RNA–Protein interactions for RNA: ENST00000369220.8

CCNC-203, Transcript of cyclin C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCNC, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-203ENST00000369220 CABP4P57796 275 aa13.64□□□□□ -0.23
CCNC-203ENST00000369220 PROM2Q8N271 834 aa13.64□□□□□ -0.23
CCNC-203ENST00000369220 PNNQ9H307 717 aaKnown RBP13.64□□□□□ -0.23
CCNC-203ENST00000369220 CEMIPQ8WUJ3 1361 aa13.64□□□□□ -0.23
CCNC-203ENST00000369220 ERVV-2B6SEH9 535 aa13.63□□□□□ -0.23
CCNC-203ENST00000369220 BAG6P46379 1132 aa13.63□□□□□ -0.23
CCNC-203ENST00000369220 SLC52A2Q9HAB3 445 aa13.63□□□□□ -0.23
CCNC-203ENST00000369220 CAMKK2Q96RR4 588 aa13.63□□□□□ -0.23
CCNC-203ENST00000369220 MRC1P22897 1456 aa13.62□□□□□ -0.23
CCNC-203ENST00000369220 RTF1Q92541 710 aaKnown RBP13.62□□□□□ -0.23
CCNC-203ENST00000369220 PALLDQ8WX93 1383 aa13.61□□□□□ -0.23
CCNC-203ENST00000369220 SLC39A6Q13433 755 aa13.61□□□□□ -0.23
CCNC-203ENST00000369220 ATG3Q9NT62 314 aa13.61□□□□□ -0.23
CCNC-203ENST00000369220 TRIM35Q9UPQ4 493 aa13.61□□□□□ -0.23
CCNC-203ENST00000369220 PLSCR1O15162 318 aa13.61□□□□□ -0.23
CCNC-203ENST00000369220 LRRC4BQ9NT99 713 aa13.61□□□□□ -0.23
CCNC-203ENST00000369220 SALL2Q9Y467 1007 aaPredicted RBP13.61□□□□□ -0.23
CCNC-203ENST00000369220 TEFQ10587 303 aa13.6□□□□□ -0.23
CCNC-203ENST00000369220 TXNRD1Q16881 649 aa13.6□□□□□ -0.23
CCNC-203ENST00000369220 PTCD1O75127 700 aaKnown RBP13.59□□□□□ -0.23
CCNC-203ENST00000369220 MIS18AQ9NYP9 233 aa13.59□□□□□ -0.23
CCNC-203ENST00000369220 SLC4A9Q96Q91 983 aa13.58□□□□□ -0.23
CCNC-203ENST00000369220 KCNQ3O43525 872 aa13.58□□□□□ -0.24
CCNC-203ENST00000369220 HTATSF1O43719 755 aaKnown RBP13.58□□□□□ -0.24
CCNC-203ENST00000369220 SIPA1L3O60292 1781 aaPredicted RBP13.58□□□□□ -0.24
CCNC-203ENST00000369220 LOC102724428A0A0B4J2F2 783 aa13.57□□□□□ -0.24
CCNC-203ENST00000369220 LY75O60449 1722 aa13.57□□□□□ -0.24
CCNC-203ENST00000369220 SIK1P57059 783 aa13.57□□□□□ -0.24
CCNC-203ENST00000369220 ANO8Q9HCE9 1232 aaPredicted RBP13.57□□□□□ -0.24
CCNC-203ENST00000369220 RGPD3A6NKT7 1758 aaPredicted RBP13.56□□□□□ -0.24
CCNC-203ENST00000369220 RGPD4Q7Z3J3 1758 aa13.56□□□□□ -0.24
CCNC-203ENST00000369220 BTBD11A6QL63 1104 aa13.56□□□□□ -0.24
CCNC-203ENST00000369220 RBM42Q9BTD8 480 aaKnown RBP13.56□□□□□ -0.24
CCNC-203ENST00000369220 CCNL1Q9UK58 526 aaPredicted RBP13.56□□□□□ -0.24
CCNC-203ENST00000369220 RREB1Q92766 1687 aa13.56□□□□□ -0.24
CCNC-203ENST00000369220 ZNF790Q6PG37 636 aa13.55□□□□□ -0.24
CCNC-203ENST00000369220 PAPPAQ13219 1627 aa13.55□□□□□ -0.24
CCNC-203ENST00000369220 KCPQ6ZWJ8 1503 aa13.55□□□□□ -0.24
CCNC-203ENST00000369220 NUP188Q5SRE5 1749 aa13.55□□□□□ -0.24
CCNC-203ENST00000369220 ITPK1Q13572 414 aa13.55□□□□□ -0.24
CCNC-203ENST00000369220 LMOD3Q0VAK6 560 aa13.54□□□□□ -0.24
CCNC-203ENST00000369220 ZNF496Q96IT1 587 aaPredicted RBP13.54□□□□□ -0.24
CCNC-203ENST00000369220 TAF7Q15545 349 aaPredicted RBP13.54□□□□□ -0.24
CCNC-203ENST00000369220 WWC1Q8IX03 1113 aa13.54□□□□□ -0.24
CCNC-203ENST00000369220 SMARCC1Q92922 1105 aaPredicted RBP13.54□□□□□ -0.24
CCNC-203ENST00000369220 ATP6V1AP38606 617 aa13.53□□□□□ -0.24
CCNC-203ENST00000369220 LAS1LQ9Y4W2 734 aaKnown RBP13.53□□□□□ -0.24
CCNC-203ENST00000369220 PRAMEF22A3QJZ6 481 aa13.52□□□□□ -0.24
CCNC-203ENST00000369220 ZNF827Q17R98 1081 aa13.52□□□□□ -0.24
CCNC-203ENST00000369220 SLC27A3Q5K4L6 730 aa13.52□□□□□ -0.24
CCNC-203ENST00000369220 SMIM5Q71RC9 77 aa13.52□□□□□ -0.24
CCNC-203ENST00000369220 TTC5Q8N0Z6 440 aa13.52□□□□□ -0.24
CCNC-203ENST00000369220 UBR2Q8IWV8 1755 aa13.52□□□□□ -0.25
CCNC-203ENST00000369220 AMIGO3Q86WK7 504 aa13.52□□□□□ -0.25
CCNC-203ENST00000369220 LINC00116Q8NCU8 138 aa13.52□□□□□ -0.25
CCNC-203ENST00000369220 PSDA5PKW4 1024 aaPredicted RBP13.51□□□□□ -0.25
CCNC-203ENST00000369220 KRT24Q2M2I5 525 aa13.51□□□□□ -0.25
CCNC-203ENST00000369220 PDGFDQ9GZP0 370 aaPredicted RBP13.51□□□□□ -0.25
CCNC-203ENST00000369220 TSPYL4Q9UJ04 414 aa13.51□□□□□ -0.25
CCNC-203ENST00000369220 C5P01031 1676 aa13.5□□□□□ -0.25
CCNC-203ENST00000369220 CCDC27Q2M243 656 aa13.5□□□□□ -0.25
CCNC-203ENST00000369220 DNAJC10Q8IXB1 793 aa13.5□□□□□ -0.25
CCNC-203ENST00000369220 KDM3BQ7LBC6 1761 aa13.49□□□□□ -0.25
CCNC-203ENST00000369220 R3HDM1Q15032 1099 aaKnown RBP13.49□□□□□ -0.25
CCNC-203ENST00000369220 SPINK5Q9NQ38 1064 aaPredicted RBP13.49□□□□□ -0.25
CCNC-203ENST00000369220 TAF1LQ8IZX4 1826 aa13.49□□□□□ -0.25
CCNC-203ENST00000369220 TJP1Q07157 1748 aa13.49□□□□□ -0.25
CCNC-203ENST00000369220 CHL1O00533 1208 aa13.49□□□□□ -0.25
CCNC-203ENST00000369220 TSR2Q969E8 191 aaKnown RBP13.49□□□□□ -0.25
CCNC-203ENST00000369220 HEG1Q9ULI3 1381 aa13.49□□□□□ -0.25
CCNC-203ENST00000369220 AKT1S1Q96B36 256 aa13.48□□□□□ -0.25
CCNC-203ENST00000369220 CFAP44Q96MT7 982 aa13.48□□□□□ -0.25
CCNC-203ENST00000369220 FMNL2Q96PY5 1086 aa13.48□□□□□ -0.25
CCNC-203ENST00000369220 MBIPQ9NS73 344 aa13.48□□□□□ -0.25
CCNC-203ENST00000369220 C4BP0C0L5 1744 aa13.48□□□□□ -0.25
CCNC-203ENST00000369220 ZNF853P0CG23 659 aa13.48□□□□□ -0.25
CCNC-203ENST00000369220 EIF4A1P60842 406 aaKnown RBP13.48□□□□□ -0.25
CCNC-203ENST00000369220 MYH14Q7Z406 1995 aaKnown RBP13.48□□□□□ -0.25
CCNC-203ENST00000369220 ZNF521Q96K83 1311 aa13.48□□□□□ -0.25
CCNC-203ENST00000369220 SLC15A2Q16348 729 aa13.47□□□□□ -0.25
CCNC-203ENST00000369220 COL5A3P25940 1745 aaPredicted RBP13.47□□□□□ -0.25
CCNC-203ENST00000369220 PIP4K2AP48426 406 aaPredicted RBP13.46□□□□□ -0.25
CCNC-203ENST00000369220 IFT57Q9NWB7 429 aa13.46□□□□□ -0.25
CCNC-203ENST00000369220 USP16Q9Y5T5 823 aa13.46□□□□□ -0.25
CCNC-203ENST00000369220 CYP19A1P11511 503 aaPredicted RBP13.46□□□□□ -0.26
CCNC-203ENST00000369220 CRKLP46109 303 aaKnown RBP13.46□□□□□ -0.26
CCNC-203ENST00000369220 HNRNPUQ00839 825 aaKnown RBP eCLIP13.46□□□□□ -0.26
CCNC-203ENST00000369220 TFCP2L1Q9NZI6 479 aa13.46□□□□□ -0.26
CCNC-203ENST00000369220 ZNF831Q5JPB2 1677 aa13.45□□□□□ -0.26
CCNC-203ENST00000369220 GNPATO15228 680 aa13.45□□□□□ -0.26
CCNC-203ENST00000369220 GIGYF1O75420 1035 aaPredicted RBP13.45□□□□□ -0.26
CCNC-203ENST00000369220 PHF14O94880 888 aa13.45□□□□□ -0.26
CCNC-203ENST00000369220 NBPF14Q5TI25 921 aa13.45□□□□□ -0.26
CCNC-203ENST00000369220 VSIG10Q8N0Z9 540 aa13.45□□□□□ -0.26
CCNC-203ENST00000369220 TUBGCP6Q96RT7 1819 aa13.45□□□□□ -0.26
CCNC-203ENST00000369220 INTS5Q6P9B9 1019 aaKnown RBP13.45□□□□□ -0.26
CCNC-203ENST00000369220 AK7Q96M32 723 aa13.45□□□□□ -0.26
CCNC-203ENST00000369220 STK32BQ9NY57 414 aa13.45□□□□□ -0.26
CCNC-203ENST00000369220 ZBTB1Q9Y2K1 713 aa13.45□□□□□ -0.26
CCNC-203ENST00000369220 PNPLA7Q6ZV29 1317 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms