RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 ZGPATQ8N5A5 531 aaKnown RBP20.5■□□□□ 0.87
PCIF1-201ENST00000372409 C14orf37Q86TY3 774 aa20.5■□□□□ 0.87
PCIF1-201ENST00000372409 LRRCC1Q9C099 1032 aa20.5■□□□□ 0.87
PCIF1-201ENST00000372409 PNMA6EA0A0J9YXQ4 647 aa20.49■□□□□ 0.87
PCIF1-201ENST00000372409 GNAI3P08754 354 aa20.49■□□□□ 0.87
PCIF1-201ENST00000372409 OSBPL3Q9H4L5 887 aa20.49■□□□□ 0.87
PCIF1-201ENST00000372409 CLEC17AQ6ZS10 378 aa20.48■□□□□ 0.87
PCIF1-201ENST00000372409 RILPL2Q969X0 211 aa20.48■□□□□ 0.87
PCIF1-201ENST00000372409 TRIM6-TRIM34B2RNG4 842 aa20.48■□□□□ 0.87
PCIF1-201ENST00000372409 TRIM44Q96DX7 344 aaPredicted RBP20.48■□□□□ 0.87
PCIF1-201ENST00000372409 TBX22Q9Y458 520 aa20.48■□□□□ 0.87
PCIF1-201ENST00000372409 HOXC9P31274 260 aa20.47■□□□□ 0.87
PCIF1-201ENST00000372409 KLHL40Q2TBA0 621 aa20.47■□□□□ 0.87
PCIF1-201ENST00000372409 DIP2AQ14689 1571 aa20.47■□□□□ 0.87
PCIF1-201ENST00000372409 MX1P20591 662 aa20.47■□□□□ 0.87
PCIF1-201ENST00000372409 CWC22Q9HCG8 908 aaKnown RBP20.47■□□□□ 0.87
PCIF1-201ENST00000372409 LRRFIP2Q9Y608 721 aaKnown RBP20.47■□□□□ 0.87
PCIF1-201ENST00000372409 NEK4P51957 841 aa20.46■□□□□ 0.87
PCIF1-201ENST00000372409 ABTB2Q8N961 1025 aa20.46■□□□□ 0.87
PCIF1-201ENST00000372409 HTATSF1O43719 755 aaKnown RBP20.46■□□□□ 0.87
PCIF1-201ENST00000372409 USHBP1Q8N6Y0 703 aa20.46■□□□□ 0.87
PCIF1-201ENST00000372409 IL17REQ8NFR9 667 aa20.46■□□□□ 0.87
PCIF1-201ENST00000372409 PIK3C2AO00443 1686 aa20.45■□□□□ 0.86
PCIF1-201ENST00000372409 ATP8B2P98198 1209 aa20.45■□□□□ 0.86
PCIF1-201ENST00000372409 CYP2E1P05181 493 aaPredicted RBP20.44■□□□□ 0.86
PCIF1-201ENST00000372409 TAF7Q15545 349 aaPredicted RBP20.44■□□□□ 0.86
PCIF1-201ENST00000372409 FOXD4L5Q5VV16 416 aaPredicted RBP20.44■□□□□ 0.86
PCIF1-201ENST00000372409 CAVIN1Q6NZI2 390 aaKnown RBP20.44■□□□□ 0.86
PCIF1-201ENST00000372409 FOXD4L4Q8WXT5 416 aaPredicted RBP20.44■□□□□ 0.86
PCIF1-201ENST00000372409 MAP3K5Q99683 1374 aa20.43■□□□□ 0.86
PCIF1-201ENST00000372409 ESYT1Q9BSJ8 1104 aa20.43■□□□□ 0.86
PCIF1-201ENST00000372409 ANO2Q9NQ90 1003 aa20.43■□□□□ 0.86
PCIF1-201ENST00000372409 CLCN1P35523 988 aa20.43■□□□□ 0.86
PCIF1-201ENST00000372409 NOL8Q76FK4 1167 aaKnown RBP20.43■□□□□ 0.86
PCIF1-201ENST00000372409 HDGFL1Q5TGJ6 251 aa20.42■□□□□ 0.86
PCIF1-201ENST00000372409 UBTFL1P0CB47 393 aaPredicted RBP20.42■□□□□ 0.86
PCIF1-201ENST00000372409 NASPP49321 788 aaPredicted RBP20.42■□□□□ 0.86
PCIF1-201ENST00000372409 IL1RAPL2Q9NP60 686 aa20.42■□□□□ 0.86
PCIF1-201ENST00000372409 ESPNB1AK53 854 aa20.41■□□□□ 0.86
PCIF1-201ENST00000372409 PRPF40AO75400 957 aaKnown RBP20.41■□□□□ 0.86
PCIF1-201ENST00000372409 PLEKHG5O94827 1062 aa20.41■□□□□ 0.86
PCIF1-201ENST00000372409 MCCP23508 829 aa20.41■□□□□ 0.86
PCIF1-201ENST00000372409 LMBRD1Q9NUN5 540 aa20.41■□□□□ 0.86
PCIF1-201ENST00000372409 SALL3Q9BXA9 1300 aa20.41■□□□□ 0.86
PCIF1-201ENST00000372409 KCNA6P17658 529 aa20.41■□□□□ 0.86
PCIF1-201ENST00000372409 NAP1L5Q96NT1 182 aaPredicted RBP20.41■□□□□ 0.86
PCIF1-201ENST00000372409 PHAXQ9H814 394 aaKnown RBP20.41■□□□□ 0.86
PCIF1-201ENST00000372409 IBTKQ9P2D0 1353 aaPredicted RBP20.41■□□□□ 0.86
PCIF1-201ENST00000372409 ZBTB7CA1YPR0 619 aa20.4■□□□□ 0.86
PCIF1-201ENST00000372409 EIF2S2P20042 333 aaKnown RBP20.4■□□□□ 0.86
PCIF1-201ENST00000372409 FAM208AQ9UK61 1670 aaKnown RBP20.4■□□□□ 0.86
PCIF1-201ENST00000372409 THEMISQ8N1K5 641 aaPredicted RBP20.4■□□□□ 0.86
PCIF1-201ENST00000372409 CHAMP1Q96JM3 812 aa20.4■□□□□ 0.86
PCIF1-201ENST00000372409 USP44Q9H0E7 712 aa20.4■□□□□ 0.86
PCIF1-201ENST00000372409 CHMLP26374 656 aa20.4■□□□□ 0.86
PCIF1-201ENST00000372409 ANP32BQ92688 251 aaKnown RBP20.4■□□□□ 0.86
PCIF1-201ENST00000372409 RBM33Q96EV2 1170 aaKnown RBP20.4■□□□□ 0.86
PCIF1-201ENST00000372409 TMX3Q96JJ7 454 aa20.4■□□□□ 0.86
PCIF1-201ENST00000372409 PALD1Q9ULE6 856 aa20.4■□□□□ 0.86
PCIF1-201ENST00000372409 ZDHHC9Q9Y397 364 aa20.39■□□□□ 0.85
PCIF1-201ENST00000372409 ERBB4Q15303 1308 aa20.39■□□□□ 0.85
PCIF1-201ENST00000372409 XRN1Q8IZH2 1706 aaKnown RBP20.38■□□□□ 0.85
PCIF1-201ENST00000372409 UNC5CLQ8IV45 518 aa20.38■□□□□ 0.85
PCIF1-201ENST00000372409 SLIT1O75093 1534 aa20.38■□□□□ 0.85
PCIF1-201ENST00000372409 ZSCAN23Q3MJ62 389 aa20.38■□□□□ 0.85
PCIF1-201ENST00000372409 NUTM1Q86Y26 1132 aa20.38■□□□□ 0.85
PCIF1-201ENST00000372409 LRRC37A3O60309 1634 aa20.37■□□□□ 0.85
PCIF1-201ENST00000372409 ARHGAP23Q9P227 1491 aa20.37■□□□□ 0.85
PCIF1-201ENST00000372409 SRCIN1Q9C0H9 1055 aa20.37■□□□□ 0.85
PCIF1-201ENST00000372409 SURF6O75683 361 aaKnown RBP20.36■□□□□ 0.85
PCIF1-201ENST00000372409 MAP4K4O95819 1239 aaPredicted RBP20.36■□□□□ 0.85
PCIF1-201ENST00000372409 RBM27Q9P2N5 1060 aaKnown RBP20.35■□□□□ 0.85
PCIF1-201ENST00000372409 CCDC173Q0VFZ6 552 aa20.35■□□□□ 0.85
PCIF1-201ENST00000372409 PPP1R42Q7Z4L9 355 aa20.35■□□□□ 0.85
PCIF1-201ENST00000372409 UPF3BQ9BZI7 483 aaKnown RBP20.35■□□□□ 0.85
PCIF1-201ENST00000372409 STAP2Q9UGK3 403 aa20.35■□□□□ 0.85
PCIF1-201ENST00000372409 NWD1Q149M9 1564 aa20.35■□□□□ 0.85
PCIF1-201ENST00000372409 SOS1Q07889 1333 aaPredicted RBP20.34■□□□□ 0.85
PCIF1-201ENST00000372409 SETD1BQ9UPS6 1966 aaKnown RBP20.34■□□□□ 0.85
PCIF1-201ENST00000372409 MCM2P49736 904 aa20.34■□□□□ 0.85
PCIF1-201ENST00000372409 ZNF445P59923 1031 aa20.34■□□□□ 0.85
PCIF1-201ENST00000372409 GPT2Q8TD30 523 aa20.33■□□□□ 0.85
PCIF1-201ENST00000372409 BABAM1Q9NWV8 329 aa20.33■□□□□ 0.85
PCIF1-201ENST00000372409 ANKARQ7Z5J8 1434 aa20.33■□□□□ 0.85
PCIF1-201ENST00000372409 LGR6Q9HBX8 967 aa20.33■□□□□ 0.85
PCIF1-201ENST00000372409 CACNA1FO60840 1977 aa20.33■□□□□ 0.84
PCIF1-201ENST00000372409 SRGAP3O43295 1099 aa20.33■□□□□ 0.84
PCIF1-201ENST00000372409 SSH3Q8TE77 659 aa20.33■□□□□ 0.84
PCIF1-201ENST00000372409 CHPF2Q9P2E5 772 aa20.32■□□□□ 0.84
PCIF1-201ENST00000372409 ANXA1P04083 346 aa20.31■□□□□ 0.84
PCIF1-201ENST00000372409 ANAPC15P60006 121 aa20.31■□□□□ 0.84
PCIF1-201ENST00000372409 IL25Q9H293 177 aa20.31■□□□□ 0.84
PCIF1-201ENST00000372409 PHF8Q9UPP1 1060 aa20.31■□□□□ 0.84
PCIF1-201ENST00000372409 TUBGCP6Q96RT7 1819 aa20.31■□□□□ 0.84
PCIF1-201ENST00000372409 PXDNLA1KZ92 1463 aa20.31■□□□□ 0.84
PCIF1-201ENST00000372409 NBPF7P0C2Y1 421 aaPredicted RBP20.31■□□□□ 0.84
PCIF1-201ENST00000372409 NBPF6Q5VWK0 638 aa20.31■□□□□ 0.84
PCIF1-201ENST00000372409 NBPF4Q96M43 638 aa20.31■□□□□ 0.84
PCIF1-201ENST00000372409 FOXD4L6Q3SYB3 417 aaPredicted RBP20.3■□□□□ 0.84
PCIF1-201ENST00000372409 FOXD4L3Q6VB84 417 aaPredicted RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms