RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 FLIIQ13045 1269 aa12.62□□□□□ -0.39
TPM3-209ENST00000368527 PLEKHO1Q53GL0 409 aaPredicted RBP12.62□□□□□ -0.39
TPM3-209ENST00000368527 GBP4Q96PP9 640 aa12.62□□□□□ -0.39
TPM3-209ENST00000368527 SLIT3O75094 1523 aa12.62□□□□□ -0.39
TPM3-209ENST00000368527 KIF1AQ12756 1690 aa12.61□□□□□ -0.39
TPM3-209ENST00000368527 SKOR2Q2VWA4 1001 aaPredicted RBP12.61□□□□□ -0.39
TPM3-209ENST00000368527 K7ELQ4 463 aaPredicted RBP12.6□□□□□ -0.39
TPM3-209ENST00000368527 FOXO3O43524 673 aa12.6□□□□□ -0.39
TPM3-209ENST00000368527 RAB11FIP3O75154 756 aa12.6□□□□□ -0.39
TPM3-209ENST00000368527 MCM4P33991 863 aa12.6□□□□□ -0.39
TPM3-209ENST00000368527 ATP8B2P98198 1209 aa12.6□□□□□ -0.39
TPM3-209ENST00000368527 AKAP4Q5JQC9 854 aa12.6□□□□□ -0.39
TPM3-209ENST00000368527 MEIS3Q99687 375 aa12.6□□□□□ -0.39
TPM3-209ENST00000368527 IBTKQ9P2D0 1353 aaPredicted RBP12.59□□□□□ -0.39
TPM3-209ENST00000368527 DDIT3P35638 169 aa12.59□□□□□ -0.39
TPM3-209ENST00000368527 FKBP5Q13451 457 aaPredicted RBP12.59□□□□□ -0.39
TPM3-209ENST00000368527 KRT24Q2M2I5 525 aa12.59□□□□□ -0.39
TPM3-209ENST00000368527 HSP90AB4PQ58FF6 505 aa12.59□□□□□ -0.39
TPM3-209ENST00000368527 IL17REQ8NFR9 667 aa12.59□□□□□ -0.39
TPM3-209ENST00000368527 LTN1O94822 1766 aa12.58□□□□□ -0.39
TPM3-209ENST00000368527 ABCC6O95255 1503 aa12.58□□□□□ -0.4
TPM3-209ENST00000368527 LMO7Q8WWI1 1683 aa12.58□□□□□ -0.4
TPM3-209ENST00000368527 HSP90AA1P07900 732 aaKnown RBP12.58□□□□□ -0.4
TPM3-209ENST00000368527 GSPT1P15170 499 aaKnown RBP12.58□□□□□ -0.4
TPM3-209ENST00000368527 SLC4A10Q6U841 1118 aa12.58□□□□□ -0.4
TPM3-209ENST00000368527 ILDR1Q86SU0 546 aaPredicted RBP12.58□□□□□ -0.4
TPM3-209ENST00000368527 C14orf37Q86TY3 774 aa12.58□□□□□ -0.4
TPM3-209ENST00000368527 LRRCC1Q9C099 1032 aa12.58□□□□□ -0.4
TPM3-209ENST00000368527 ERC2O15083 957 aa12.57□□□□□ -0.4
TPM3-209ENST00000368527 ST18O60284 1047 aa12.57□□□□□ -0.4
TPM3-209ENST00000368527 MCCP23508 829 aa12.57□□□□□ -0.4
TPM3-209ENST00000368527 MCM2P49736 904 aa12.57□□□□□ -0.4
TPM3-209ENST00000368527 TEFQ10587 303 aa12.57□□□□□ -0.4
TPM3-209ENST00000368527 ESCO1Q5FWF5 840 aa12.57□□□□□ -0.4
TPM3-209ENST00000368527 HDGFL1Q5TGJ6 251 aa12.57□□□□□ -0.4
TPM3-209ENST00000368527 CWC22Q9HCG8 908 aaKnown RBP12.57□□□□□ -0.4
TPM3-209ENST00000368527 STAP2Q9UGK3 403 aa12.57□□□□□ -0.4
TPM3-209ENST00000368527 DCCP43146 1447 aa12.56□□□□□ -0.4
TPM3-209ENST00000368527 GOLGA6L22H0YM25 854 aa12.56□□□□□ -0.4
TPM3-209ENST00000368527 UBTFL1P0CB47 393 aaPredicted RBP12.56□□□□□ -0.4
TPM3-209ENST00000368527 SDSP20132 328 aa12.56□□□□□ -0.4
TPM3-209ENST00000368527 C1orf141Q5JVX7 400 aa12.56□□□□□ -0.4
TPM3-209ENST00000368527 ARHGEF25Q86VW2 580 aa12.56□□□□□ -0.4
TPM3-209ENST00000368527 KIF2CQ99661 725 aa12.56□□□□□ -0.4
TPM3-209ENST00000368527 USP26Q9BXU7 913 aa12.56□□□□□ -0.4
TPM3-209ENST00000368527 MIS18AQ9NYP9 233 aa12.56□□□□□ -0.4
TPM3-209ENST00000368527 CAMTA1Q9Y6Y1 1673 aa12.56□□□□□ -0.4
TPM3-209ENST00000368527 PDE1AP54750 535 aa12.55□□□□□ -0.4
TPM3-209ENST00000368527 ANAPC15P60006 121 aa12.55□□□□□ -0.4
TPM3-209ENST00000368527 EIF4A1P60842 406 aaKnown RBP12.55□□□□□ -0.4
TPM3-209ENST00000368527 NUCB2P80303 420 aa12.55□□□□□ -0.4
TPM3-209ENST00000368527 CLEC17AQ6ZS10 378 aa12.55□□□□□ -0.4
TPM3-209ENST00000368527 G2E3Q7L622 706 aa12.55□□□□□ -0.4
TPM3-209ENST00000368527 KDM3BQ7LBC6 1761 aa12.55□□□□□ -0.4
TPM3-209ENST00000368527 RAB3GAP1Q15042 981 aa12.54□□□□□ -0.4
TPM3-209ENST00000368527 SSH3Q8TE77 659 aa12.54□□□□□ -0.4
TPM3-209ENST00000368527 F6X3S4 739 aa12.53□□□□□ -0.4
TPM3-209ENST00000368527 ALDH1L1O75891 902 aa12.53□□□□□ -0.4
TPM3-209ENST00000368527 GCP02774 474 aa12.53□□□□□ -0.4
TPM3-209ENST00000368527 NUTM2GQ5VZR2 741 aa12.53□□□□□ -0.4
TPM3-209ENST00000368527 ZNF530Q6P9A1 599 aaPredicted RBP12.53□□□□□ -0.4
TPM3-209ENST00000368527 LTV1Q96GA3 475 aaPredicted RBP12.53□□□□□ -0.4
TPM3-209ENST00000368527 C19orf44Q9H6X5 657 aa12.53□□□□□ -0.4
TPM3-209ENST00000368527 DBF4Q9UBU7 674 aaPredicted RBP12.53□□□□□ -0.4
TPM3-209ENST00000368527 SALL3Q9BXA9 1300 aa12.53□□□□□ -0.4
TPM3-209ENST00000368527 MX1P20591 662 aa12.52□□□□□ -0.41
TPM3-209ENST00000368527 NBPF6Q5VWK0 638 aa12.52□□□□□ -0.41
TPM3-209ENST00000368527 IL17RAQ96F46 866 aa12.52□□□□□ -0.41
TPM3-209ENST00000368527 NBPF4Q96M43 638 aa12.52□□□□□ -0.41
TPM3-209ENST00000368527 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.52□□□□□ -0.419e-7■■■■□ 20.2
TPM3-209ENST00000368527 BTBD11A6QL63 1104 aa12.51□□□□□ -0.41
TPM3-209ENST00000368527 TRAK2O60296 914 aa12.51□□□□□ -0.41
TPM3-209ENST00000368527 DDX58O95786 925 aaKnown RBP12.51□□□□□ -0.41
TPM3-209ENST00000368527 POLA2Q14181 598 aa12.51□□□□□ -0.41
TPM3-209ENST00000368527 ERC1Q8IUD2 1116 aa12.51□□□□□ -0.41
TPM3-209ENST00000368527 DNAAF4Q8WXU2 420 aa12.51□□□□□ -0.41
TPM3-209ENST00000368527 KIF1BPQ96EK5 621 aa12.51□□□□□ -0.41
TPM3-209ENST00000368527 USP44Q9H0E7 712 aa12.51□□□□□ -0.41
TPM3-209ENST00000368527 HYPKQ9NX55 129 aa12.51□□□□□ -0.41
TPM3-209ENST00000368527 TRPM3Q9HCF6 1732 aaPredicted RBP12.51□□□□□ -0.41
TPM3-209ENST00000368527 GOLGA6L3A6NEY3 463 aa12.5□□□□□ -0.41
TPM3-209ENST00000368527 RNMTO43148 476 aaKnown RBP12.5□□□□□ -0.41
TPM3-209ENST00000368527 MTX1Q13505 466 aa12.5□□□□□ -0.41
TPM3-209ENST00000368527 KRT28Q7Z3Y7 464 aa12.5□□□□□ -0.41
TPM3-209ENST00000368527 C16orf71Q8IYS4 520 aaPredicted RBP12.5□□□□□ -0.41
TPM3-209ENST00000368527 ANKRD24Q8TF21 1146 aa12.5□□□□□ -0.41
TPM3-209ENST00000368527 HEG1Q9ULI3 1381 aa12.5□□□□□ -0.41
TPM3-209ENST00000368527 C1orf167Q5SNV9 1468 aa12.5□□□□□ -0.41
TPM3-209ENST00000368527 ADAMTS7Q9UKP4 1686 aa12.5□□□□□ -0.41
TPM3-209ENST00000368527 PROSER2Q86WR7 435 aaPredicted RBP12.49□□□□□ -0.41
TPM3-209ENST00000368527 POTEDQ86YR6 584 aa12.49□□□□□ -0.41
TPM3-209ENST00000368527 LRRFIP2Q9Y608 721 aaKnown RBP12.49□□□□□ -0.41
TPM3-209ENST00000368527 TTC41PQ6P2S7 1318 aa12.48□□□□□ -0.41
TPM3-209ENST00000368527 USP42Q9H9J4 1324 aaKnown RBP12.48□□□□□ -0.41
TPM3-209ENST00000368527 SMARCA5O60264 1052 aaPredicted RBP12.48□□□□□ -0.41
TPM3-209ENST00000368527 MRE11P49959 708 aa12.48□□□□□ -0.41
TPM3-209ENST00000368527 BEND3Q5T5X7 828 aa12.48□□□□□ -0.41
TPM3-209ENST00000368527 TNPO1Q92973 898 aaKnown RBP12.48□□□□□ -0.41
TPM3-209ENST00000368527 GPATCH3Q96I76 525 aa12.48□□□□□ -0.41
TPM3-209ENST00000368527 ESYT1Q9BSJ8 1104 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms