RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 JAKMIP1Q96N16 626 aaKnown RBP17.47■□□□□ 0.39
NDC1-201ENST00000371429 DISP3Q9P2K9 1392 aa17.47■□□□□ 0.39
NDC1-201ENST00000371429 CRACR2BQ8N4Y2 399 aaPredicted RBP17.47■□□□□ 0.39
NDC1-201ENST00000371429 BOLA2Q9H3K6 86 aa17.47■□□□□ 0.39
NDC1-201ENST00000371429 CDKL5O76039 1030 aa17.46■□□□□ 0.39
NDC1-201ENST00000371429 SLC5A1P13866 664 aa17.46■□□□□ 0.39
NDC1-201ENST00000371429 MX1P20591 662 aa17.46■□□□□ 0.39
NDC1-201ENST00000371429 NCKAP5LQ9HCH0 1330 aa17.46■□□□□ 0.39
NDC1-201ENST00000371429 POLR3DP05423 398 aaPredicted RBP17.46■□□□□ 0.39
NDC1-201ENST00000371429 NAP1L1P55209 391 aaKnown RBP17.46■□□□□ 0.39
NDC1-201ENST00000371429 LRRFIP2Q9Y608 721 aaKnown RBP17.46■□□□□ 0.39
NDC1-201ENST00000371429 FAM83GA6ND36 823 aa17.45■□□□□ 0.38
NDC1-201ENST00000371429 MAP3K12Q12852 859 aa17.45■□□□□ 0.38
NDC1-201ENST00000371429 MPHOSPH10O00566 681 aaKnown RBP17.45■□□□□ 0.38
NDC1-201ENST00000371429 CABLES1Q8TDN4 633 aa17.45■□□□□ 0.38
NDC1-201ENST00000371429 ATP5J2-PTCD1G3V325 749 aa17.45■□□□□ 0.38
NDC1-201ENST00000371429 PDRG1Q9NUG6 133 aa17.45■□□□□ 0.38
NDC1-201ENST00000371429 ZMYM3Q14202 1370 aa17.44■□□□□ 0.38
NDC1-201ENST00000371429 ODF2Q5BJF6 829 aa17.44■□□□□ 0.38
NDC1-201ENST00000371429 MAP3K2Q9Y2U5 619 aa17.44■□□□□ 0.38
NDC1-201ENST00000371429 MINDY4BA8MYZ0 360 aa17.44■□□□□ 0.38
NDC1-201ENST00000371429 DDB1Q16531 1140 aa17.44■□□□□ 0.38
NDC1-201ENST00000371429 PPP1R42Q7Z4L9 355 aa17.44■□□□□ 0.38
NDC1-201ENST00000371429 AEBP1Q8IUX7 1158 aa17.44■□□□□ 0.38
NDC1-201ENST00000371429 CDC5LQ99459 802 aaKnown RBP17.44■□□□□ 0.38
NDC1-201ENST00000371429 DDX46Q7L014 1031 aaKnown RBP17.44■□□□□ 0.38
NDC1-201ENST00000371429 CWC25Q9NXE8 425 aaPredicted RBP17.44■□□□□ 0.38
NDC1-201ENST00000371429 PPIP5K1Q6PFW1 1433 aa17.44■□□□□ 0.38
NDC1-201ENST00000371429 MBD3O95983 291 aa17.43■□□□□ 0.38
NDC1-201ENST00000371429 LARP1BQ659C4 914 aaKnown RBP17.43■□□□□ 0.38
NDC1-201ENST00000371429 ACSBG1Q96GR2 724 aa17.43■□□□□ 0.38
NDC1-201ENST00000371429 CCDC8Q9H0W5 538 aaPredicted RBP17.43■□□□□ 0.38
NDC1-201ENST00000371429 MKNK2Q9HBH9 465 aa17.43■□□□□ 0.38
NDC1-201ENST00000371429 NOL7Q9UMY1 257 aaKnown RBP17.43■□□□□ 0.38
NDC1-201ENST00000371429 LDHAL6AQ6ZMR3 332 aa17.43■□□□□ 0.38
NDC1-201ENST00000371429 PTPRCP08575 1304 aa17.43■□□□□ 0.38
NDC1-201ENST00000371429 SMARCA5O60264 1052 aaPredicted RBP17.43■□□□□ 0.38
NDC1-201ENST00000371429 U3KPZ7 1027 aaPredicted RBP17.42■□□□□ 0.38
NDC1-201ENST00000371429 PI4KAP2A4QPH2 592 aa17.42■□□□□ 0.38
NDC1-201ENST00000371429 KCNA6P17658 529 aa17.42■□□□□ 0.38
NDC1-201ENST00000371429 UBE3BQ7Z3V4 1068 aa17.42■□□□□ 0.38
NDC1-201ENST00000371429 PI4KAP1Q8N8J0 262 aa17.42■□□□□ 0.38
NDC1-201ENST00000371429 NAPBQ9H115 298 aa17.42■□□□□ 0.38
NDC1-201ENST00000371429 PIBF1Q8WXW3 757 aa17.42■□□□□ 0.38
NDC1-201ENST00000371429 ZHX3Q9H4I2 956 aa17.42■□□□□ 0.38
NDC1-201ENST00000371429 ME1P48163 572 aa17.41■□□□□ 0.38
NDC1-201ENST00000371429 LRRC59Q96AG4 307 aaKnown RBP17.41■□□□□ 0.38
NDC1-201ENST00000371429 MBIPQ9NS73 344 aa17.41■□□□□ 0.38
NDC1-201ENST00000371429 PRPF40AO75400 957 aaKnown RBP17.41■□□□□ 0.38
NDC1-201ENST00000371429 PDILTQ8N807 584 aa17.41■□□□□ 0.38
NDC1-201ENST00000371429 ZNF622Q969S3 477 aaKnown RBP eCLIP17.41■□□□□ 0.38
NDC1-201ENST00000371429 ZSCAN31Q96LW9 406 aaPredicted RBP17.41■□□□□ 0.38
NDC1-201ENST00000371429 NBPF6Q5VWK0 638 aa17.41■□□□□ 0.38
NDC1-201ENST00000371429 NBPF5PQ86XG9 351 aaPredicted RBP17.41■□□□□ 0.38
NDC1-201ENST00000371429 NBPF4Q96M43 638 aa17.41■□□□□ 0.38
NDC1-201ENST00000371429 UGGT2Q9NYU1 1516 aa17.41■□□□□ 0.38
NDC1-201ENST00000371429 ZFYVE27Q5T4F4 411 aa17.4■□□□□ 0.38
NDC1-201ENST00000371429 WDHD1O75717 1129 aaPredicted RBP17.4■□□□□ 0.38
NDC1-201ENST00000371429 ANXA1P04083 346 aa17.4■□□□□ 0.38
NDC1-201ENST00000371429 SLF2Q8IX21 1173 aa17.4■□□□□ 0.38
NDC1-201ENST00000371429 SMARCC1Q92922 1105 aaPredicted RBP17.4■□□□□ 0.38
NDC1-201ENST00000371429 ANKRD13DQ6ZTN6 518 aa17.4■□□□□ 0.38
NDC1-201ENST00000371429 ZNF76P36508 570 aa17.4■□□□□ 0.38
NDC1-201ENST00000371429 RNF214Q8ND24 703 aa17.4■□□□□ 0.38
NDC1-201ENST00000371429 WDR33Q9C0J8 1336 aaKnown RBP17.4■□□□□ 0.38
NDC1-201ENST00000371429 ABCC2Q92887 1545 aa17.39■□□□□ 0.38
NDC1-201ENST00000371429 MAGEC2Q9UBF1 373 aaPredicted RBP17.39■□□□□ 0.38
NDC1-201ENST00000371429 NKTRP30414 1462 aaKnown RBP17.39■□□□□ 0.37
NDC1-201ENST00000371429 ATP6V1AP38606 617 aa17.39■□□□□ 0.37
NDC1-201ENST00000371429 K7ELQ4 463 aaPredicted RBP17.39■□□□□ 0.37
NDC1-201ENST00000371429 TBX22Q9Y458 520 aa17.39■□□□□ 0.37
NDC1-201ENST00000371429 LMTK3Q96Q04 1460 aa17.39■□□□□ 0.37
NDC1-201ENST00000371429 ADAMTS12P58397 1594 aa17.39■□□□□ 0.37
NDC1-201ENST00000371429 KRT85P78386 507 aa17.38■□□□□ 0.37
NDC1-201ENST00000371429 CAVIN1Q6NZI2 390 aaKnown RBP17.38■□□□□ 0.37
NDC1-201ENST00000371429 KRI1Q8N9T8 703 aaKnown RBP17.38■□□□□ 0.37
NDC1-201ENST00000371429 LETM1O95202 739 aaPredicted RBP17.38■□□□□ 0.37
NDC1-201ENST00000371429 FILIP1LQ4L180 1135 aa17.38■□□□□ 0.37
NDC1-201ENST00000371429 WASF1Q92558 559 aa17.38■□□□□ 0.37
NDC1-201ENST00000371429 PIK3R4Q99570 1358 aa17.38■□□□□ 0.37
NDC1-201ENST00000371429 IL2RBP14784 551 aa17.38■□□□□ 0.37
NDC1-201ENST00000371429 PIP4K2AP48426 406 aaPredicted RBP17.38■□□□□ 0.37
NDC1-201ENST00000371429 KIAA0556O60303 1618 aa17.38■□□□□ 0.37
NDC1-201ENST00000371429 TRIM27P14373 513 aa17.37■□□□□ 0.37
NDC1-201ENST00000371429 SLC39A6Q13433 755 aa17.37■□□□□ 0.37
NDC1-201ENST00000371429 TTLL12Q14166 644 aaPredicted RBP17.37■□□□□ 0.37
NDC1-201ENST00000371429 PTPRKQ15262 1439 aa17.37■□□□□ 0.37
NDC1-201ENST00000371429 SSBP05455 408 aaKnown RBP eCLIP17.37■□□□□ 0.37
NDC1-201ENST00000371429 CASTP20810 708 aaKnown RBP17.37■□□□□ 0.37
NDC1-201ENST00000371429 ST5P78524 1137 aa17.37■□□□□ 0.37
NDC1-201ENST00000371429 NFKBIBQ15653 356 aa17.37■□□□□ 0.37
NDC1-201ENST00000371429 FAM13BQ9NYF5 915 aa17.37■□□□□ 0.37
NDC1-201ENST00000371429 ITSN2Q9NZM3 1697 aa17.37■□□□□ 0.37
NDC1-201ENST00000371429 GCP02774 474 aa17.36■□□□□ 0.37
NDC1-201ENST00000371429 ZNF444Q8N0Y2 327 aaPredicted RBP17.36■□□□□ 0.37
NDC1-201ENST00000371429 AKAP4Q5JQC9 854 aa17.36■□□□□ 0.37
NDC1-201ENST00000371429 PRPF40BQ6NWY9 871 aaKnown RBP17.36■□□□□ 0.37
NDC1-201ENST00000371429 TRIM5Q9C035 493 aa17.36■□□□□ 0.37
NDC1-201ENST00000371429 BMP2KQ9NSY1 1161 aaPredicted RBP17.36■□□□□ 0.37
NDC1-201ENST00000371429 ZRANB1Q9UGI0 708 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms