RNA–Protein interactions for RNA: ENST00000372017.3

SNCG-202, Transcript of synuclein gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCG, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-202ENST00000372017 ZNF827Q17R98 1081 aa16.74■□□□□ 0.27
SNCG-202ENST00000372017 CCDC146Q8IYE0 955 aa16.74■□□□□ 0.27
SNCG-202ENST00000372017 SLC4A9Q96Q91 983 aa16.74■□□□□ 0.27
SNCG-202ENST00000372017 SLC52A2Q9HAB3 445 aa16.74■□□□□ 0.27
SNCG-202ENST00000372017 TUBGCP6Q96RT7 1819 aa16.73■□□□□ 0.27
SNCG-202ENST00000372017 C5P01031 1676 aa16.73■□□□□ 0.27
SNCG-202ENST00000372017 DCTN1Q14203 1278 aa16.73■□□□□ 0.27
SNCG-202ENST00000372017 CEMIPQ8WUJ3 1361 aa16.73■□□□□ 0.27
SNCG-202ENST00000372017 SLC27A3Q5K4L6 730 aa16.72■□□□□ 0.27
SNCG-202ENST00000372017 PDGFDQ9GZP0 370 aaPredicted RBP16.72■□□□□ 0.27
SNCG-202ENST00000372017 CCNL1Q9UK58 526 aaPredicted RBP16.72■□□□□ 0.27
SNCG-202ENST00000372017 SLC39A6Q13433 755 aa16.71■□□□□ 0.27
SNCG-202ENST00000372017 WDR43Q15061 677 aaKnown RBP eCLIP16.71■□□□□ 0.27
SNCG-202ENST00000372017 NBPF14Q5TI25 921 aa16.71■□□□□ 0.27
SNCG-202ENST00000372017 MCM10Q7L590 875 aa16.71■□□□□ 0.27
SNCG-202ENST00000372017 SMARCC1Q92922 1105 aaPredicted RBP16.71■□□□□ 0.27
SNCG-202ENST00000372017 AKT1S1Q96B36 256 aa16.71■□□□□ 0.27
SNCG-202ENST00000372017 LOC102724428A0A0B4J2F2 783 aa16.7■□□□□ 0.26
SNCG-202ENST00000372017 SIK1P57059 783 aa16.7■□□□□ 0.26
SNCG-202ENST00000372017 ITPK1Q13572 414 aa16.7■□□□□ 0.26
SNCG-202ENST00000372017 NFE2L2Q16236 605 aa16.7■□□□□ 0.26
SNCG-202ENST00000372017 SLC15A2Q16348 729 aa16.7■□□□□ 0.26
SNCG-202ENST00000372017 CASZ1Q86V15 1759 aa16.69■□□□□ 0.26
SNCG-202ENST00000372017 UBR2Q8IWV8 1755 aa16.69■□□□□ 0.26
SNCG-202ENST00000372017 ZNF831Q5JPB2 1677 aa16.69■□□□□ 0.26
SNCG-202ENST00000372017 PNISRQ8TF01 805 aaKnown RBP16.69■□□□□ 0.26
SNCG-202ENST00000372017 PPP1R1BQ9UD71 204 aaPredicted RBP16.69■□□□□ 0.26
SNCG-202ENST00000372017 TJP1Q07157 1748 aa16.69■□□□□ 0.26
SNCG-202ENST00000372017 KCPQ6ZWJ8 1503 aa16.69■□□□□ 0.26
SNCG-202ENST00000372017 C4BP0C0L5 1744 aa16.68■□□□□ 0.26
SNCG-202ENST00000372017 COL5A3P25940 1745 aaPredicted RBP16.68■□□□□ 0.26
SNCG-202ENST00000372017 LINC00116Q8NCU8 138 aa16.68■□□□□ 0.26
SNCG-202ENST00000372017 MRS2Q9HD23 443 aa16.68■□□□□ 0.26
SNCG-202ENST00000372017 MAPK8IP3Q9UPT6 1336 aa16.68■□□□□ 0.26
SNCG-202ENST00000372017 KCNQ3O43525 872 aa16.67■□□□□ 0.26
SNCG-202ENST00000372017 HTATSF1O43719 755 aaKnown RBP16.67■□□□□ 0.26
SNCG-202ENST00000372017 PTCD1O75127 700 aaKnown RBP16.67■□□□□ 0.26
SNCG-202ENST00000372017 TMPOP42166 694 aaKnown RBP16.67■□□□□ 0.26
SNCG-202ENST00000372017 AMIGO3Q86WK7 504 aa16.67■□□□□ 0.26
SNCG-202ENST00000372017 RUNDC1Q96C34 613 aa16.67■□□□□ 0.26
SNCG-202ENST00000372017 RBM42Q9BTD8 480 aaKnown RBP16.67■□□□□ 0.26
SNCG-202ENST00000372017 THUMPD2Q9BTF0 503 aaKnown RBP16.67■□□□□ 0.26
SNCG-202ENST00000372017 PNNQ9H307 717 aaKnown RBP16.67■□□□□ 0.26
SNCG-202ENST00000372017 STK32BQ9NY57 414 aa16.67■□□□□ 0.26
SNCG-202ENST00000372017 RRP7AQ9Y3A4 280 aaKnown RBP16.67■□□□□ 0.26
SNCG-202ENST00000372017 QSER1Q2KHR3 1735 aa16.67■□□□□ 0.26
SNCG-202ENST00000372017 YY1P25490 414 aa16.66■□□□□ 0.26
SNCG-202ENST00000372017 ATP6V1AP38606 617 aa16.66■□□□□ 0.26
SNCG-202ENST00000372017 SMIM5Q71RC9 77 aa16.66■□□□□ 0.26
SNCG-202ENST00000372017 CICQ96RK0 1608 aaPredicted RBP16.66■□□□□ 0.26
SNCG-202ENST00000372017 RIPK4P57078 832 aa16.65■□□□□ 0.26
SNCG-202ENST00000372017 TEFQ10587 303 aa16.65■□□□□ 0.26
SNCG-202ENST00000372017 RTF1Q92541 710 aaKnown RBP16.65■□□□□ 0.26
SNCG-202ENST00000372017 MYH14Q7Z406 1995 aaKnown RBP16.65■□□□□ 0.26
SNCG-202ENST00000372017 UBR3Q6ZT12 1888 aa16.65■□□□□ 0.26
SNCG-202ENST00000372017 DCAF8L1A6NGE4 600 aa16.64■□□□□ 0.25
SNCG-202ENST00000372017 NEFMP07197 916 aa16.64■□□□□ 0.25
SNCG-202ENST00000372017 NEUROD2Q15784 382 aa16.64■□□□□ 0.25
SNCG-202ENST00000372017 TRIM35Q9UPQ4 493 aa16.64■□□□□ 0.25
SNCG-202ENST00000372017 PNPLA7Q6ZV29 1317 aa16.64■□□□□ 0.25
SNCG-202ENST00000372017 SENP3-EIF4A1A0A087X0R7 540 aa16.63■□□□□ 0.25
SNCG-202ENST00000372017 SPON1Q9HCB6 807 aa16.63■□□□□ 0.25
SNCG-202ENST00000372017 MIS18AQ9NYP9 233 aa16.63■□□□□ 0.25
SNCG-202ENST00000372017 KDM3BQ7LBC6 1761 aa16.62■□□□□ 0.25
SNCG-202ENST00000372017 BTBD11A6QL63 1104 aa16.62■□□□□ 0.25
SNCG-202ENST00000372017 APAF1O14727 1248 aa16.62■□□□□ 0.25
SNCG-202ENST00000372017 ZNF790Q6PG37 636 aa16.62■□□□□ 0.25
SNCG-202ENST00000372017 ZNF496Q96IT1 587 aaPredicted RBP16.61■□□□□ 0.25
SNCG-202ENST00000372017 TAF7Q15545 349 aaPredicted RBP16.6■□□□□ 0.25
SNCG-202ENST00000372017 COL23A1Q86Y22 540 aaPredicted RBP16.6■□□□□ 0.25
SNCG-202ENST00000372017 DNAJC10Q8IXB1 793 aa16.6■□□□□ 0.25
SNCG-202ENST00000372017 TFCP2L1Q9NZI6 479 aa16.6■□□□□ 0.25
SNCG-202ENST00000372017 DIEXFQ68CQ4 756 aaKnown RBP16.59■□□□□ 0.25
SNCG-202ENST00000372017 PRAMEF22A3QJZ6 481 aa16.58■□□□□ 0.24
SNCG-202ENST00000372017 ZBTB7AO95365 584 aa16.58■□□□□ 0.24
SNCG-202ENST00000372017 HEG1Q9ULI3 1381 aa16.58■□□□□ 0.24
SNCG-202ENST00000372017 CYP19A1P11511 503 aaPredicted RBP16.57■□□□□ 0.24
SNCG-202ENST00000372017 INTS5Q6P9B9 1019 aaKnown RBP16.57■□□□□ 0.24
SNCG-202ENST00000372017 FAM9BQ8IZU0 186 aa16.57■□□□□ 0.24
SNCG-202ENST00000372017 TTC5Q8N0Z6 440 aa16.57■□□□□ 0.24
SNCG-202ENST00000372017 AK7Q96M32 723 aa16.57■□□□□ 0.24
SNCG-202ENST00000372017 COL24A1Q17RW2 1714 aa16.56■□□□□ 0.24
SNCG-202ENST00000372017 CNTNAP4Q9C0A0 1308 aa16.56■□□□□ 0.24
SNCG-202ENST00000372017 PHF14O94880 888 aa16.56■□□□□ 0.24
SNCG-202ENST00000372017 CRKLP46109 303 aaKnown RBP16.56■□□□□ 0.24
SNCG-202ENST00000372017 RC3H1Q5TC82 1133 aaKnown RBP16.56■□□□□ 0.24
SNCG-202ENST00000372017 VSIG10Q8N0Z9 540 aa16.56■□□□□ 0.24
SNCG-202ENST00000372017 ATF5Q9Y2D1 282 aaPredicted RBP16.56■□□□□ 0.24
SNCG-202ENST00000372017 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.55■□□□□ 0.24
SNCG-202ENST00000372017 GNPATO15228 680 aa16.55■□□□□ 0.24
SNCG-202ENST00000372017 MIER1Q8N108 512 aa16.55■□□□□ 0.24
SNCG-202ENST00000372017 FMNL2Q96PY5 1086 aa16.55■□□□□ 0.24
SNCG-202ENST00000372017 C4AP0C0L4 1744 aa16.55■□□□□ 0.24
SNCG-202ENST00000372017 PTGER2P43116 358 aa16.54■□□□□ 0.24
SNCG-202ENST00000372017 SGIP1Q9BQI5 828 aa16.54■□□□□ 0.24
SNCG-202ENST00000372017 RPS6KA4O75676 772 aa16.53■□□□□ 0.24
SNCG-202ENST00000372017 EIF4A1P60842 406 aaKnown RBP16.53■□□□□ 0.24
SNCG-202ENST00000372017 LMOD3Q0VAK6 560 aa16.53■□□□□ 0.24
SNCG-202ENST00000372017 ZBTB1Q9Y2K1 713 aa16.53■□□□□ 0.24
SNCG-202ENST00000372017 USP16Q9Y5T5 823 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms