RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 CCDC69A6NI79 296 aa14□□□□□ -0.17
DEPDC1-201ENST00000370966 DACH1Q9UI36 760 aa14□□□□□ -0.17
DEPDC1-201ENST00000370966 TRAPPC8Q9Y2L5 1435 aa14□□□□□ -0.17
DEPDC1-201ENST00000370966 FOXO3O43524 673 aa14□□□□□ -0.17
DEPDC1-201ENST00000370966 ZNF771Q7L3S4 317 aaPredicted RBP14□□□□□ -0.17
DEPDC1-201ENST00000370966 TTC21AQ8NDW8 1320 aa13.99□□□□□ -0.17
DEPDC1-201ENST00000370966 PCDHB15Q9Y5E8 787 aa13.99□□□□□ -0.17
DEPDC1-201ENST00000370966 IMMTQ16891 758 aaKnown RBP13.99□□□□□ -0.17
DEPDC1-201ENST00000370966 CCDC43Q96MW1 224 aaKnown RBP13.99□□□□□ -0.17
DEPDC1-201ENST00000370966 SCAND2PQ9GZW5 306 aaPredicted RBP13.99□□□□□ -0.17
DEPDC1-201ENST00000370966 ASXL2Q76L83 1435 aa13.99□□□□□ -0.17
DEPDC1-201ENST00000370966 CEP57L1Q8IYX8 460 aa13.99□□□□□ -0.17
DEPDC1-201ENST00000370966 SMARCE1Q969G3 411 aa13.99□□□□□ -0.17
DEPDC1-201ENST00000370966 NUCB1Q02818 461 aa13.98□□□□□ -0.17
DEPDC1-201ENST00000370966 PRPF40BQ6NWY9 871 aaKnown RBP13.98□□□□□ -0.17
DEPDC1-201ENST00000370966 ECHDC1Q9NTX5 307 aa13.98□□□□□ -0.17
DEPDC1-201ENST00000370966 LIMCH1Q9UPQ0 1083 aa13.98□□□□□ -0.17
DEPDC1-201ENST00000370966 UHRF1BP1Q6BDS2 1440 aa13.98□□□□□ -0.17
DEPDC1-201ENST00000370966 PIK3R4Q99570 1358 aa13.98□□□□□ -0.17
DEPDC1-201ENST00000370966 MPRIPQ6WCQ1 1025 aa13.98□□□□□ -0.17
DEPDC1-201ENST00000370966 USHBP1Q8N6Y0 703 aa13.98□□□□□ -0.17
DEPDC1-201ENST00000370966 BOLA2Q9H3K6 86 aa13.98□□□□□ -0.17
DEPDC1-201ENST00000370966 OFD1O75665 1012 aa13.98□□□□□ -0.17
DEPDC1-201ENST00000370966 SPC24Q8NBT2 197 aa13.98□□□□□ -0.17
DEPDC1-201ENST00000370966 HMGB1P09429 215 aaKnown RBP13.97□□□□□ -0.17
DEPDC1-201ENST00000370966 MAP3K11Q16584 847 aa13.97□□□□□ -0.17
DEPDC1-201ENST00000370966 WASF1Q92558 559 aa13.97□□□□□ -0.17
DEPDC1-201ENST00000370966 NPC1L1Q9UHC9 1359 aa13.97□□□□□ -0.17
DEPDC1-201ENST00000370966 PZPP20742 1482 aa13.97□□□□□ -0.17
DEPDC1-201ENST00000370966 FAM83GA6ND36 823 aa13.97□□□□□ -0.17
DEPDC1-201ENST00000370966 KDM4AO75164 1064 aa13.97□□□□□ -0.17
DEPDC1-201ENST00000370966 PDE4CQ08493 712 aa13.97□□□□□ -0.17
DEPDC1-201ENST00000370966 HSP90B2PQ58FF3 399 aa13.97□□□□□ -0.17
DEPDC1-201ENST00000370966 TTC22Q5TAA0 569 aa13.97□□□□□ -0.17
DEPDC1-201ENST00000370966 ZSCAN30Q86W11 494 aa13.97□□□□□ -0.17
DEPDC1-201ENST00000370966 CCDC83Q8IWF9 413 aa13.97□□□□□ -0.17
DEPDC1-201ENST00000370966 TNPO1Q92973 898 aaKnown RBP13.97□□□□□ -0.17
DEPDC1-201ENST00000370966 ABCC10Q5T3U5 1492 aa13.97□□□□□ -0.17
DEPDC1-201ENST00000370966 WDR7Q9Y4E6 1490 aa13.97□□□□□ -0.17
DEPDC1-201ENST00000370966 SERPINC1P01008 464 aa13.97□□□□□ -0.17
DEPDC1-201ENST00000370966 MYD88Q99836 296 aa13.97□□□□□ -0.17
DEPDC1-201ENST00000370966 UBAC1Q9BSL1 405 aa13.97□□□□□ -0.17
DEPDC1-201ENST00000370966 NOL7Q9UMY1 257 aaKnown RBP13.97□□□□□ -0.17
DEPDC1-201ENST00000370966 TNRQ92752 1358 aa13.97□□□□□ -0.17
DEPDC1-201ENST00000370966 MTMR7Q9Y216 660 aa13.96□□□□□ -0.17
DEPDC1-201ENST00000370966 TDO2P48775 406 aa13.96□□□□□ -0.17
DEPDC1-201ENST00000370966 EVI5LQ96CN4 794 aa13.96□□□□□ -0.17
DEPDC1-201ENST00000370966 PTCD1O75127 700 aaKnown RBP13.96□□□□□ -0.18
DEPDC1-201ENST00000370966 UHRF1BP1LA0JNW5 1464 aa13.96□□□□□ -0.18
DEPDC1-201ENST00000370966 SYCE3A1L190 88 aa13.95□□□□□ -0.18
DEPDC1-201ENST00000370966 IDH1O75874 414 aaKnown RBP13.95□□□□□ -0.18
DEPDC1-201ENST00000370966 METTL24Q5JXM2 366 aa13.95□□□□□ -0.18
DEPDC1-201ENST00000370966 MAGEC2Q9UBF1 373 aaPredicted RBP13.95□□□□□ -0.18
DEPDC1-201ENST00000370966 IFIT1P09914 478 aaKnown RBP13.95□□□□□ -0.18
DEPDC1-201ENST00000370966 IGHMBP2P38935 993 aaKnown RBP13.95□□□□□ -0.18
DEPDC1-201ENST00000370966 CEBPAP49715 358 aaPredicted RBP13.95□□□□□ -0.18
DEPDC1-201ENST00000370966 ANKRD44Q8N8A2 993 aa13.95□□□□□ -0.18
DEPDC1-201ENST00000370966 DNMT1P26358 1616 aaKnown RBP13.95□□□□□ -0.18
DEPDC1-201ENST00000370966 NAP1L1P55209 391 aaKnown RBP13.95□□□□□ -0.18
DEPDC1-201ENST00000370966 CDK5RAP3Q96JB5 506 aa13.95□□□□□ -0.18
DEPDC1-201ENST00000370966 ADGRL2O95490 1459 aa13.95□□□□□ -0.18
DEPDC1-201ENST00000370966 CBFA2T2O43439 604 aa13.95□□□□□ -0.18
DEPDC1-201ENST00000370966 AIDAQ96BJ3 306 aa13.95□□□□□ -0.18
DEPDC1-201ENST00000370966 POLKQ9UBT6 870 aa13.95□□□□□ -0.18
DEPDC1-201ENST00000370966 SSFA2P28290 1259 aa13.94□□□□□ -0.18
DEPDC1-201ENST00000370966 EPS15P42566 896 aa13.94□□□□□ -0.18
DEPDC1-201ENST00000370966 HSP90AB3PQ58FF7 597 aa13.94□□□□□ -0.18
DEPDC1-201ENST00000370966 HSP90AB2PQ58FF8 381 aa13.94□□□□□ -0.18
DEPDC1-201ENST00000370966 FERMT3Q86UX7 667 aa13.94□□□□□ -0.18
DEPDC1-201ENST00000370966 NUP133Q8WUM0 1156 aa13.94□□□□□ -0.18
DEPDC1-201ENST00000370966 CARD14Q9BXL6 1004 aa13.94□□□□□ -0.18
DEPDC1-201ENST00000370966 TMOD3Q9NYL9 352 aa13.94□□□□□ -0.18
DEPDC1-201ENST00000370966 LRP2BPQ9P2M1 347 aa13.94□□□□□ -0.18
DEPDC1-201ENST00000370966 PI4KAP2A4QPH2 592 aa13.94□□□□□ -0.18
DEPDC1-201ENST00000370966 STIM1Q13586 685 aa13.94□□□□□ -0.18
DEPDC1-201ENST00000370966 CCDC183Q5T5S1 534 aa13.94□□□□□ -0.18
DEPDC1-201ENST00000370966 PPP1R42Q7Z4L9 355 aa13.94□□□□□ -0.18
DEPDC1-201ENST00000370966 PI4KAP1Q8N8J0 262 aa13.94□□□□□ -0.18
DEPDC1-201ENST00000370966 COL17A1Q9UMD9 1497 aaPredicted RBP13.94□□□□□ -0.18
DEPDC1-201ENST00000370966 RUFY1Q96T51 708 aa13.93□□□□□ -0.18
DEPDC1-201ENST00000370966 CCDC8Q9H0W5 538 aaPredicted RBP13.93□□□□□ -0.18
DEPDC1-201ENST00000370966 A0A087WZG4 1122 aa13.93□□□□□ -0.18
DEPDC1-201ENST00000370966 IFNL2Q8IZJ0 200 aa13.93□□□□□ -0.18
DEPDC1-201ENST00000370966 ERCC4Q92889 916 aaPredicted RBP13.93□□□□□ -0.18
DEPDC1-201ENST00000370966 DDX11Q96FC9 970 aa13.93□□□□□ -0.18
DEPDC1-201ENST00000370966 IKQ13123 557 aaPredicted RBP13.93□□□□□ -0.18
DEPDC1-201ENST00000370966 MRPL50Q8N5N7 158 aaKnown RBP13.93□□□□□ -0.18
DEPDC1-201ENST00000370966 SMTNL1A8MU46 457 aa13.92□□□□□ -0.18
DEPDC1-201ENST00000370966 IFIT5Q13325 482 aaKnown RBP13.92□□□□□ -0.18
DEPDC1-201ENST00000370966 NCBP3Q53F19 620 aaKnown RBP13.92□□□□□ -0.18
DEPDC1-201ENST00000370966 CCDC112Q8NEF3 446 aa13.92□□□□□ -0.18
DEPDC1-201ENST00000370966 AK7Q96M32 723 aa13.92□□□□□ -0.18
DEPDC1-201ENST00000370966 CDR1P51861 262 aa13.92□□□□□ -0.18
DEPDC1-201ENST00000370966 PPFIBP1Q86W92 1011 aa13.92□□□□□ -0.18
DEPDC1-201ENST00000370966 CCAR1Q8IX12 1150 aaKnown RBP13.92□□□□□ -0.18
DEPDC1-201ENST00000370966 ZNHIT6Q9NWK9 470 aaKnown RBP13.92□□□□□ -0.18
DEPDC1-201ENST00000370966 RAI14Q9P0K7 980 aa13.92□□□□□ -0.18
DEPDC1-201ENST00000370966 MEIS3Q99687 375 aa13.91□□□□□ -0.18
DEPDC1-201ENST00000370966 MAP3K2Q9Y2U5 619 aa13.91□□□□□ -0.18
DEPDC1-201ENST00000370966 PPIP5K1Q6PFW1 1433 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 989.2 ms