RNA–Protein interactions for RNA: ENST00000369682.4

PLXNA3-201, Transcript of plexin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLXNA3, Length 10,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-201ENST00000369682 CCDC181Q5TID7 509 aa13.57□□□□□ -0.24
PLXNA3-201ENST00000369682 AMOTL1Q8IY63 956 aa13.57□□□□□ -0.24
PLXNA3-201ENST00000369682 KRT18P05783 430 aaKnown RBP13.57□□□□□ -0.24
PLXNA3-201ENST00000369682 JARID2Q92833 1246 aaPredicted RBP13.56□□□□□ -0.24
PLXNA3-201ENST00000369682 MX1P20591 662 aa13.56□□□□□ -0.24
PLXNA3-201ENST00000369682 DUSP27Q5VZP5 1158 aa13.56□□□□□ -0.24
PLXNA3-201ENST00000369682 CCDC82Q8N4S0 544 aa13.56□□□□□ -0.24
PLXNA3-201ENST00000369682 GOLGA6L10A6NI86 522 aa13.56□□□□□ -0.24
PLXNA3-201ENST00000369682 IKQ13123 557 aaPredicted RBP13.56□□□□□ -0.24
PLXNA3-201ENST00000369682 CCDC144CPQ8IYA2 1237 aa13.56□□□□□ -0.24
PLXNA3-201ENST00000369682 DHX8Q14562 1220 aaKnown RBP13.56□□□□□ -0.24
PLXNA3-201ENST00000369682 LRPPRCP42704 1394 aaKnown RBP13.56□□□□□ -0.24
PLXNA3-201ENST00000369682 CCT4P50991 539 aaKnown RBP13.56□□□□□ -0.24
PLXNA3-201ENST00000369682 NCOA1Q15788 1441 aa13.56□□□□□ -0.24
PLXNA3-201ENST00000369682 C8orf34Q49A92 452 aa13.55□□□□□ -0.24
PLXNA3-201ENST00000369682 TTC12Q9H892 705 aaPredicted RBP13.55□□□□□ -0.24
PLXNA3-201ENST00000369682 SFPQP23246 707 aaKnown RBP eCLIP13.55□□□□□ -0.24
PLXNA3-201ENST00000369682 NECAB1Q8N987 351 aa13.55□□□□□ -0.24
PLXNA3-201ENST00000369682 BOLA2Q9H3K6 86 aa13.55□□□□□ -0.24
PLXNA3-201ENST00000369682 THOC2Q8NI27 1593 aaKnown RBP13.55□□□□□ -0.24
PLXNA3-201ENST00000369682 IFT140Q96RY7 1462 aa13.55□□□□□ -0.24
PLXNA3-201ENST00000369682 FAM69CQ0P6D2 419 aa13.55□□□□□ -0.24
PLXNA3-201ENST00000369682 TCEANC2Q96MN5 208 aa13.55□□□□□ -0.24
PLXNA3-201ENST00000369682 ZNHIT6Q9NWK9 470 aaKnown RBP13.55□□□□□ -0.24
PLXNA3-201ENST00000369682 CDR1P51861 262 aa13.55□□□□□ -0.24
PLXNA3-201ENST00000369682 TMCO3Q6UWJ1 677 aa13.55□□□□□ -0.24
PLXNA3-201ENST00000369682 LRRC2Q9BYS8 371 aa13.54□□□□□ -0.24
PLXNA3-201ENST00000369682 ATP2C2O75185 946 aa13.54□□□□□ -0.24
PLXNA3-201ENST00000369682 ZNF530Q6P9A1 599 aaPredicted RBP13.54□□□□□ -0.24
PLXNA3-201ENST00000369682 LMAN1P49257 510 aa13.54□□□□□ -0.24
PLXNA3-201ENST00000369682 FSIP1Q8NA03 581 aa13.54□□□□□ -0.24
PLXNA3-201ENST00000369682 CTDP1Q9Y5B0 961 aaPredicted RBP13.54□□□□□ -0.24
PLXNA3-201ENST00000369682 PLEKHH2Q8IVE3 1493 aa13.54□□□□□ -0.24
PLXNA3-201ENST00000369682 PCDHB15Q9Y5E8 787 aa13.54□□□□□ -0.24
PLXNA3-201ENST00000369682 MAPKBP1O60336 1514 aa13.54□□□□□ -0.24
PLXNA3-201ENST00000369682 PPARDQ03181 441 aa13.54□□□□□ -0.24
PLXNA3-201ENST00000369682 MAP3K1Q13233 1512 aa13.53□□□□□ -0.24
PLXNA3-201ENST00000369682 CCDC69A6NI79 296 aa13.53□□□□□ -0.24
PLXNA3-201ENST00000369682 EPB41L2O43491 1005 aaKnown RBP13.53□□□□□ -0.24
PLXNA3-201ENST00000369682 CEP135Q66GS9 1140 aa13.53□□□□□ -0.24
PLXNA3-201ENST00000369682 CNNM1Q9NRU3 951 aa13.53□□□□□ -0.24
PLXNA3-201ENST00000369682 ANKRD62A6NC57 917 aa13.53□□□□□ -0.24
PLXNA3-201ENST00000369682 ARHGAP29Q52LW3 1261 aa13.53□□□□□ -0.24
PLXNA3-201ENST00000369682 BCCIPQ9P287 314 aaKnown RBP eCLIP13.53□□□□□ -0.24
PLXNA3-201ENST00000369682 ERLIN1O75477 346 aa13.53□□□□□ -0.24
PLXNA3-201ENST00000369682 PRIM1P49642 420 aaKnown RBP13.53□□□□□ -0.24
PLXNA3-201ENST00000369682 EIF3JO75822 258 aaKnown RBP13.53□□□□□ -0.24
PLXNA3-201ENST00000369682 SRCIN1Q9C0H9 1055 aa13.53□□□□□ -0.24
PLXNA3-201ENST00000369682 BICRAQ9NZM4 1560 aa13.53□□□□□ -0.24
PLXNA3-201ENST00000369682 BBXQ8WY36 941 aaPredicted RBP13.53□□□□□ -0.24
PLXNA3-201ENST00000369682 GJB2P29033 226 aa13.53□□□□□ -0.24
PLXNA3-201ENST00000369682 SART3Q15020 963 aaKnown RBP13.53□□□□□ -0.24
PLXNA3-201ENST00000369682 KIF18AQ8NI77 898 aa13.53□□□□□ -0.24
PLXNA3-201ENST00000369682 FAM83GA6ND36 823 aa13.52□□□□□ -0.24
PLXNA3-201ENST00000369682 VGLL3A8MV65 326 aa13.52□□□□□ -0.24
PLXNA3-201ENST00000369682 NEFHP12036 1026 aa13.52□□□□□ -0.24
PLXNA3-201ENST00000369682 TBC1D2BQ9UPU7 963 aa13.52□□□□□ -0.24
PLXNA3-201ENST00000369682 RAPGEF4Q8WZA2 1011 aa13.52□□□□□ -0.25
PLXNA3-201ENST00000369682 CBFA2T2O43439 604 aa13.52□□□□□ -0.25
PLXNA3-201ENST00000369682 CCDC113Q9H0I3 377 aa13.51□□□□□ -0.25
PLXNA3-201ENST00000369682 STRN4Q9NRL3 753 aa13.51□□□□□ -0.25
PLXNA3-201ENST00000369682 TSC1Q92574 1164 aa13.51□□□□□ -0.25
PLXNA3-201ENST00000369682 HIP1O00291 1037 aa13.51□□□□□ -0.25
PLXNA3-201ENST00000369682 SLC4A8Q2Y0W8 1093 aa13.51□□□□□ -0.25
PLXNA3-201ENST00000369682 MATR3P43243 847 aaKnown RBP eCLIP13.51□□□□□ -0.25
PLXNA3-201ENST00000369682 CCDC141Q6ZP82 1450 aa13.51□□□□□ -0.25
PLXNA3-201ENST00000369682 OSCARQ8IYS5 282 aa13.51□□□□□ -0.25
PLXNA3-201ENST00000369682 RBM33Q96EV2 1170 aaKnown RBP13.51□□□□□ -0.25
PLXNA3-201ENST00000369682 CCDC8Q9H0W5 538 aaPredicted RBP13.5□□□□□ -0.25
PLXNA3-201ENST00000369682 DYNC1I1O14576 645 aa13.5□□□□□ -0.25
PLXNA3-201ENST00000369682 XBP1P17861 261 aa13.5□□□□□ -0.25
PLXNA3-201ENST00000369682 JAKMIP3Q5VZ66 844 aa13.5□□□□□ -0.25
PLXNA3-201ENST00000369682 PPP6R1Q9UPN7 881 aa13.5□□□□□ -0.25
PLXNA3-201ENST00000369682 TXLNAP40222 546 aa13.5□□□□□ -0.25
PLXNA3-201ENST00000369682 EIF5P55010 431 aaKnown RBP13.5□□□□□ -0.25
PLXNA3-201ENST00000369682 ERC1Q8IUD2 1116 aa13.5□□□□□ -0.25
PLXNA3-201ENST00000369682 ABCA10Q8WWZ4 1543 aa13.5□□□□□ -0.25
PLXNA3-201ENST00000369682 USP48Q86UV5 1035 aa13.5□□□□□ -0.25
PLXNA3-201ENST00000369682 GAS2L2Q8NHY3 880 aa13.5□□□□□ -0.25
PLXNA3-201ENST00000369682 ANKRD1Q15327 319 aa13.49□□□□□ -0.25
PLXNA3-201ENST00000369682 NFE2L2Q16236 605 aa13.49□□□□□ -0.25
PLXNA3-201ENST00000369682 JMYQ8N9B5 988 aa13.49□□□□□ -0.25
PLXNA3-201ENST00000369682 HAND2P61296 217 aa13.49□□□□□ -0.25
PLXNA3-201ENST00000369682 ZNF526Q8TF50 670 aaPredicted RBP13.49□□□□□ -0.25
PLXNA3-201ENST00000369682 ANKRD30BQ9BXX2 1392 aa13.49□□□□□ -0.25
PLXNA3-201ENST00000369682 TOP1P11387 765 aaKnown RBP13.49□□□□□ -0.25
PLXNA3-201ENST00000369682 SSR1P43307 286 aaKnown RBP13.49□□□□□ -0.25
PLXNA3-201ENST00000369682 ZGPATQ8N5A5 531 aaKnown RBP13.49□□□□□ -0.25
PLXNA3-201ENST00000369682 TDO2P48775 406 aa13.49□□□□□ -0.25
PLXNA3-201ENST00000369682 CCAR1Q8IX12 1150 aaKnown RBP13.49□□□□□ -0.25
PLXNA3-201ENST00000369682 MAGI1Q96QZ7 1491 aaPredicted RBP13.48□□□□□ -0.25
PLXNA3-201ENST00000369682 SNW1Q13573 536 aaKnown RBP13.48□□□□□ -0.25
PLXNA3-201ENST00000369682 GOPCQ9HD26 462 aa13.48□□□□□ -0.25
PLXNA3-201ENST00000369682 GIMAP7Q8NHV1 300 aa13.48□□□□□ -0.25
PLXNA3-201ENST00000369682 GTF3C6Q969F1 213 aa13.48□□□□□ -0.25
PLXNA3-201ENST00000369682 C16orf71Q8IYS4 520 aaPredicted RBP13.48□□□□□ -0.25
PLXNA3-201ENST00000369682 ANO6Q4KMQ2 910 aa13.48□□□□□ -0.25
PLXNA3-201ENST00000369682 STX6O43752 255 aa13.48□□□□□ -0.25
PLXNA3-201ENST00000369682 KIF4BQ2VIQ3 1234 aa13.48□□□□□ -0.25
PLXNA3-201ENST00000369682 ZSCAN31Q96LW9 406 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms