RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 MAP4K4O95819 1239 aaPredicted RBP12.41□□□□□ -0.42
NUP188-201ENST00000372577 XPCQ01831 940 aaPredicted RBP12.41□□□□□ -0.42
NUP188-201ENST00000372577 RNF214Q8ND24 703 aa12.41□□□□□ -0.42
NUP188-201ENST00000372577 MAP7D2Q96T17 732 aa12.41□□□□□ -0.42
NUP188-201ENST00000372577 FAM177BA6PVY3 158 aa12.4□□□□□ -0.42
NUP188-201ENST00000372577 TNMDQ9H2S6 317 aa12.4□□□□□ -0.42
NUP188-201ENST00000372577 HMGN5P82970 282 aaKnown RBP12.4□□□□□ -0.42
NUP188-201ENST00000372577 NUTM1Q86Y26 1132 aa12.4□□□□□ -0.42
NUP188-201ENST00000372577 GRPEL1Q9HAV7 217 aa12.4□□□□□ -0.42
NUP188-201ENST00000372577 FKBP4Q02790 459 aaKnown RBP eCLIP12.4□□□□□ -0.42
NUP188-201ENST00000372577 ARID3AQ99856 593 aa12.4□□□□□ -0.42
NUP188-201ENST00000372577 ABCC1P33527 1531 aa12.4□□□□□ -0.42
NUP188-201ENST00000372577 RRP12Q5JTH9 1297 aaKnown RBP12.4□□□□□ -0.42
NUP188-201ENST00000372577 NOL7Q9UMY1 257 aaKnown RBP12.4□□□□□ -0.42
NUP188-201ENST00000372577 SOS1Q07889 1333 aaPredicted RBP12.4□□□□□ -0.42
NUP188-201ENST00000372577 IFNL2Q8IZJ0 200 aa12.4□□□□□ -0.43
NUP188-201ENST00000372577 MNS1Q8NEH6 495 aa12.4□□□□□ -0.43
NUP188-201ENST00000372577 KRT28Q7Z3Y7 464 aa12.39□□□□□ -0.43
NUP188-201ENST00000372577 ACBD3Q9H3P7 528 aa12.39□□□□□ -0.43
NUP188-201ENST00000372577 SMARCE1Q969G3 411 aa12.39□□□□□ -0.43
NUP188-201ENST00000372577 FAM13BQ9NYF5 915 aa12.39□□□□□ -0.43
NUP188-201ENST00000372577 LRRFIP2Q9Y608 721 aaKnown RBP12.39□□□□□ -0.43
NUP188-201ENST00000372577 TRPM2O94759 1503 aa12.39□□□□□ -0.43
NUP188-201ENST00000372577 CADPS2Q86UW7 1296 aa12.39□□□□□ -0.43
NUP188-201ENST00000372577 SPATA32Q96LK8 384 aa12.39□□□□□ -0.43
NUP188-201ENST00000372577 MYD88Q99836 296 aa12.39□□□□□ -0.43
NUP188-201ENST00000372577 CASTP20810 708 aaKnown RBP12.38□□□□□ -0.43
NUP188-201ENST00000372577 NPATQ14207 1427 aa12.38□□□□□ -0.43
NUP188-201ENST00000372577 TEX35Q5T0J7 233 aa12.38□□□□□ -0.43
NUP188-201ENST00000372577 EVI5LQ96CN4 794 aa12.38□□□□□ -0.43
NUP188-201ENST00000372577 FOXO3O43524 673 aa12.38□□□□□ -0.43
NUP188-201ENST00000372577 ME1P48163 572 aa12.38□□□□□ -0.43
NUP188-201ENST00000372577 CEBPAP49715 358 aaPredicted RBP12.37□□□□□ -0.43
NUP188-201ENST00000372577 NUCB1Q02818 461 aa12.37□□□□□ -0.43
NUP188-201ENST00000372577 STK3Q13188 491 aa12.37□□□□□ -0.43
NUP188-201ENST00000372577 METTL24Q5JXM2 366 aa12.37□□□□□ -0.43
NUP188-201ENST00000372577 MPRIPQ6WCQ1 1025 aa12.37□□□□□ -0.43
NUP188-201ENST00000372577 UBAC1Q9BSL1 405 aa12.37□□□□□ -0.43
NUP188-201ENST00000372577 USHBP1Q8N6Y0 703 aa12.37□□□□□ -0.43
NUP188-201ENST00000372577 CDK5RAP3Q96JB5 506 aa12.37□□□□□ -0.43
NUP188-201ENST00000372577 FLT4P35916 1363 aa12.37□□□□□ -0.43
NUP188-201ENST00000372577 CBFA2T2O43439 604 aa12.37□□□□□ -0.43
NUP188-201ENST00000372577 TDO2P48775 406 aa12.37□□□□□ -0.43
NUP188-201ENST00000372577 ECHDC1Q9NTX5 307 aa12.37□□□□□ -0.43
NUP188-201ENST00000372577 SMARCA5O60264 1052 aaPredicted RBP12.36□□□□□ -0.43
NUP188-201ENST00000372577 IFIT1P09914 478 aaKnown RBP12.36□□□□□ -0.43
NUP188-201ENST00000372577 MAGEC2Q9UBF1 373 aaPredicted RBP12.36□□□□□ -0.43
NUP188-201ENST00000372577 TARBP1Q13395 1621 aaKnown RBP12.36□□□□□ -0.43
NUP188-201ENST00000372577 CEP170Q5SW79 1584 aa12.36□□□□□ -0.43
NUP188-201ENST00000372577 F6X3S4 739 aa12.36□□□□□ -0.43
NUP188-201ENST00000372577 TTC22Q5TAA0 569 aa12.36□□□□□ -0.43
NUP188-201ENST00000372577 AIDAQ96BJ3 306 aa12.36□□□□□ -0.43
NUP188-201ENST00000372577 NUP62CLQ9H1M0 184 aa12.36□□□□□ -0.43
NUP188-201ENST00000372577 YTHDC2Q9H6S0 1430 aaKnown RBP12.36□□□□□ -0.43
NUP188-201ENST00000372577 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.36□□□□□ -0.43
NUP188-201ENST00000372577 SMC2O95347 1197 aa12.36□□□□□ -0.43
NUP188-201ENST00000372577 PER1O15534 1290 aaPredicted RBP12.36□□□□□ -0.43
NUP188-201ENST00000372577 TBC1D32Q96NH3 1257 aa12.36□□□□□ -0.43
NUP188-201ENST00000372577 EPS15P42566 896 aa12.35□□□□□ -0.43
NUP188-201ENST00000372577 SCAND2PQ9GZW5 306 aaPredicted RBP12.35□□□□□ -0.43
NUP188-201ENST00000372577 STIM1Q13586 685 aa12.35□□□□□ -0.43
NUP188-201ENST00000372577 CEP131Q9UPN4 1083 aa12.35□□□□□ -0.43
NUP188-201ENST00000372577 IFIT5Q13325 482 aaKnown RBP12.35□□□□□ -0.43
NUP188-201ENST00000372577 DMRT2Q9Y5R5 561 aa12.35□□□□□ -0.43
NUP188-201ENST00000372577 ANKRD24Q8TF21 1146 aa12.35□□□□□ -0.43
NUP188-201ENST00000372577 ZNF287Q9HBT7 754 aa12.35□□□□□ -0.43
NUP188-201ENST00000372577 LIMCH1Q9UPQ0 1083 aa12.35□□□□□ -0.43
NUP188-201ENST00000372577 CFAP74Q9C0B2 1584 aa12.35□□□□□ -0.43
NUP188-201ENST00000372577 CEP57L1Q8IYX8 460 aa12.35□□□□□ -0.43
NUP188-201ENST00000372577 MRPL50Q8N5N7 158 aaKnown RBP12.35□□□□□ -0.43
NUP188-201ENST00000372577 PDILTQ8N807 584 aa12.35□□□□□ -0.43
NUP188-201ENST00000372577 LRP2BPQ9P2M1 347 aa12.35□□□□□ -0.43
NUP188-201ENST00000372577 POLKQ9UBT6 870 aa12.35□□□□□ -0.43
NUP188-201ENST00000372577 ALDH1L1O75891 902 aa12.34□□□□□ -0.43
NUP188-201ENST00000372577 TBC1D2Q9BYX2 928 aa12.34□□□□□ -0.43
NUP188-201ENST00000372577 IGHDP01880 384 aa12.34□□□□□ -0.43
NUP188-201ENST00000372577 SNRPA1P09661 255 aaKnown RBP12.34□□□□□ -0.43
NUP188-201ENST00000372577 PRPF40BQ6NWY9 871 aaKnown RBP12.34□□□□□ -0.43
NUP188-201ENST00000372577 TBC1D9Q6ZT07 1266 aa12.34□□□□□ -0.43
NUP188-201ENST00000372577 SOGA3Q5TF21 947 aa12.34□□□□□ -0.43
NUP188-201ENST00000372577 CCDC196A0A1B0GTZ2 297 aa12.34□□□□□ -0.43
NUP188-201ENST00000372577 TNNT3P45378 269 aaPredicted RBP12.34□□□□□ -0.43
NUP188-201ENST00000372577 IKQ13123 557 aaPredicted RBP12.34□□□□□ -0.43
NUP188-201ENST00000372577 ANKRD44Q8N8A2 993 aa12.34□□□□□ -0.43
NUP188-201ENST00000372577 RAI14Q9P0K7 980 aa12.34□□□□□ -0.43
NUP188-201ENST00000372577 AKAP4Q5JQC9 854 aa12.33□□□□□ -0.43
NUP188-201ENST00000372577 HMG20BQ9P0W2 317 aa12.33□□□□□ -0.43
NUP188-201ENST00000372577 MAP3K2Q9Y2U5 619 aa12.33□□□□□ -0.43
NUP188-201ENST00000372577 A0A1W2PP64 1363 aa12.33□□□□□ -0.44
NUP188-201ENST00000372577 ATP10AO60312 1499 aa12.33□□□□□ -0.44
NUP188-201ENST00000372577 SMTNL1A8MU46 457 aa12.33□□□□□ -0.44
NUP188-201ENST00000372577 IDH1O75874 414 aaKnown RBP12.33□□□□□ -0.44
NUP188-201ENST00000372577 ATP2B1P20020 1258 aa12.33□□□□□ -0.44
NUP188-201ENST00000372577 CEBPZQ03701 1054 aaKnown RBP12.33□□□□□ -0.44
NUP188-201ENST00000372577 TXLNBQ8N3L3 684 aa12.33□□□□□ -0.44
NUP188-201ENST00000372577 NEO1Q92859 1461 aa12.33□□□□□ -0.44
NUP188-201ENST00000372577 NUTM2BA6NNL0 878 aaPredicted RBP12.33□□□□□ -0.44
NUP188-201ENST00000372577 NUTM2EB1AL46 878 aaPredicted RBP12.33□□□□□ -0.44
NUP188-201ENST00000372577 CAVIN4Q5BKX8 364 aa12.33□□□□□ -0.44
NUP188-201ENST00000372577 NUTM2AQ8IVF1 878 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms