RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 MCM10Q7L590 875 aa14.95□□□□□ -0.02
HSPG2-202ENST00000374676 SMARCC1Q92922 1105 aaPredicted RBP14.95□□□□□ -0.02
HSPG2-202ENST00000374676 TRIM35Q9UPQ4 493 aa14.95□□□□□ -0.02
HSPG2-202ENST00000374676 RRP7AQ9Y3A4 280 aaKnown RBP14.95□□□□□ -0.02
HSPG2-202ENST00000374676 RGPD3A6NKT7 1758 aaPredicted RBP14.95□□□□□ -0.02
HSPG2-202ENST00000374676 SIPA1L3O60292 1781 aaPredicted RBP14.95□□□□□ -0.02
HSPG2-202ENST00000374676 RGPD4Q7Z3J3 1758 aa14.95□□□□□ -0.02
HSPG2-202ENST00000374676 DCTN1Q14203 1278 aa14.94□□□□□ -0.02
HSPG2-202ENST00000374676 DEFB132Q7Z7B7 95 aa14.94□□□□□ -0.02
HSPG2-202ENST00000374676 NGEFQ8N5V2 710 aa14.94□□□□□ -0.02
HSPG2-202ENST00000374676 CAMKK2Q96RR4 588 aa14.94□□□□□ -0.02
HSPG2-202ENST00000374676 EN1Q05925 392 aaPredicted RBP14.93□□□□□ -0.02
HSPG2-202ENST00000374676 CCDC27Q2M243 656 aa14.93□□□□□ -0.02
HSPG2-202ENST00000374676 TAF7Q15545 349 aaPredicted RBP14.92□□□□□ -0.02
HSPG2-202ENST00000374676 ATG3Q9NT62 314 aa14.92□□□□□ -0.02
HSPG2-202ENST00000374676 ASAP1Q9ULH1 1129 aa14.92□□□□□ -0.02
HSPG2-202ENST00000374676 LY75O60449 1722 aa14.92□□□□□ -0.02
HSPG2-202ENST00000374676 PROM2Q8N271 834 aa14.91□□□□□ -0.02
HSPG2-202ENST00000374676 PALLDQ8WX93 1383 aa14.9□□□□□ -0.02
HSPG2-202ENST00000374676 EZH2Q15910 746 aaKnown RBP14.9□□□□□ -0.02
HSPG2-202ENST00000374676 TXNRD1Q16881 649 aa14.9□□□□□ -0.02
HSPG2-202ENST00000374676 THUMPD2Q9BTF0 503 aaKnown RBP14.9□□□□□ -0.02
HSPG2-202ENST00000374676 BABAM1Q9NWV8 329 aa14.9□□□□□ -0.02
HSPG2-202ENST00000374676 BTBD11A6QL63 1104 aa14.89□□□□□ -0.03
HSPG2-202ENST00000374676 HMGB2P26583 209 aaKnown RBP14.89□□□□□ -0.03
HSPG2-202ENST00000374676 SLC27A3Q5K4L6 730 aa14.89□□□□□ -0.03
HSPG2-202ENST00000374676 PAPPAQ13219 1627 aa14.88□□□□□ -0.03
HSPG2-202ENST00000374676 CALD1Q05682 793 aaKnown RBP14.88□□□□□ -0.03
HSPG2-202ENST00000374676 SLC39A6Q13433 755 aa14.88□□□□□ -0.03
HSPG2-202ENST00000374676 ZNF790Q6PG37 636 aa14.88□□□□□ -0.03
HSPG2-202ENST00000374676 WWC1Q8IX03 1113 aa14.88□□□□□ -0.03
HSPG2-202ENST00000374676 ZNF831Q5JPB2 1677 aa14.87□□□□□ -0.03
HSPG2-202ENST00000374676 RREB1Q92766 1687 aa14.87□□□□□ -0.03
HSPG2-202ENST00000374676 LOC102724428A0A0B4J2F2 783 aa14.87□□□□□ -0.03
HSPG2-202ENST00000374676 SIK1P57059 783 aa14.87□□□□□ -0.03
HSPG2-202ENST00000374676 TTC5Q8N0Z6 440 aa14.87□□□□□ -0.03
HSPG2-202ENST00000374676 UBR2Q8IWV8 1755 aa14.86□□□□□ -0.03
HSPG2-202ENST00000374676 CHL1O00533 1208 aa14.86□□□□□ -0.03
HSPG2-202ENST00000374676 CCNL1Q9UK58 526 aaPredicted RBP14.86□□□□□ -0.03
HSPG2-202ENST00000374676 KDM3BQ7LBC6 1761 aa14.85□□□□□ -0.03
HSPG2-202ENST00000374676 SENP3-EIF4A1A0A087X0R7 540 aa14.85□□□□□ -0.03
HSPG2-202ENST00000374676 ZNF853P0CG23 659 aa14.85□□□□□ -0.03
HSPG2-202ENST00000374676 WDR63Q8IWG1 891 aa14.85□□□□□ -0.03
HSPG2-202ENST00000374676 VSIG10Q8N0Z9 540 aa14.85□□□□□ -0.03
HSPG2-202ENST00000374676 CFAP44Q96MT7 982 aa14.85□□□□□ -0.03
HSPG2-202ENST00000374676 SLC4A9Q96Q91 983 aa14.85□□□□□ -0.03
HSPG2-202ENST00000374676 RBM42Q9BTD8 480 aaKnown RBP14.85□□□□□ -0.03
HSPG2-202ENST00000374676 LRRC4BQ9NT99 713 aa14.85□□□□□ -0.03
HSPG2-202ENST00000374676 MIS18AQ9NYP9 233 aa14.85□□□□□ -0.03
HSPG2-202ENST00000374676 IL16Q14005 1332 aa14.85□□□□□ -0.03
HSPG2-202ENST00000374676 TAF1LQ8IZX4 1826 aa14.85□□□□□ -0.03
HSPG2-202ENST00000374676 KCPQ6ZWJ8 1503 aa14.84□□□□□ -0.03
HSPG2-202ENST00000374676 KCNQ3O43525 872 aa14.84□□□□□ -0.03
HSPG2-202ENST00000374676 PTCD1O75127 700 aaKnown RBP14.84□□□□□ -0.03
HSPG2-202ENST00000374676 ATP6V1AP38606 617 aa14.84□□□□□ -0.03
HSPG2-202ENST00000374676 GNAI1P63096 354 aa14.84□□□□□ -0.03
HSPG2-202ENST00000374676 ZNF496Q96IT1 587 aaPredicted RBP14.84□□□□□ -0.03
HSPG2-202ENST00000374676 FMNL2Q96PY5 1086 aa14.84□□□□□ -0.03
HSPG2-202ENST00000374676 IFT57Q9NWB7 429 aa14.84□□□□□ -0.03
HSPG2-202ENST00000374676 SALL2Q9Y467 1007 aaPredicted RBP14.84□□□□□ -0.03
HSPG2-202ENST00000374676 NUP188Q5SRE5 1749 aa14.83□□□□□ -0.03
HSPG2-202ENST00000374676 TSPYL4Q9UJ04 414 aa14.83□□□□□ -0.04
HSPG2-202ENST00000374676 CICQ96RK0 1608 aaPredicted RBP14.83□□□□□ -0.04
HSPG2-202ENST00000374676 ZNF521Q96K83 1311 aa14.83□□□□□ -0.04
HSPG2-202ENST00000374676 EIF4A1P60842 406 aaKnown RBP14.82□□□□□ -0.04
HSPG2-202ENST00000374676 ITPK1Q13572 414 aa14.82□□□□□ -0.04
HSPG2-202ENST00000374676 TEX13AQ9BXU3 409 aaPredicted RBP14.82□□□□□ -0.04
HSPG2-202ENST00000374676 HEG1Q9ULI3 1381 aa14.82□□□□□ -0.04
HSPG2-202ENST00000374676 KCNQ4P56696 695 aa14.81□□□□□ -0.04
HSPG2-202ENST00000374676 NBPF14Q5TI25 921 aa14.81□□□□□ -0.04
HSPG2-202ENST00000374676 LAS1LQ9Y4W2 734 aaKnown RBP14.81□□□□□ -0.04
HSPG2-202ENST00000374676 C5P01031 1676 aa14.81□□□□□ -0.04
HSPG2-202ENST00000374676 TJP1Q07157 1748 aa14.8□□□□□ -0.04
HSPG2-202ENST00000374676 SNRPA1P09661 255 aaKnown RBP14.79□□□□□ -0.04
HSPG2-202ENST00000374676 COL5A3P25940 1745 aaPredicted RBP14.79□□□□□ -0.04
HSPG2-202ENST00000374676 RC3H1Q5TC82 1133 aaKnown RBP14.79□□□□□ -0.04
HSPG2-202ENST00000374676 MYH14Q7Z406 1995 aaKnown RBP14.79□□□□□ -0.04
HSPG2-202ENST00000374676 DNAJC10Q8IXB1 793 aa14.79□□□□□ -0.04
HSPG2-202ENST00000374676 LINC00116Q8NCU8 138 aa14.79□□□□□ -0.04
HSPG2-202ENST00000374676 AKT1S1Q96B36 256 aa14.79□□□□□ -0.04
HSPG2-202ENST00000374676 MBIPQ9NS73 344 aa14.79□□□□□ -0.04
HSPG2-202ENST00000374676 GIGYF1O75420 1035 aaPredicted RBP14.78□□□□□ -0.04
HSPG2-202ENST00000374676 SLC15A2Q16348 729 aa14.78□□□□□ -0.04
HSPG2-202ENST00000374676 STK32BQ9NY57 414 aa14.78□□□□□ -0.04
HSPG2-202ENST00000374676 C4BP0C0L5 1744 aa14.78□□□□□ -0.04
HSPG2-202ENST00000374676 CNTNAP4Q9C0A0 1308 aa14.77□□□□□ -0.04
HSPG2-202ENST00000374676 STARD3NLO95772 234 aa14.77□□□□□ -0.05
HSPG2-202ENST00000374676 CYP19A1P11511 503 aaPredicted RBP14.77□□□□□ -0.05
HSPG2-202ENST00000374676 HNRNPUQ00839 825 aaKnown RBP eCLIP14.77□□□□□ -0.05
HSPG2-202ENST00000374676 GOLGA2Q08379 1002 aa14.77□□□□□ -0.05
HSPG2-202ENST00000374676 ANO8Q9HCE9 1232 aaPredicted RBP14.77□□□□□ -0.05
HSPG2-202ENST00000374676 ZNF827Q17R98 1081 aa14.76□□□□□ -0.05
HSPG2-202ENST00000374676 USP16Q9Y5T5 823 aa14.76□□□□□ -0.05
HSPG2-202ENST00000374676 QSER1Q2KHR3 1735 aa14.75□□□□□ -0.05
HSPG2-202ENST00000374676 HOXB7P09629 217 aa14.75□□□□□ -0.05
HSPG2-202ENST00000374676 CRKLP46109 303 aaKnown RBP14.75□□□□□ -0.05
HSPG2-202ENST00000374676 MYH16Q9H6N6 1097 aa14.75□□□□□ -0.05
HSPG2-202ENST00000374676 SPINK5Q9NQ38 1064 aaPredicted RBP14.75□□□□□ -0.05
HSPG2-202ENST00000374676 UBR3Q6ZT12 1888 aa14.74□□□□□ -0.05
HSPG2-202ENST00000374676 PRAMEF22A3QJZ6 481 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms