RNA–Protein interactions for RNA: ENST00000368063.5

NCSTN-202, Transcript of nicastrin, humanhuman

TSL 1 (best) BASIC

Gene NCSTN, Length 3,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-202ENST00000368063 GTF3C6Q969F1 213 aa15.69■□□□□ 0.1
NCSTN-202ENST00000368063 TMX1Q9H3N1 280 aa15.69■□□□□ 0.1
NCSTN-202ENST00000368063 ATG3Q9NT62 314 aa15.69■□□□□ 0.1
NCSTN-202ENST00000368063 ZFYVE16Q7Z3T8 1539 aa15.68■□□□□ 0.1
NCSTN-202ENST00000368063 TRAPPC8Q9Y2L5 1435 aa15.68■□□□□ 0.1
NCSTN-202ENST00000368063 IL16Q14005 1332 aa15.68■□□□□ 0.1
NCSTN-202ENST00000368063 H2AFXP16104 143 aaPredicted RBP15.68■□□□□ 0.1
NCSTN-202ENST00000368063 CASQ1P31415 396 aa15.68■□□□□ 0.1
NCSTN-202ENST00000368063 KNDC1Q76NI1 1749 aa15.68■□□□□ 0.1
NCSTN-202ENST00000368063 MYO1CO00159 1063 aa15.68■□□□□ 0.1
NCSTN-202ENST00000368063 MYCNP04198 464 aaPredicted RBP15.68■□□□□ 0.1
NCSTN-202ENST00000368063 SDSP20132 328 aa15.68■□□□□ 0.1
NCSTN-202ENST00000368063 TPD52L1Q16890 204 aaPredicted RBP15.68■□□□□ 0.1
NCSTN-202ENST00000368063 TXLNBQ8N3L3 684 aa15.68■□□□□ 0.1
NCSTN-202ENST00000368063 SRCIN1Q9C0H9 1055 aa15.68■□□□□ 0.1
NCSTN-202ENST00000368063 CNPY2Q9Y2B0 182 aa15.68■□□□□ 0.1
NCSTN-202ENST00000368063 RTL1A6NKG5 1358 aa15.68■□□□□ 0.1
NCSTN-202ENST00000368063 RAD50Q92878 1312 aa15.68■□□□□ 0.1
NCSTN-202ENST00000368063 MTHFSP49914 203 aa15.68■□□□□ 0.1
NCSTN-202ENST00000368063 INO80Q9ULG1 1556 aaPredicted RBP15.67■□□□□ 0.1
NCSTN-202ENST00000368063 PTCH1Q13635 1447 aa15.67■□□□□ 0.1
NCSTN-202ENST00000368063 DEPDC5O75140 1603 aa15.67■□□□□ 0.1
NCSTN-202ENST00000368063 TRIM66O15016 1216 aa15.67■□□□□ 0.1
NCSTN-202ENST00000368063 PLA2G4AP47712 749 aa15.67■□□□□ 0.1
NCSTN-202ENST00000368063 GYS2P54840 703 aa15.67■□□□□ 0.1
NCSTN-202ENST00000368063 BRPF1P55201 1214 aaPredicted RBP15.67■□□□□ 0.1
NCSTN-202ENST00000368063 DHX37Q8IY37 1157 aaKnown RBP15.67■□□□□ 0.1
NCSTN-202ENST00000368063 OSCARQ8IYS5 282 aa15.67■□□□□ 0.1
NCSTN-202ENST00000368063 NCAPGQ9BPX3 1015 aa15.67■□□□□ 0.1
NCSTN-202ENST00000368063 NRBP1Q9UHY1 535 aa15.67■□□□□ 0.1
NCSTN-202ENST00000368063 LCMT1Q9UIC8 334 aa15.67■□□□□ 0.1
NCSTN-202ENST00000368063 KIAA1210Q9ULL0 1709 aa15.66■□□□□ 0.1
NCSTN-202ENST00000368063 AXDND1Q5T1B0 1012 aaPredicted RBP15.66■□□□□ 0.1
NCSTN-202ENST00000368063 CASC1Q6TDU7 716 aa15.66■□□□□ 0.1
NCSTN-202ENST00000368063 MYCBPQ99417 103 aaPredicted RBP15.66■□□□□ 0.1
NCSTN-202ENST00000368063 FANCAO15360 1455 aa15.66■□□□□ 0.1
NCSTN-202ENST00000368063 USP32Q8NFA0 1604 aa15.66■□□□□ 0.1
NCSTN-202ENST00000368063 ZNF592Q92610 1267 aa15.66■□□□□ 0.1
NCSTN-202ENST00000368063 KRBA2Q6ZNG9 492 aa15.65■□□□□ 0.1
NCSTN-202ENST00000368063 NYAP1Q6ZVC0 841 aa15.65■□□□□ 0.1
NCSTN-202ENST00000368063 C10orf67Q8IYJ2 551 aa15.65■□□□□ 0.1
NCSTN-202ENST00000368063 C16orf71Q8IYS4 520 aaPredicted RBP15.65■□□□□ 0.1
NCSTN-202ENST00000368063 CFAP53Q96M91 514 aa15.65■□□□□ 0.1
NCSTN-202ENST00000368063 BRMS1Q9HCU9 246 aa15.65■□□□□ 0.1
NCSTN-202ENST00000368063 ATAD2Q6PL18 1390 aa15.65■□□□□ 0.1
NCSTN-202ENST00000368063 ERC2O15083 957 aa15.65■□□□□ 0.1
NCSTN-202ENST00000368063 U2AF1L5P0DN76 240 aaPredicted RBP15.65■□□□□ 0.1
NCSTN-202ENST00000368063 U2AF1Q01081 240 aaKnown RBP eCLIP15.65■□□□□ 0.1
NCSTN-202ENST00000368063 RNF20Q5VTR2 975 aa15.65■□□□□ 0.1
NCSTN-202ENST00000368063 FAM200AQ8TCP9 573 aa15.65■□□□□ 0.1
NCSTN-202ENST00000368063 ASXL2Q76L83 1435 aa15.65■□□□□ 0.1
NCSTN-202ENST00000368063 PNMA6AP0CW24 399 aaPredicted RBP15.65■□□□□ 0.1
NCSTN-202ENST00000368063 GUCY2CP25092 1073 aa15.65■□□□□ 0.1
NCSTN-202ENST00000368063 PRR29P0C7W0 189 aa15.64■□□□□ 0.09
NCSTN-202ENST00000368063 TMPOP42166 694 aaKnown RBP15.64■□□□□ 0.09
NCSTN-202ENST00000368063 OTUD7AQ8TE49 926 aaPredicted RBP15.64■□□□□ 0.09
NCSTN-202ENST00000368063 CCDC171Q6TFL3 1326 aa15.64■□□□□ 0.09
NCSTN-202ENST00000368063 RGS12O14924 1447 aa15.64■□□□□ 0.09
NCSTN-202ENST00000368063 PLA2G4DQ86XP0 818 aa15.64■□□□□ 0.09
NCSTN-202ENST00000368063 PLEKHF1Q96S99 279 aa15.64■□□□□ 0.09
NCSTN-202ENST00000368063 ABCA6Q8N139 1617 aa15.64■□□□□ 0.09
NCSTN-202ENST00000368063 ATP7AQ04656 1500 aa15.64■□□□□ 0.09
NCSTN-202ENST00000368063 SLU7O95391 586 aaKnown RBP15.63■□□□□ 0.09
NCSTN-202ENST00000368063 CACTINQ8WUQ7 758 aaKnown RBP15.63■□□□□ 0.09
NCSTN-202ENST00000368063 DCTPP1Q9H773 170 aa15.63■□□□□ 0.09
NCSTN-202ENST00000368063 KCNG1Q9UIX4 513 aa15.63■□□□□ 0.09
NCSTN-202ENST00000368063 PTPRTO14522 1441 aa15.63■□□□□ 0.09
NCSTN-202ENST00000368063 CCDC192P0DO97 292 aa15.63■□□□□ 0.09
NCSTN-202ENST00000368063 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.63■□□□□ 0.09
NCSTN-202ENST00000368063 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.63■□□□□ 0.09
NCSTN-202ENST00000368063 USP27XA6NNY8 438 aa15.62■□□□□ 0.09
NCSTN-202ENST00000368063 CLCN6P51797 869 aa15.62■□□□□ 0.09
NCSTN-202ENST00000368063 TEX35Q5T0J7 233 aa15.62■□□□□ 0.09
NCSTN-202ENST00000368063 AATKQ6ZMQ8 1374 aa15.62■□□□□ 0.09
NCSTN-202ENST00000368063 APPP05067 770 aa15.62■□□□□ 0.09
NCSTN-202ENST00000368063 TSGA10IPQ3SY00 556 aa15.62■□□□□ 0.09
NCSTN-202ENST00000368063 ZNF622Q969S3 477 aaKnown RBP eCLIP15.62■□□□□ 0.09
NCSTN-202ENST00000368063 SLC26A8Q96RN1 970 aa15.62■□□□□ 0.09
NCSTN-202ENST00000368063 ABCC4O15439 1325 aa15.62■□□□□ 0.09
NCSTN-202ENST00000368063 ZNF75DP51815 510 aa15.62■□□□□ 0.09
NCSTN-202ENST00000368063 TPRNQ4KMQ1 711 aa15.62■□□□□ 0.09
NCSTN-202ENST00000368063 SMARCE1Q969G3 411 aa15.62■□□□□ 0.09
NCSTN-202ENST00000368063 LRRFIP2Q9Y608 721 aaKnown RBP15.62■□□□□ 0.09
NCSTN-202ENST00000368063 NOL8Q76FK4 1167 aaKnown RBP15.61■□□□□ 0.09
NCSTN-202ENST00000368063 ARHGAP45Q92619 1136 aa15.61■□□□□ 0.09
NCSTN-202ENST00000368063 TET3O43151 1660 aa15.61■□□□□ 0.09
NCSTN-202ENST00000368063 ZRANB2O95218 330 aaKnown RBP eCLIP15.61■□□□□ 0.09
NCSTN-202ENST00000368063 ST5P78524 1137 aa15.61■□□□□ 0.09
NCSTN-202ENST00000368063 ZSCAN26Q16670 478 aa15.61■□□□□ 0.09
NCSTN-202ENST00000368063 SRLQ86TD4 932 aa15.61■□□□□ 0.09
NCSTN-202ENST00000368063 CCDC191Q8NCU4 936 aa15.61■□□□□ 0.09
NCSTN-202ENST00000368063 LUZP1Q86V48 1076 aa15.6■□□□□ 0.09
NCSTN-202ENST00000368063 UBXN6Q9BZV1 441 aa15.6■□□□□ 0.09
NCSTN-202ENST00000368063 MRVI1Q9Y6F6 885 aa15.6■□□□□ 0.09
NCSTN-202ENST00000368063 VWDEQ8N2E2 1590 aa15.6■□□□□ 0.09
NCSTN-202ENST00000368063 MYO3AQ8NEV4 1616 aa15.6■□□□□ 0.09
NCSTN-202ENST00000368063 HTATSF1O43719 755 aaKnown RBP15.6■□□□□ 0.09
NCSTN-202ENST00000368063 NPM1P06748 294 aaKnown RBP eCLIP15.6■□□□□ 0.09
NCSTN-202ENST00000368063 TPM4P67936 248 aa15.6■□□□□ 0.09
NCSTN-202ENST00000368063 PTPN14Q15678 1187 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms