RNA–Protein interactions for RNA: ENST00000369797.7

PDCD11-201, Transcript of programmed cell death 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD11, Length 6,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-201ENST00000369797 ATAD2Q6PL18 1390 aa13.22□□□□□ -0.29
PDCD11-201ENST00000369797 GPTP24298 496 aa13.21□□□□□ -0.29
PDCD11-201ENST00000369797 NBPF8Q3BBV2 869 aa13.21□□□□□ -0.29
PDCD11-201ENST00000369797 KIAA1328Q86T90 577 aa13.21□□□□□ -0.29
PDCD11-201ENST00000369797 C6orf229H3BNL8 230 aa13.21□□□□□ -0.29
PDCD11-201ENST00000369797 TMEM87AQ8NBN3 555 aa13.21□□□□□ -0.29
PDCD11-201ENST00000369797 LEKR1Q6ZMV7 388 aa13.21□□□□□ -0.29
PDCD11-201ENST00000369797 ZNF444Q8N0Y2 327 aaPredicted RBP13.21□□□□□ -0.29
PDCD11-201ENST00000369797 PPP6R1Q9UPN7 881 aa13.21□□□□□ -0.29
PDCD11-201ENST00000369797 IFIT5Q13325 482 aaKnown RBP13.21□□□□□ -0.29
PDCD11-201ENST00000369797 LARP1Q6PKG0 1096 aaKnown RBP13.21□□□□□ -0.29
PDCD11-201ENST00000369797 TMEM57Q8N5G2 664 aa13.21□□□□□ -0.29
PDCD11-201ENST00000369797 NUP62CLQ9H1M0 184 aa13.21□□□□□ -0.29
PDCD11-201ENST00000369797 ANKRD30BQ9BXX2 1392 aa13.2□□□□□ -0.3
PDCD11-201ENST00000369797 POTEJP0CG39 1038 aa13.2□□□□□ -0.3
PDCD11-201ENST00000369797 TAF3Q5VWG9 929 aa13.2□□□□□ -0.3
PDCD11-201ENST00000369797 PRPF40BQ6NWY9 871 aaKnown RBP13.2□□□□□ -0.3
PDCD11-201ENST00000369797 TAF4BQ92750 862 aa13.2□□□□□ -0.3
PDCD11-201ENST00000369797 PPP1R12BO60237 982 aaPredicted RBP13.2□□□□□ -0.3
PDCD11-201ENST00000369797 TMPOP42166 694 aaKnown RBP13.2□□□□□ -0.3
PDCD11-201ENST00000369797 CEP131Q9UPN4 1083 aa13.2□□□□□ -0.3
PDCD11-201ENST00000369797 CAMK4Q16566 473 aa13.2□□□□□ -0.3
PDCD11-201ENST00000369797 CCDC83Q8IWF9 413 aa13.2□□□□□ -0.3
PDCD11-201ENST00000369797 U3KPZ7 1027 aaPredicted RBP13.2□□□□□ -0.3
PDCD11-201ENST00000369797 AKNAQ7Z591 1439 aa13.2□□□□□ -0.3
PDCD11-201ENST00000369797 RBM10P98175 930 aaKnown RBP13.2□□□□□ -0.3
PDCD11-201ENST00000369797 KLHL10Q6JEL2 608 aa13.2□□□□□ -0.3
PDCD11-201ENST00000369797 CCDC8Q9H0W5 538 aaPredicted RBP13.2□□□□□ -0.3
PDCD11-201ENST00000369797 EZRP15311 586 aaKnown RBP13.19□□□□□ -0.3
PDCD11-201ENST00000369797 GBP2P32456 591 aaPredicted RBP13.19□□□□□ -0.3
PDCD11-201ENST00000369797 RPAP2Q8IXW5 612 aaPredicted RBP13.19□□□□□ -0.3
PDCD11-201ENST00000369797 KIF1BPQ96EK5 621 aa13.19□□□□□ -0.3
PDCD11-201ENST00000369797 NSD3Q9BZ95 1437 aa13.19□□□□□ -0.3
PDCD11-201ENST00000369797 EPB41L2O43491 1005 aaKnown RBP13.19□□□□□ -0.3
PDCD11-201ENST00000369797 GUCY1B3Q02153 619 aa13.19□□□□□ -0.3
PDCD11-201ENST00000369797 SLC4A8Q2Y0W8 1093 aa13.19□□□□□ -0.3
PDCD11-201ENST00000369797 KIAA1107Q9UPP5 1409 aa13.19□□□□□ -0.3
PDCD11-201ENST00000369797 HMGB2P26583 209 aaKnown RBP13.19□□□□□ -0.3
PDCD11-201ENST00000369797 MAP3K12Q12852 859 aa13.19□□□□□ -0.3
PDCD11-201ENST00000369797 CFAP100Q494V2 611 aa13.19□□□□□ -0.3
PDCD11-201ENST00000369797 CCDC112Q8NEF3 446 aa13.19□□□□□ -0.3
PDCD11-201ENST00000369797 CTCFLQ8NI51 663 aaPredicted RBP13.19□□□□□ -0.3
PDCD11-201ENST00000369797 SLC5A1P13866 664 aa13.18□□□□□ -0.3
PDCD11-201ENST00000369797 JAKMIP3Q5VZ66 844 aa13.18□□□□□ -0.3
PDCD11-201ENST00000369797 CUL5Q93034 780 aa13.18□□□□□ -0.3
PDCD11-201ENST00000369797 TAF7Q15545 349 aaPredicted RBP13.18□□□□□ -0.3
PDCD11-201ENST00000369797 ZBTB3Q9H5J0 574 aa13.18□□□□□ -0.3
PDCD11-201ENST00000369797 KIF21BO75037 1637 aa13.18□□□□□ -0.3
PDCD11-201ENST00000369797 RPGRIP1LQ68CZ1 1315 aa13.18□□□□□ -0.3
PDCD11-201ENST00000369797 EXOC5O00471 708 aa13.18□□□□□ -0.3
PDCD11-201ENST00000369797 FEZ1Q99689 392 aa13.18□□□□□ -0.3
PDCD11-201ENST00000369797 NME9Q86XW9 330 aa13.17□□□□□ -0.3
PDCD11-201ENST00000369797 F6X3S4 739 aa13.17□□□□□ -0.3
PDCD11-201ENST00000369797 MX1P20591 662 aa13.17□□□□□ -0.3
PDCD11-201ENST00000369797 ANAPC15P60006 121 aa13.17□□□□□ -0.3
PDCD11-201ENST00000369797 SMTNL1A8MU46 457 aa13.17□□□□□ -0.3
PDCD11-201ENST00000369797 ZNF397Q8NF99 534 aaPredicted RBP13.17□□□□□ -0.3
PDCD11-201ENST00000369797 ZNF622Q969S3 477 aaKnown RBP eCLIP13.17□□□□□ -0.36e-7■■■■□ 24.4
PDCD11-201ENST00000369797 ANKRD18BA2A2Z9 1011 aa13.17□□□□□ -0.3
PDCD11-201ENST00000369797 ARHGAP29Q52LW3 1261 aa13.16□□□□□ -0.3
PDCD11-201ENST00000369797 PLEKHH2Q8IVE3 1493 aa13.16□□□□□ -0.3
PDCD11-201ENST00000369797 ERLIN1O75477 346 aa13.16□□□□□ -0.3
PDCD11-201ENST00000369797 GLRX3O76003 335 aaKnown RBP13.16□□□□□ -0.3
PDCD11-201ENST00000369797 IQCA1Q86XH1 822 aa13.16□□□□□ -0.3
PDCD11-201ENST00000369797 PHF8Q9UPP1 1060 aa13.16□□□□□ -0.3
PDCD11-201ENST00000369797 KIAA0754O94854 1291 aa13.16□□□□□ -0.3
PDCD11-201ENST00000369797 GRM1Q13255 1194 aa13.16□□□□□ -0.3
PDCD11-201ENST00000369797 HSP90AB3PQ58FF7 597 aa13.16□□□□□ -0.3
PDCD11-201ENST00000369797 DNAI2Q9GZS0 605 aa13.16□□□□□ -0.3
PDCD11-201ENST00000369797 VAT1LQ9HCJ6 419 aa13.16□□□□□ -0.3
PDCD11-201ENST00000369797 CETN2P41208 172 aa13.15□□□□□ -0.3
PDCD11-201ENST00000369797 CEBPAP49715 358 aaPredicted RBP13.15□□□□□ -0.3
PDCD11-201ENST00000369797 DNA2P51530 1060 aa13.15□□□□□ -0.3
PDCD11-201ENST00000369797 TSG101Q99816 390 aa13.15□□□□□ -0.3
PDCD11-201ENST00000369797 SLC12A7Q9Y666 1083 aa13.15□□□□□ -0.3
PDCD11-201ENST00000369797 A0A087WZG4 1122 aa13.15□□□□□ -0.3
PDCD11-201ENST00000369797 ZNF213O14771 459 aa13.15□□□□□ -0.3
PDCD11-201ENST00000369797 HMGN5P82970 282 aaKnown RBP13.15□□□□□ -0.3
PDCD11-201ENST00000369797 AMOTQ4VCS5 1084 aa13.15□□□□□ -0.3
PDCD11-201ENST00000369797 IQCEQ6IPM2 695 aa13.15□□□□□ -0.3
PDCD11-201ENST00000369797 CACNA2D4Q7Z3S7 1137 aa13.15□□□□□ -0.31
PDCD11-201ENST00000369797 MACROD2A1Z1Q3 448 aa13.14□□□□□ -0.31
PDCD11-201ENST00000369797 BRPF3Q9ULD4 1205 aa13.14□□□□□ -0.31
PDCD11-201ENST00000369797 NLRP5P59047 1200 aa13.14□□□□□ -0.31
PDCD11-201ENST00000369797 AMOTL2Q9Y2J4 779 aa13.14□□□□□ -0.31
PDCD11-201ENST00000369797 CCDC196A0A1B0GTZ2 297 aa13.14□□□□□ -0.31
PDCD11-201ENST00000369797 IFIT3O14879 490 aaKnown RBP13.14□□□□□ -0.31
PDCD11-201ENST00000369797 RAB11FIP3O75154 756 aa13.14□□□□□ -0.31
PDCD11-201ENST00000369797 C8orf76Q96K31 380 aa13.14□□□□□ -0.31
PDCD11-201ENST00000369797 EMILIN1Q9Y6C2 1016 aa13.14□□□□□ -0.31
PDCD11-201ENST00000369797 MAP3K11Q16584 847 aa13.13□□□□□ -0.31
PDCD11-201ENST00000369797 TMEM266Q2M3C6 531 aa13.13□□□□□ -0.31
PDCD11-201ENST00000369797 SLF2Q8IX21 1173 aa13.13□□□□□ -0.31
PDCD11-201ENST00000369797 GOLGA6L7A0A1B0GV03 622 aa13.13□□□□□ -0.31
PDCD11-201ENST00000369797 CCDC194A0A1B0GVG4 234 aa13.13□□□□□ -0.31
PDCD11-201ENST00000369797 TNNT1P13805 278 aa13.13□□□□□ -0.31
PDCD11-201ENST00000369797 SPA17Q15506 151 aa13.13□□□□□ -0.31
PDCD11-201ENST00000369797 FKBP15Q5T1M5 1219 aa13.13□□□□□ -0.31
PDCD11-201ENST00000369797 CTNNBL1Q8WYA6 563 aaPredicted RBP13.13□□□□□ -0.31
PDCD11-201ENST00000369797 CCDC102AQ96A19 550 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms