RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 ZC3H6P61129 1189 aaKnown RBP16■□□□□ 0.15
GPC3-201ENST00000370818 PLEKHO1Q53GL0 409 aaPredicted RBP16■□□□□ 0.15
GPC3-201ENST00000370818 AKAP4Q5JQC9 854 aa16■□□□□ 0.15
GPC3-201ENST00000370818 ZNF530Q6P9A1 599 aaPredicted RBP16■□□□□ 0.15
GPC3-201ENST00000370818 PXDNQ92626 1479 aa15.99■□□□□ 0.15
GPC3-201ENST00000370818 NECTIN2Q92692 538 aa15.99■□□□□ 0.15
GPC3-201ENST00000370818 ERBB3P21860 1342 aa15.99■□□□□ 0.15
GPC3-201ENST00000370818 FLIIQ13045 1269 aa15.99■□□□□ 0.15
GPC3-201ENST00000370818 AMOTQ4VCS5 1084 aa15.99■□□□□ 0.15
GPC3-201ENST00000370818 CAMTA1Q9Y6Y1 1673 aa15.99■□□□□ 0.15
GPC3-201ENST00000370818 HSP90AA2PQ14568 343 aaPredicted RBP15.98■□□□□ 0.15
GPC3-201ENST00000370818 ANKRD44Q8N8A2 993 aa15.98■□□□□ 0.15
GPC3-201ENST00000370818 FAM208AQ9UK61 1670 aaKnown RBP15.98■□□□□ 0.15
GPC3-201ENST00000370818 CEP85Q6P2H3 762 aa15.98■□□□□ 0.15
GPC3-201ENST00000370818 MPRIPQ6WCQ1 1025 aa15.98■□□□□ 0.15
GPC3-201ENST00000370818 DCTPP1Q9H773 170 aa15.98■□□□□ 0.15
GPC3-201ENST00000370818 LMO7Q8WWI1 1683 aa15.98■□□□□ 0.15
GPC3-201ENST00000370818 NPHP3Q7Z494 1330 aa15.98■□□□□ 0.15
GPC3-201ENST00000370818 RRP9O43818 475 aaKnown RBP15.97■□□□□ 0.15
GPC3-201ENST00000370818 SLC4A10Q6U841 1118 aa15.97■□□□□ 0.15
GPC3-201ENST00000370818 CCT4P50991 539 aaKnown RBP15.97■□□□□ 0.15
GPC3-201ENST00000370818 EIF4A1P60842 406 aaKnown RBP15.97■□□□□ 0.15
GPC3-201ENST00000370818 RPAP2Q8IXW5 612 aaPredicted RBP15.97■□□□□ 0.15
GPC3-201ENST00000370818 KDM4FA0A1W2PPD8 638 aa15.96■□□□□ 0.15
GPC3-201ENST00000370818 TBC1D32Q96NH3 1257 aa15.96■□□□□ 0.15
GPC3-201ENST00000370818 LMTK3Q96Q04 1460 aa15.96■□□□□ 0.15
GPC3-201ENST00000370818 KCNQ3O43525 872 aa15.96■□□□□ 0.15
GPC3-201ENST00000370818 TNS3Q68CZ2 1445 aa15.95■□□□□ 0.14
GPC3-201ENST00000370818 RNMTO43148 476 aaKnown RBP15.95■□□□□ 0.14
GPC3-201ENST00000370818 FKBP5Q13451 457 aaPredicted RBP15.95■□□□□ 0.14
GPC3-201ENST00000370818 HDGFL1Q5TGJ6 251 aa15.95■□□□□ 0.14
GPC3-201ENST00000370818 CABLES1Q8TDN4 633 aa15.95■□□□□ 0.14
GPC3-201ENST00000370818 RGPD5Q99666 1765 aa15.94■□□□□ 0.14
GPC3-201ENST00000370818 TEFQ10587 303 aa15.94■□□□□ 0.14
GPC3-201ENST00000370818 BMP2KLQ5H9B9 411 aa15.94■□□□□ 0.14
GPC3-201ENST00000370818 C1orf141Q5JVX7 400 aa15.94■□□□□ 0.14
GPC3-201ENST00000370818 UPF2Q9HAU5 1272 aaKnown RBP15.94■□□□□ 0.14
GPC3-201ENST00000370818 SPATA31A3Q5VYP0 1347 aa15.94■□□□□ 0.14
GPC3-201ENST00000370818 KDM3BQ7LBC6 1761 aa15.93■□□□□ 0.14
GPC3-201ENST00000370818 BTBD11A6QL63 1104 aa15.93■□□□□ 0.14
GPC3-201ENST00000370818 NAP1L5Q96NT1 182 aaPredicted RBP15.93■□□□□ 0.14
GPC3-201ENST00000370818 XIRP1Q702N8 1843 aaKnown RBP15.93■□□□□ 0.14
GPC3-201ENST00000370818 HSP90AA1P07900 732 aaKnown RBP15.93■□□□□ 0.14
GPC3-201ENST00000370818 L1TD1Q5T7N2 865 aaKnown RBP15.93■□□□□ 0.14
GPC3-201ENST00000370818 OVOS2A0A0G2JMS6 1433 aa15.93■□□□□ 0.14
GPC3-201ENST00000370818 HOXB7P09629 217 aa15.92■□□□□ 0.14
GPC3-201ENST00000370818 STRCQ7RTU9 1775 aa15.92■□□□□ 0.14
GPC3-201ENST00000370818 BRINP3Q76B58 766 aa15.92■□□□□ 0.14
GPC3-201ENST00000370818 PHAXQ9H814 394 aaKnown RBP15.92■□□□□ 0.14
GPC3-201ENST00000370818 COL18A1P39060 1754 aa15.92■□□□□ 0.14
GPC3-201ENST00000370818 EIF2S2P20042 333 aaKnown RBP15.91■□□□□ 0.14
GPC3-201ENST00000370818 CLCN1P35523 988 aa15.9■□□□□ 0.14
GPC3-201ENST00000370818 MFAP1P55081 439 aaKnown RBP15.9■□□□□ 0.14
GPC3-201ENST00000370818 NLRP2Q9NX02 1062 aa15.9■□□□□ 0.14
GPC3-201ENST00000370818 CHRNA2Q15822 529 aa15.9■□□□□ 0.14
GPC3-201ENST00000370818 PLEKHM2Q8IWE5 1019 aa15.9■□□□□ 0.14
GPC3-201ENST00000370818 CACNA1FO60840 1977 aa15.9■□□□□ 0.14
GPC3-201ENST00000370818 CHPF2Q9P2E5 772 aa15.89■□□□□ 0.13
GPC3-201ENST00000370818 PXDNLA1KZ92 1463 aa15.89■□□□□ 0.13
GPC3-201ENST00000370818 GNAI2P04899 355 aa15.89■□□□□ 0.13
GPC3-201ENST00000370818 C16orf71Q8IYS4 520 aaPredicted RBP15.89■□□□□ 0.13
GPC3-201ENST00000370818 ZNF335Q9H4Z2 1342 aaPredicted RBP15.89■□□□□ 0.13
GPC3-201ENST00000370818 RAPGEF4Q8WZA2 1011 aa15.88■□□□□ 0.13
GPC3-201ENST00000370818 CRYBG1Q9Y4K1 1723 aa15.88■□□□□ 0.13
GPC3-201ENST00000370818 ADAMTS7Q9UKP4 1686 aa15.88■□□□□ 0.13
GPC3-201ENST00000370818 HEG1Q9ULI3 1381 aa15.88■□□□□ 0.13
GPC3-201ENST00000370818 MEGF6O75095 1541 aa15.88■□□□□ 0.13
GPC3-201ENST00000370818 C22orf23Q9BZE7 217 aa15.88■□□□□ 0.13
GPC3-201ENST00000370818 PODXL2Q9NZ53 605 aa15.88■□□□□ 0.13
GPC3-201ENST00000370818 CPDO75976 1380 aa15.88■□□□□ 0.13
GPC3-201ENST00000370818 GSPT1P15170 499 aaKnown RBP15.87■□□□□ 0.13
GPC3-201ENST00000370818 GNAI3P08754 354 aa15.87■□□□□ 0.13
GPC3-201ENST00000370818 OTUD7AQ8TE49 926 aaPredicted RBP15.87■□□□□ 0.13
GPC3-201ENST00000370818 USP44Q9H0E7 712 aa15.87■□□□□ 0.13
GPC3-201ENST00000370818 HMMRO75330 724 aa15.86■□□□□ 0.13
GPC3-201ENST00000370818 GIGYF1O75420 1035 aaPredicted RBP15.86■□□□□ 0.13
GPC3-201ENST00000370818 ABCC6O95255 1503 aa15.86■□□□□ 0.13
GPC3-201ENST00000370818 SMARCA5O60264 1052 aaPredicted RBP15.86■□□□□ 0.13
GPC3-201ENST00000370818 KDM6AO15550 1401 aaPredicted RBP15.86■□□□□ 0.13
GPC3-201ENST00000370818 N4BP2Q86UW6 1770 aaPredicted RBP15.86■□□□□ 0.13
GPC3-201ENST00000370818 ANXA1P04083 346 aa15.85■□□□□ 0.13
GPC3-201ENST00000370818 CSB-PGBD3P0DP91 1061 aa15.85■□□□□ 0.13
GPC3-201ENST00000370818 XRCC6P12956 609 aaKnown RBP eCLIP15.85■□□□□ 0.132e-6■■■■□ 20.1
GPC3-201ENST00000370818 CHMP4AQ9BY43 222 aa15.85■□□□□ 0.13
GPC3-201ENST00000370818 SLAIN2Q9P270 581 aa15.85■□□□□ 0.13
GPC3-201ENST00000370818 SIPA1L3O60292 1781 aaPredicted RBP15.85■□□□□ 0.13
GPC3-201ENST00000370818 APBB1O00213 710 aa15.85■□□□□ 0.13
GPC3-201ENST00000370818 PHKG2P15735 406 aa15.85■□□□□ 0.13
GPC3-201ENST00000370818 TATP17735 454 aaPredicted RBP15.85■□□□□ 0.13
GPC3-201ENST00000370818 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.85■□□□□ 0.137e-10■■□□□ 11.6
GPC3-201ENST00000370818 PNMA6EA0A0J9YXQ4 647 aa15.84■□□□□ 0.13
GPC3-201ENST00000370818 PRAMEF22A3QJZ6 481 aa15.84■□□□□ 0.13
GPC3-201ENST00000370818 TBC1D9Q6ZT07 1266 aa15.84■□□□□ 0.13
GPC3-201ENST00000370818 SOS2Q07890 1332 aaPredicted RBP15.84■□□□□ 0.13
GPC3-201ENST00000370818 LRRFIP2Q9Y608 721 aaKnown RBP15.84■□□□□ 0.13
GPC3-201ENST00000370818 PI4KAP2A4QPH2 592 aa15.83■□□□□ 0.13
GPC3-201ENST00000370818 ATP8B2P98198 1209 aa15.83■□□□□ 0.13
GPC3-201ENST00000370818 BECN1Q14457 450 aa15.83■□□□□ 0.13
GPC3-201ENST00000370818 TTC22Q5TAA0 569 aa15.83■□□□□ 0.13
GPC3-201ENST00000370818 PI4KAP1Q8N8J0 262 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms