RNA–Protein interactions for RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 AKAP4Q5JQC9 854 aa33.53■■■□□ 2.96
EFNA1-202ENST00000368407 LMOD3Q0VAK6 560 aa33.52■■■□□ 2.96
EFNA1-202ENST00000368407 BECN1Q14457 450 aa33.52■■■□□ 2.96
EFNA1-202ENST00000368407 C1orf141Q5JVX7 400 aa33.52■■■□□ 2.96
EFNA1-202ENST00000368407 GLI3P10071 1580 aa33.51■■■□□ 2.96
EFNA1-202ENST00000368407 WNK3Q9BYP7 1800 aa33.51■■■□□ 2.96
EFNA1-202ENST00000368407 IGHDP01880 384 aa33.51■■■□□ 2.95
EFNA1-202ENST00000368407 PHKG2P15735 406 aa33.51■■■□□ 2.95
EFNA1-202ENST00000368407 CDCA7Q9BWT1 371 aaPredicted RBP33.51■■■□□ 2.95
EFNA1-202ENST00000368407 RTF1Q92541 710 aaKnown RBP33.5■■■□□ 2.95
EFNA1-202ENST00000368407 DDX54Q8TDD1 881 aaKnown RBP33.49■■■□□ 2.95
EFNA1-202ENST00000368407 PCDH11XQ9BZA7 1347 aa33.49■■■□□ 2.95
EFNA1-202ENST00000368407 PCDH11YQ9BZA8 1340 aa33.49■■■□□ 2.95
EFNA1-202ENST00000368407 ZNF772Q68DY9 489 aaPredicted RBP33.48■■■□□ 2.95
EFNA1-202ENST00000368407 MPRIPQ6WCQ1 1025 aa33.48■■■□□ 2.95
EFNA1-202ENST00000368407 IFNL2Q8IZJ0 200 aa33.48■■■□□ 2.95
EFNA1-202ENST00000368407 IL17REQ8NFR9 667 aa33.48■■■□□ 2.95
EFNA1-202ENST00000368407 WDR63Q8IWG1 891 aa33.47■■■□□ 2.95
EFNA1-202ENST00000368407 EXOC5O00471 708 aa33.47■■■□□ 2.95
EFNA1-202ENST00000368407 HTATSF1O43719 755 aaKnown RBP33.47■■■□□ 2.95
EFNA1-202ENST00000368407 LGR6Q9HBX8 967 aa33.47■■■□□ 2.95
EFNA1-202ENST00000368407 SHANK3Q9BYB0 1731 aa33.46■■■□□ 2.95
EFNA1-202ENST00000368407 FRAT2O75474 233 aaPredicted RBP33.45■■■□□ 2.95
EFNA1-202ENST00000368407 DDB1Q16531 1140 aa33.45■■■□□ 2.95
EFNA1-202ENST00000368407 RGS17Q9UGC6 210 aaPredicted RBP33.45■■■□□ 2.95
EFNA1-202ENST00000368407 TNS2Q63HR2 1409 aa33.45■■■□□ 2.94
EFNA1-202ENST00000368407 A0A0G2JS52 829 aa33.43■■■□□ 2.94
EFNA1-202ENST00000368407 BRPF3Q9ULD4 1205 aa33.42■■■□□ 2.94
EFNA1-202ENST00000368407 LRRC37A3O60309 1634 aa33.42■■■□□ 2.94
EFNA1-202ENST00000368407 RNMTO43148 476 aaKnown RBP33.41■■■□□ 2.94
EFNA1-202ENST00000368407 KDM6AO15550 1401 aaPredicted RBP33.41■■■□□ 2.94
EFNA1-202ENST00000368407 CEMIPQ8WUJ3 1361 aa33.4■■■□□ 2.94
EFNA1-202ENST00000368407 RARSP54136 660 aaKnown RBP33.4■■■□□ 2.94
EFNA1-202ENST00000368407 CANXP27824 592 aaKnown RBP33.39■■■□□ 2.94
EFNA1-202ENST00000368407 ONECUT3O60422 494 aaPredicted RBP33.38■■■□□ 2.93
EFNA1-202ENST00000368407 THSD7AQ9UPZ6 1657 aa33.38■■■□□ 2.93
EFNA1-202ENST00000368407 DCAF5Q96JK2 942 aa33.38■■■□□ 2.93
EFNA1-202ENST00000368407 IL16Q14005 1332 aa33.37■■■□□ 2.93
EFNA1-202ENST00000368407 HSP90AB1P08238 724 aaKnown RBP33.36■■■□□ 2.93
EFNA1-202ENST00000368407 CALD1Q05682 793 aaKnown RBP33.36■■■□□ 2.93
EFNA1-202ENST00000368407 NKX1-1Q15270 411 aaPredicted RBP33.36■■■□□ 2.93
EFNA1-202ENST00000368407 ANO8Q9HCE9 1232 aaPredicted RBP33.36■■■□□ 2.93
EFNA1-202ENST00000368407 CT47B1P0C2W7 299 aaPredicted RBP33.36■■■□□ 2.93
EFNA1-202ENST00000368407 MARCH10Q8NA82 808 aaPredicted RBP33.35■■■□□ 2.93
EFNA1-202ENST00000368407 COG6Q9Y2V7 657 aa33.35■■■□□ 2.93
EFNA1-202ENST00000368407 RBM6P78332 1123 aaKnown RBP33.34■■■□□ 2.93
EFNA1-202ENST00000368407 SEPT12Q8IYM1 358 aa33.34■■■□□ 2.93
EFNA1-202ENST00000368407 TSR2Q969E8 191 aaKnown RBP33.34■■■□□ 2.93
EFNA1-202ENST00000368407 UPF2Q9HAU5 1272 aaKnown RBP33.34■■■□□ 2.93
EFNA1-202ENST00000368407 ADAMTS7Q9UKP4 1686 aa33.34■■■□□ 2.93
EFNA1-202ENST00000368407 ZNF853P0CG23 659 aa33.33■■■□□ 2.93
EFNA1-202ENST00000368407 FAM43AQ8N2R8 423 aa33.33■■■□□ 2.93
EFNA1-202ENST00000368407 PANK1Q8TE04 598 aa33.33■■■□□ 2.93
EFNA1-202ENST00000368407 IFT57Q9NWB7 429 aa33.33■■■□□ 2.93
EFNA1-202ENST00000368407 POTEAQ6S8J7 498 aa33.32■■■□□ 2.92
EFNA1-202ENST00000368407 CFAP44Q96MT7 982 aa33.32■■■□□ 2.92
EFNA1-202ENST00000368407 RTN4Q9NQC3 1192 aaKnown RBP33.32■■■□□ 2.92
EFNA1-202ENST00000368407 MIS18AQ9NYP9 233 aa33.32■■■□□ 2.92
EFNA1-202ENST00000368407 TBC1D32Q96NH3 1257 aa33.32■■■□□ 2.92
EFNA1-202ENST00000368407 TEFQ10587 303 aa33.31■■■□□ 2.92
EFNA1-202ENST00000368407 GNAI1P63096 354 aa33.3■■■□□ 2.92
EFNA1-202ENST00000368407 RWDD1Q9H446 243 aaPredicted RBP33.3■■■□□ 2.92
EFNA1-202ENST00000368407 ANTXR1Q9H6X2 564 aa33.3■■■□□ 2.92
EFNA1-202ENST00000368407 SCN11AQ9UI33 1791 aa33.29■■■□□ 2.92
EFNA1-202ENST00000368407 MYH16Q9H6N6 1097 aa33.29■■■□□ 2.92
EFNA1-202ENST00000368407 MBIPQ9NS73 344 aa33.29■■■□□ 2.92
EFNA1-202ENST00000368407 TAF7Q15545 349 aaPredicted RBP33.28■■■□□ 2.92
EFNA1-202ENST00000368407 CHL1O00533 1208 aa33.28■■■□□ 2.92
EFNA1-202ENST00000368407 SLC52A2Q9HAB3 445 aa33.28■■■□□ 2.92
EFNA1-202ENST00000368407 RXRBP28702 533 aa33.27■■■□□ 2.92
EFNA1-202ENST00000368407 NFATC2IPQ8NCF5 419 aa33.26■■■□□ 2.92
EFNA1-202ENST00000368407 SEC24BO95487 1268 aa33.25■■■□□ 2.91
EFNA1-202ENST00000368407 L1TD1Q5T7N2 865 aaKnown RBP33.25■■■□□ 2.91
EFNA1-202ENST00000368407 TSPYL4Q9UJ04 414 aa33.24■■■□□ 2.91
EFNA1-202ENST00000368407 MRC1P22897 1456 aa33.24■■■□□ 2.91
EFNA1-202ENST00000368407 TOGARAM1Q9Y4F4 1720 aa33.24■■■□□ 2.91
EFNA1-202ENST00000368407 CABP4P57796 275 aa33.24■■■□□ 2.91
EFNA1-202ENST00000368407 FAM182BQ5T319 152 aa33.24■■■□□ 2.91
EFNA1-202ENST00000368407 ERVV-2B6SEH9 535 aa33.23■■■□□ 2.91
EFNA1-202ENST00000368407 PCDHB15Q9Y5E8 787 aa33.22■■■□□ 2.91
EFNA1-202ENST00000368407 BTBD11A6QL63 1104 aa33.21■■■□□ 2.91
EFNA1-202ENST00000368407 PDZRN3Q9UPQ7 1066 aa33.2■■■□□ 2.91
EFNA1-202ENST00000368407 SIPA1L3O60292 1781 aaPredicted RBP33.18■■■□□ 2.9
EFNA1-202ENST00000368407 KCNQ3O43525 872 aa33.18■■■□□ 2.9
EFNA1-202ENST00000368407 EXOSC9Q06265 439 aaKnown RBP33.18■■■□□ 2.9
EFNA1-202ENST00000368407 ACSBG1Q96GR2 724 aa33.18■■■□□ 2.9
EFNA1-202ENST00000368407 MVPQ14764 893 aaKnown RBP33.18■■■□□ 2.9
EFNA1-202ENST00000368407 BABAM1Q9NWV8 329 aa33.17■■■□□ 2.9
EFNA1-202ENST00000368407 RLBP1P12271 317 aa33.16■■■□□ 2.9
EFNA1-202ENST00000368407 PRIM1P49642 420 aaKnown RBP33.16■■■□□ 2.9
EFNA1-202ENST00000368407 SLC39A6Q13433 755 aa33.16■■■□□ 2.9
EFNA1-202ENST00000368407 SYTL4Q96C24 671 aaPredicted RBP33.16■■■□□ 2.9
EFNA1-202ENST00000368407 KRT24Q2M2I5 525 aa33.16■■■□□ 2.9
EFNA1-202ENST00000368407 TMOD3Q9NYL9 352 aa33.16■■■□□ 2.9
EFNA1-202ENST00000368407 RGS12O14924 1447 aa33.15■■■□□ 2.9
EFNA1-202ENST00000368407 KRT27Q7Z3Y8 459 aa33.14■■■□□ 2.9
EFNA1-202ENST00000368407 PIGBQ92521 554 aa33.14■■■□□ 2.9
EFNA1-202ENST00000368407 DOT1LQ8TEK3 1739 aa33.14■■■□□ 2.9
EFNA1-202ENST00000368407 BRWD3Q6RI45 1802 aa33.13■■■□□ 2.89
EFNA1-202ENST00000368407 ZKSCAN2Q63HK3 967 aa33.13■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms