA2-210ENST00000374940 ZNF496Q96IT1 587 aaPredicted RBP16.08■□□□□ 0.16
HLA-DQA2-210ENST00000374940 FMNL2Q96PY5 1086 aa16.08■□□□□ 0.16
HLA-DQA2-210ENST00000374940 BABAM1Q9NWV8 329 aa16.07■□□□□ 0.16
HLA-DQA2-210ENST00000374940 MIS18AQ9NYP9 233 aa16.07■□□□□ 0.16
HLA-DQA2-210ENST00000374940 TFCP2L1Q9NZI6 479 aa16.07■□□□□ 0.16
HLA-DQA2-210ENST00000374940 KCNQ3O43525 872 aa16.06■□□□□ 0.16
HLA-DQA2-210ENST00000374940 CALD1Q05682 793 aaKnown RBP16.06■□□□□ 0.16
HLA-DQA2-210ENST00000374940 CCDC27Q2M243 656 aa16.06■□□□□ 0.16
HLA-DQA2-210ENST00000374940 AK7Q96M32 723 aa16.06■□□□□ 0.16
HLA-DQA2-210ENST00000374940 UBR2Q8IWV8 1755 aa16.06■□□□□ 0.16
HLA-DQA2-210ENST00000374940 HEG1Q9ULI3 1381 aa16.06■□□□□ 0.16
HLA-DQA2-210ENST00000374940 C4BP0C0L5 1744 aa16.05■□□□□ 0.16
HLA-DQA2-210ENST00000374940 RC3H1Q5TC82 1133 aaKnown RBP16.05■□□□□ 0.16
HLA-DQA2-210ENST00000374940 DNAJC10Q8IXB1 793 aa16.05■□□□□ 0.16
HLA-DQA2-210ENST00000374940 CICQ96RK0 1608 aaPredicted RBP16.05■□□□□ 0.16
HLA-DQA2-210ENST00000374940 TAF1LQ8IZX4 1826 aa16.05■□□□□ 0.16
HLA-DQA2-210ENST00000374940 TEX13AQ9BXU3 409 aaPredicted RBP16.04■□□□□ 0.16
HLA-DQA2-210ENST00000374940 TSPYL4Q9UJ04 414 aa16.04■□□□□ 0.16
HLA-DQA2-210ENST00000374940 CNTNAP4Q9C0A0 1308 aa16.04■□□□□ 0.16
HLA-DQA2-210ENST00000374940 NGEFQ8N5V2 710 aa16.04■□□□□ 0.16
HLA-DQA2-210ENST00000374940 TJP1Q07157 1748 aa16.03■□□□□ 0.16
HLA-DQA2-210ENST00000374940 SENP3-EIF4A1A0A087X0R7 540 aa16.03■□□□□ 0.16
HLA-DQA2-210ENST00000374940 CHL1O00533 1208 aa16.03■□□□□ 0.16
HLA-DQA2-210ENST00000374940 GNPATO15228 680 aa16.03■□□□□ 0.16
HLA-DQA2-210ENST00000374940 STARD3NLO95772 234 aa16.03■□□□□ 0.16
HLA-DQA2-210ENST00000374940 CYP19A1P11511 503 aaPredicted RBP16.03■□□□□ 0.16
HLA-DQA2-210ENST00000374940 WWC1Q8IX03 1113 aa16.03■□□□□ 0.16
HLA-DQA2-210ENST00000374940 FLAD1Q8NFF5 587 aa16.03■□□□□ 0.16
HLA-DQA2-210ENST00000374940 CFAP44Q96MT7 982 aa16.03■□□□□ 0.16
HLA-DQA2-210ENST00000374940 LAS1LQ9Y4W2 734 aaKnown RBP16.03■□□□□ 0.16
HLA-DQA2-210ENST00000374940 PNPLA7Q6ZV29 1317 aa16.03■□□□□ 0.16
HLA-DQA2-210ENST00000374940 SNRPA1P09661 255 aaKnown RBP16.02■□□□□ 0.15
HLA-DQA2-210ENST00000374940 CRKLP46109 303 aaKnown RBP16.02■□□□□ 0.15
HLA-DQA2-210ENST00000374940 EIF4A1P60842 406 aaKnown RBP16.02■□□□□ 0.15
HLA-DQA2-210ENST00000374940 COL5A3P25940 1745 aaPredicted RBP16.02■□□□□ 0.15
HLA-DQA2-210ENST00000374940 KDM3BQ7LBC6 1761 aa16.02■□□□□ 0.15
HLA-DQA2-210ENST00000374940 SSFA2P28290 1259 aa16.01■□□□□ 0.15
HLA-DQA2-210ENST00000374940 IFT57Q9NWB7 429 aa16.01■□□□□ 0.15
HLA-DQA2-210ENST00000374940 RTCBQ9Y3I0 505 aaKnown RBP16.01■□□□□ 0.15
HLA-DQA2-210ENST00000374940 RPS6KA4O75676 772 aa16■□□□□ 0.15
HLA-DQA2-210ENST00000374940 GNAI1P63096 354 aa16■□□□□ 0.15
HLA-DQA2-210ENST00000374940 PDGFDQ9GZP0 370 aaPredicted RBP16■□□□□ 0.15
HLA-DQA2-210ENST00000374940 CCDC87Q9NVE4 849 aa16■□□□□ 0.15
HLA-DQA2-210ENST00000374940 SALL2Q9Y467 1007 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms