RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 BRCA1P38398 1863 aaKnown RBP20.68■□□□□ 0.9
CDKN1A-202ENST00000373711 ARFGEF1Q9Y6D6 1849 aa20.67■□□□□ 0.9
CDKN1A-202ENST00000373711 ATP6V1AP38606 617 aa20.67■□□□□ 0.9
CDKN1A-202ENST00000373711 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.67■□□□□ 0.9
CDKN1A-202ENST00000373711 BCS1LQ9Y276 419 aa20.67■□□□□ 0.9
CDKN1A-202ENST00000373711 NLGN1Q8N2Q7 840 aa20.66■□□□□ 0.9
CDKN1A-202ENST00000373711 PLEKHG2Q9H7P9 1386 aa20.66■□□□□ 0.9
CDKN1A-202ENST00000373711 C10orf71Q711Q0 1435 aa20.65■□□□□ 0.9
CDKN1A-202ENST00000373711 C16orf71Q8IYS4 520 aaPredicted RBP20.65■□□□□ 0.9
CDKN1A-202ENST00000373711 CCDC87Q9NVE4 849 aa20.65■□□□□ 0.9
CDKN1A-202ENST00000373711 RTCBQ9Y3I0 505 aaKnown RBP20.65■□□□□ 0.9
CDKN1A-202ENST00000373711 C4AP0C0L4 1744 aa20.64■□□□□ 0.9
CDKN1A-202ENST00000373711 SMIM5Q71RC9 77 aa20.64■□□□□ 0.89
CDKN1A-202ENST00000373711 IFNL2Q8IZJ0 200 aa20.64■□□□□ 0.89
CDKN1A-202ENST00000373711 ADRA2BP18089 450 aa20.63■□□□□ 0.89
CDKN1A-202ENST00000373711 TRAPPC3LQ5T215 181 aa20.63■□□□□ 0.89
CDKN1A-202ENST00000373711 ARHGAP27Q6ZUM4 889 aa20.63■□□□□ 0.89
CDKN1A-202ENST00000373711 COL5A3P25940 1745 aaPredicted RBP20.62■□□□□ 0.89
CDKN1A-202ENST00000373711 ITPK1Q13572 414 aa20.62■□□□□ 0.89
CDKN1A-202ENST00000373711 RBM46Q8TBY0 533 aaKnown RBP20.62■□□□□ 0.89
CDKN1A-202ENST00000373711 ASAP1Q9ULH1 1129 aa20.62■□□□□ 0.89
CDKN1A-202ENST00000373711 EMILIN1Q9Y6C2 1016 aa20.62■□□□□ 0.89
CDKN1A-202ENST00000373711 PPM1GO15355 546 aaPredicted RBP20.61■□□□□ 0.89
CDKN1A-202ENST00000373711 FCHSD2O94868 740 aa20.61■□□□□ 0.89
CDKN1A-202ENST00000373711 DNAJC5GQ8N7S2 189 aa20.61■□□□□ 0.89
CDKN1A-202ENST00000373711 PARP3Q9Y6F1 533 aa20.6■□□□□ 0.89
CDKN1A-202ENST00000373711 TNRC6CQ9HCJ0 1690 aaKnown RBP20.6■□□□□ 0.89
CDKN1A-202ENST00000373711 A0A0G2JLW4 131 aa20.59■□□□□ 0.89
CDKN1A-202ENST00000373711 PHKG2P15735 406 aa20.59■□□□□ 0.89
CDKN1A-202ENST00000373711 NMRK2Q9NPI5 230 aa20.59■□□□□ 0.89
CDKN1A-202ENST00000373711 KDRP35968 1356 aa20.59■□□□□ 0.89
CDKN1A-202ENST00000373711 WASHC2AQ641Q2 1341 aa20.58■□□□□ 0.89
CDKN1A-202ENST00000373711 KDM2BQ8NHM5 1336 aa20.58■□□□□ 0.89
CDKN1A-202ENST00000373711 FSTL1Q12841 308 aa20.58■□□□□ 0.89
CDKN1A-202ENST00000373711 ATG3Q9NT62 314 aa20.58■□□□□ 0.89
CDKN1A-202ENST00000373711 HSP90AB1P08238 724 aaKnown RBP20.57■□□□□ 0.88
CDKN1A-202ENST00000373711 RFC4P35249 363 aa20.57■□□□□ 0.88
CDKN1A-202ENST00000373711 RC3H1Q5TC82 1133 aaKnown RBP20.57■□□□□ 0.88
CDKN1A-202ENST00000373711 CNTNAP4Q9C0A0 1308 aa20.56■□□□□ 0.88
CDKN1A-202ENST00000373711 DPEP1P16444 411 aa20.56■□□□□ 0.88
CDKN1A-202ENST00000373711 KLRG1Q96E93 195 aa20.56■□□□□ 0.88
CDKN1A-202ENST00000373711 EYA1Q99502 592 aa20.56■□□□□ 0.88
CDKN1A-202ENST00000373711 C9orf131Q5VYM1 1079 aa20.55■□□□□ 0.88
CDKN1A-202ENST00000373711 ERVV-2B6SEH9 535 aa20.54■□□□□ 0.88
CDKN1A-202ENST00000373711 ARHGEF1Q92888 912 aaKnown RBP20.54■□□□□ 0.88
CDKN1A-202ENST00000373711 RBM42Q9BTD8 480 aaKnown RBP20.54■□□□□ 0.88
CDKN1A-202ENST00000373711 PIM2Q9P1W9 311 aa20.54■□□□□ 0.88
CDKN1A-202ENST00000373711 RPS6KA4O75676 772 aa20.53■□□□□ 0.88
CDKN1A-202ENST00000373711 GYS1P13807 737 aa20.53■□□□□ 0.88
CDKN1A-202ENST00000373711 MYH14Q7Z406 1995 aaKnown RBP20.52■□□□□ 0.88
CDKN1A-202ENST00000373711 SBF1O95248 1867 aa20.52■□□□□ 0.88
CDKN1A-202ENST00000373711 JMYQ8N9B5 988 aa20.52■□□□□ 0.88
CDKN1A-202ENST00000373711 DALRD3Q5D0E6 543 aaKnown RBP20.51■□□□□ 0.87
CDKN1A-202ENST00000373711 DCAF5Q96JK2 942 aa20.51■□□□□ 0.87
CDKN1A-202ENST00000373711 KCPQ6ZWJ8 1503 aa20.51■□□□□ 0.87
CDKN1A-202ENST00000373711 CARD14Q9BXL6 1004 aa20.49■□□□□ 0.87
CDKN1A-202ENST00000373711 RNF181Q9P0P0 153 aa20.49■□□□□ 0.87
CDKN1A-202ENST00000373711 ZC3H4Q9UPT8 1303 aaKnown RBP20.49■□□□□ 0.87
CDKN1A-202ENST00000373711 SMC1BQ8NDV3 1235 aa20.48■□□□□ 0.87
CDKN1A-202ENST00000373711 CABP4P57796 275 aa20.47■□□□□ 0.87
CDKN1A-202ENST00000373711 PLEKHO1Q53GL0 409 aaPredicted RBP20.47■□□□□ 0.87
CDKN1A-202ENST00000373711 SLC4A9Q96Q91 983 aa20.47■□□□□ 0.87
CDKN1A-202ENST00000373711 POLKQ9UBT6 870 aa20.47■□□□□ 0.87
CDKN1A-202ENST00000373711 KCNA3P22001 575 aa20.46■□□□□ 0.87
CDKN1A-202ENST00000373711 EIF4A2Q14240 407 aaKnown RBP20.46■□□□□ 0.87
CDKN1A-202ENST00000373711 AMOTQ4VCS5 1084 aa20.45■□□□□ 0.86
CDKN1A-202ENST00000373711 COL13A1Q5TAT6 717 aaPredicted RBP20.45■□□□□ 0.86
CDKN1A-202ENST00000373711 TNS4Q8IZW8 715 aa20.45■□□□□ 0.86
CDKN1A-202ENST00000373711 RRAGCQ9HB90 399 aa20.44■□□□□ 0.86
CDKN1A-202ENST00000373711 USP42Q9H9J4 1324 aaKnown RBP20.44■□□□□ 0.86
CDKN1A-202ENST00000373711 HTRA3P83110 453 aa20.43■□□□□ 0.86
CDKN1A-202ENST00000373711 ZNF530Q6P9A1 599 aaPredicted RBP20.43■□□□□ 0.86
CDKN1A-202ENST00000373711 TJP1Q07157 1748 aa20.43■□□□□ 0.86
CDKN1A-202ENST00000373711 CRKLP46109 303 aaKnown RBP20.42■□□□□ 0.86
CDKN1A-202ENST00000373711 C1orf141Q5JVX7 400 aa20.42■□□□□ 0.86
CDKN1A-202ENST00000373711 KDM6AO15550 1401 aaPredicted RBP20.42■□□□□ 0.86
CDKN1A-202ENST00000373711 DLEC1Q9Y238 1755 aa20.41■□□□□ 0.86
CDKN1A-202ENST00000373711 PTCD1O75127 700 aaKnown RBP20.4■□□□□ 0.86
CDKN1A-202ENST00000373711 CAPN15O75808 1086 aa20.4■□□□□ 0.86
CDKN1A-202ENST00000373711 MTHFSP49914 203 aa20.4■□□□□ 0.86
CDKN1A-202ENST00000373711 PRELPP51888 382 aa20.4■□□□□ 0.86
CDKN1A-202ENST00000373711 FKBP8Q14318 412 aa20.4■□□□□ 0.86
CDKN1A-202ENST00000373711 CCDC88AQ3V6T2 1871 aa20.4■□□□□ 0.86
CDKN1A-202ENST00000373711 TIAM2Q8IVF5 1701 aa20.4■□□□□ 0.86
CDKN1A-202ENST00000373711 SCN11AQ9UI33 1791 aa20.4■□□□□ 0.86
CDKN1A-202ENST00000373711 AFDNP55196 1824 aaKnown RBP20.39■□□□□ 0.86
CDKN1A-202ENST00000373711 ZPR1O75312 459 aa20.39■□□□□ 0.85
CDKN1A-202ENST00000373711 DDR1Q08345 913 aa20.39■□□□□ 0.85
CDKN1A-202ENST00000373711 SRP68Q9UHB9 627 aaKnown RBP20.39■□□□□ 0.85
CDKN1A-202ENST00000373711 CHRNA5P30532 468 aa20.38■□□□□ 0.85
CDKN1A-202ENST00000373711 PCNTO95613 3336 aa20.38■□□□□ 0.85
CDKN1A-202ENST00000373711 POLRMTO00411 1230 aaKnown RBP20.37■□□□□ 0.85
CDKN1A-202ENST00000373711 VEGFAP15692 232 aaPredicted RBP20.37■□□□□ 0.85
CDKN1A-202ENST00000373711 LMNB1P20700 586 aa20.37■□□□□ 0.85
CDKN1A-202ENST00000373711 TNNT2P45379 298 aaPredicted RBP20.37■□□□□ 0.85
CDKN1A-202ENST00000373711 ADAMTS7Q9UKP4 1686 aa20.37■□□□□ 0.85
CDKN1A-202ENST00000373711 NRXN2Q9P2S2 1712 aa20.36■□□□□ 0.85
CDKN1A-202ENST00000373711 GLTPD2A6NH11 291 aa20.35■□□□□ 0.85
CDKN1A-202ENST00000373711 VIRMAQ69YN4 1812 aaKnown RBP20.34■□□□□ 0.85
CDKN1A-202ENST00000373711 TM4SF1P30408 202 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms