RNA–Protein interactions for RNA: ENST00000373667.4

COL16A1-201, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 924 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-201ENST00000373667 CAMKK2Q96RR4 588 aa25.02■■□□□ 1.6
COL16A1-201ENST00000373667 DLG5Q8TDM6 1919 aa25.02■■□□□ 1.6
COL16A1-201ENST00000373667 VIRMAQ69YN4 1812 aaKnown RBP25.01■■□□□ 1.59
COL16A1-201ENST00000373667 ASAP1Q9ULH1 1129 aa25.01■■□□□ 1.59
COL16A1-201ENST00000373667 SMARCC1Q92922 1105 aaPredicted RBP25■■□□□ 1.59
COL16A1-201ENST00000373667 LMOD3Q0VAK6 560 aa24.99■■□□□ 1.59
COL16A1-201ENST00000373667 ATG3Q9NT62 314 aa24.99■■□□□ 1.59
COL16A1-201ENST00000373667 THUMPD2Q9BTF0 503 aaKnown RBP24.98■■□□□ 1.59
COL16A1-201ENST00000373667 TXNRD1Q16881 649 aa24.97■■□□□ 1.59
COL16A1-201ENST00000373667 CEMIPQ8WUJ3 1361 aa24.96■■□□□ 1.59
COL16A1-201ENST00000373667 PROM2Q8N271 834 aa24.96■■□□□ 1.59
COL16A1-201ENST00000373667 PALLDQ8WX93 1383 aa24.95■■□□□ 1.59
COL16A1-201ENST00000373667 ADAMTS7Q9UKP4 1686 aa24.95■■□□□ 1.58
COL16A1-201ENST00000373667 SLC39A6Q13433 755 aa24.95■■□□□ 1.58
COL16A1-201ENST00000373667 RBM42Q9BTD8 480 aaKnown RBP24.95■■□□□ 1.58
COL16A1-201ENST00000373667 SALL2Q9Y467 1007 aaPredicted RBP24.95■■□□□ 1.58
COL16A1-201ENST00000373667 TRIM35Q9UPQ4 493 aa24.94■■□□□ 1.58
COL16A1-201ENST00000373667 BTBD11A6QL63 1104 aa24.93■■□□□ 1.58
COL16A1-201ENST00000373667 PTCD1O75127 700 aaKnown RBP24.93■■□□□ 1.58
COL16A1-201ENST00000373667 KCNQ4P56696 695 aa24.93■■□□□ 1.58
COL16A1-201ENST00000373667 TAF7Q15545 349 aaPredicted RBP24.93■■□□□ 1.58
COL16A1-201ENST00000373667 CCNL1Q9UK58 526 aaPredicted RBP24.93■■□□□ 1.58
COL16A1-201ENST00000373667 MRC1P22897 1456 aa24.91■■□□□ 1.58
COL16A1-201ENST00000373667 TTC5Q8N0Z6 440 aa24.91■■□□□ 1.58
COL16A1-201ENST00000373667 SLC27A3Q5K4L6 730 aa24.9■■□□□ 1.58
COL16A1-201ENST00000373667 MIS18AQ9NYP9 233 aa24.9■■□□□ 1.58
COL16A1-201ENST00000373667 LOC102724428A0A0B4J2F2 783 aa24.89■■□□□ 1.58
COL16A1-201ENST00000373667 SIK1P57059 783 aa24.89■■□□□ 1.58
COL16A1-201ENST00000373667 LRRC4BQ9NT99 713 aa24.89■■□□□ 1.58
COL16A1-201ENST00000373667 LAS1LQ9Y4W2 734 aaKnown RBP24.89■■□□□ 1.58
COL16A1-201ENST00000373667 RGPD3A6NKT7 1758 aaPredicted RBP24.88■■□□□ 1.57
COL16A1-201ENST00000373667 RGPD4Q7Z3J3 1758 aa24.88■■□□□ 1.57
COL16A1-201ENST00000373667 ATP6V1AP38606 617 aa24.88■■□□□ 1.57
COL16A1-201ENST00000373667 ZNF790Q6PG37 636 aa24.87■■□□□ 1.57
COL16A1-201ENST00000373667 SIPA1L3O60292 1781 aaPredicted RBP24.86■■□□□ 1.57
COL16A1-201ENST00000373667 KCNQ3O43525 872 aa24.86■■□□□ 1.57
COL16A1-201ENST00000373667 NBPF14Q5TI25 921 aa24.86■■□□□ 1.57
COL16A1-201ENST00000373667 LY75O60449 1722 aa24.86■■□□□ 1.57
COL16A1-201ENST00000373667 RREB1Q92766 1687 aa24.84■■□□□ 1.57
COL16A1-201ENST00000373667 CALD1Q05682 793 aaKnown RBP24.83■■□□□ 1.57
COL16A1-201ENST00000373667 SLC4A9Q96Q91 983 aa24.83■■□□□ 1.57
COL16A1-201ENST00000373667 TSPYL4Q9UJ04 414 aa24.83■■□□□ 1.57
COL16A1-201ENST00000373667 CCDC27Q2M243 656 aa24.82■■□□□ 1.56
COL16A1-201ENST00000373667 WWC1Q8IX03 1113 aa24.82■■□□□ 1.56
COL16A1-201ENST00000373667 ZNF496Q96IT1 587 aaPredicted RBP24.82■■□□□ 1.56
COL16A1-201ENST00000373667 STK32BQ9NY57 414 aa24.82■■□□□ 1.56
COL16A1-201ENST00000373667 NUP188Q5SRE5 1749 aa24.81■■□□□ 1.56
COL16A1-201ENST00000373667 ITPK1Q13572 414 aa24.81■■□□□ 1.56
COL16A1-201ENST00000373667 FMNL2Q96PY5 1086 aa24.81■■□□□ 1.56
COL16A1-201ENST00000373667 HMGB2P26583 209 aaKnown RBP24.8■■□□□ 1.56
COL16A1-201ENST00000373667 NCBP3Q53F19 620 aaKnown RBP24.8■■□□□ 1.56
COL16A1-201ENST00000373667 NGEFQ8N5V2 710 aa24.8■■□□□ 1.56
COL16A1-201ENST00000373667 PAPPAQ13219 1627 aa24.79■■□□□ 1.56
COL16A1-201ENST00000373667 DNAJC10Q8IXB1 793 aa24.78■■□□□ 1.56
COL16A1-201ENST00000373667 LINC00116Q8NCU8 138 aa24.78■■□□□ 1.56
COL16A1-201ENST00000373667 ANO8Q9HCE9 1232 aaPredicted RBP24.78■■□□□ 1.56
COL16A1-201ENST00000373667 BABAM1Q9NWV8 329 aa24.78■■□□□ 1.56
COL16A1-201ENST00000373667 KCPQ6ZWJ8 1503 aa24.77■■□□□ 1.56
COL16A1-201ENST00000373667 CHL1O00533 1208 aa24.77■■□□□ 1.56
COL16A1-201ENST00000373667 GNAI1P63096 354 aa24.77■■□□□ 1.56
COL16A1-201ENST00000373667 R3HDM1Q15032 1099 aaKnown RBP24.77■■□□□ 1.56
COL16A1-201ENST00000373667 VSIG10Q8N0Z9 540 aa24.77■■□□□ 1.56
COL16A1-201ENST00000373667 CFAP44Q96MT7 982 aa24.77■■□□□ 1.56
COL16A1-201ENST00000373667 PSDA5PKW4 1024 aaPredicted RBP24.76■■□□□ 1.55
COL16A1-201ENST00000373667 SLC15A2Q16348 729 aa24.76■■□□□ 1.55
COL16A1-201ENST00000373667 HEG1Q9ULI3 1381 aa24.76■■□□□ 1.55
COL16A1-201ENST00000373667 EIF4A1P60842 406 aaKnown RBP24.75■■□□□ 1.55
COL16A1-201ENST00000373667 ZNF827Q17R98 1081 aa24.75■■□□□ 1.55
COL16A1-201ENST00000373667 AK7Q96M32 723 aa24.75■■□□□ 1.55
COL16A1-201ENST00000373667 IFT57Q9NWB7 429 aa24.75■■□□□ 1.55
COL16A1-201ENST00000373667 TFCP2L1Q9NZI6 479 aa24.75■■□□□ 1.55
COL16A1-201ENST00000373667 WDR63Q8IWG1 891 aa24.74■■□□□ 1.55
COL16A1-201ENST00000373667 AKT1S1Q96B36 256 aa24.74■■□□□ 1.55
COL16A1-201ENST00000373667 TEX13AQ9BXU3 409 aaPredicted RBP24.74■■□□□ 1.55
COL16A1-201ENST00000373667 C5P01031 1676 aa24.74■■□□□ 1.55
COL16A1-201ENST00000373667 UBR2Q8IWV8 1755 aa24.74■■□□□ 1.55
COL16A1-201ENST00000373667 TAF1LQ8IZX4 1826 aa24.74■■□□□ 1.55
COL16A1-201ENST00000373667 SNRPA1P09661 255 aaKnown RBP24.73■■□□□ 1.55
COL16A1-201ENST00000373667 MBIPQ9NS73 344 aa24.73■■□□□ 1.55
COL16A1-201ENST00000373667 KDM3BQ7LBC6 1761 aa24.72■■□□□ 1.55
COL16A1-201ENST00000373667 STARD3NLO95772 234 aa24.72■■□□□ 1.55
COL16A1-201ENST00000373667 ZNF853P0CG23 659 aa24.72■■□□□ 1.55
COL16A1-201ENST00000373667 PRAMEF22A3QJZ6 481 aa24.71■■□□□ 1.55
COL16A1-201ENST00000373667 CYP19A1P11511 503 aaPredicted RBP24.71■■□□□ 1.55
COL16A1-201ENST00000373667 ZNF831Q5JPB2 1677 aa24.71■■□□□ 1.55
COL16A1-201ENST00000373667 IL16Q14005 1332 aa24.7■■□□□ 1.54
COL16A1-201ENST00000373667 CRKLP46109 303 aaKnown RBP24.7■■□□□ 1.54
COL16A1-201ENST00000373667 HNRNPUQ00839 825 aaKnown RBP eCLIP24.7■■□□□ 1.54
COL16A1-201ENST00000373667 RC3H1Q5TC82 1133 aaKnown RBP24.7■■□□□ 1.54
COL16A1-201ENST00000373667 USP16Q9Y5T5 823 aa24.7■■□□□ 1.54
COL16A1-201ENST00000373667 C4BP0C0L5 1744 aa24.69■■□□□ 1.54
COL16A1-201ENST00000373667 GNPATO15228 680 aa24.69■■□□□ 1.54
COL16A1-201ENST00000373667 MSH5O43196 834 aa24.69■■□□□ 1.54
COL16A1-201ENST00000373667 TJP1Q07157 1748 aa24.69■■□□□ 1.54
COL16A1-201ENST00000373667 GIGYF1O75420 1035 aaPredicted RBP24.68■■□□□ 1.54
COL16A1-201ENST00000373667 SMIM5Q71RC9 77 aa24.68■■□□□ 1.54
COL16A1-201ENST00000373667 TSR2Q969E8 191 aaKnown RBP24.68■■□□□ 1.54
COL16A1-201ENST00000373667 CCDC87Q9NVE4 849 aa24.68■■□□□ 1.54
COL16A1-201ENST00000373667 CNTNAP4Q9C0A0 1308 aa24.67■■□□□ 1.54
COL16A1-201ENST00000373667 PHF14O94880 888 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms