RNA–Protein interactions for RNA: ENST00000367378.5

PCMT1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCMT1, Length 1,293 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-201ENST00000367378 KIAA1551Q9HCM1 1747 aa29.88■■■□□ 2.37
PCMT1-201ENST00000367378 KIF13BQ9NQT8 1826 aa29.87■■■□□ 2.37
PCMT1-201ENST00000367378 N4BP2Q86UW6 1770 aaPredicted RBP29.86■■■□□ 2.37
PCMT1-201ENST00000367378 CICQ96RK0 1608 aaPredicted RBP29.85■■■□□ 2.37
PCMT1-201ENST00000367378 MMP10P09238 476 aa29.85■■■□□ 2.37
PCMT1-201ENST00000367378 PXDNLA1KZ92 1463 aa29.83■■■□□ 2.37
PCMT1-201ENST00000367378 KDRP35968 1356 aa29.82■■■□□ 2.36
PCMT1-201ENST00000367378 KIF3CO14782 793 aa29.82■■■□□ 2.36
PCMT1-201ENST00000367378 EIF4A2Q14240 407 aaKnown RBP29.82■■■□□ 2.36
PCMT1-201ENST00000367378 SLC4A9Q96Q91 983 aa29.81■■■□□ 2.36
PCMT1-201ENST00000367378 ZNF831Q5JPB2 1677 aa29.8■■■□□ 2.36
PCMT1-201ENST00000367378 COL5A3P25940 1745 aaPredicted RBP29.79■■■□□ 2.36
PCMT1-201ENST00000367378 TNNT2P45379 298 aaPredicted RBP29.79■■■□□ 2.36
PCMT1-201ENST00000367378 TRAPPC3LQ5T215 181 aa29.78■■■□□ 2.36
PCMT1-201ENST00000367378 RTCBQ9Y3I0 505 aaKnown RBP29.77■■■□□ 2.36
PCMT1-201ENST00000367378 A0A0G2JLW4 131 aa29.76■■■□□ 2.35
PCMT1-201ENST00000367378 RBM42Q9BTD8 480 aaKnown RBP29.76■■■□□ 2.35
PCMT1-201ENST00000367378 TGFB2P61812 414 aa29.75■■■□□ 2.35
PCMT1-201ENST00000367378 C4AP0C0L4 1744 aa29.74■■■□□ 2.35
PCMT1-201ENST00000367378 MYH14Q7Z406 1995 aaKnown RBP29.74■■■□□ 2.35
PCMT1-201ENST00000367378 C10orf71Q711Q0 1435 aa29.74■■■□□ 2.35
PCMT1-201ENST00000367378 ERVV-2B6SEH9 535 aa29.74■■■□□ 2.35
PCMT1-201ENST00000367378 NLGN1Q8N2Q7 840 aa29.74■■■□□ 2.35
PCMT1-201ENST00000367378 ARHGEF1Q92888 912 aaKnown RBP29.74■■■□□ 2.35
PCMT1-201ENST00000367378 BRCA1P38398 1863 aaKnown RBP29.74■■■□□ 2.35
PCMT1-201ENST00000367378 BCS1LQ9Y276 419 aa29.73■■■□□ 2.35
PCMT1-201ENST00000367378 PLEKHG2Q9H7P9 1386 aa29.73■■■□□ 2.35
PCMT1-201ENST00000367378 RC3H1Q5TC82 1133 aaKnown RBP29.72■■■□□ 2.35
PCMT1-201ENST00000367378 GYS1P13807 737 aa29.71■■■□□ 2.35
PCMT1-201ENST00000367378 DCAF5Q96JK2 942 aa29.71■■■□□ 2.35
PCMT1-201ENST00000367378 POLR3GLQ9BT43 218 aa29.71■■■□□ 2.35
PCMT1-201ENST00000367378 KDM6AO15550 1401 aaPredicted RBP29.71■■■□□ 2.35
PCMT1-201ENST00000367378 ADRA2BP18089 450 aa29.7■■■□□ 2.35
PCMT1-201ENST00000367378 CNTNAP4Q9C0A0 1308 aa29.7■■■□□ 2.34
PCMT1-201ENST00000367378 DPEP1P16444 411 aa29.69■■■□□ 2.34
PCMT1-201ENST00000367378 RPS6KA4O75676 772 aa29.68■■■□□ 2.34
PCMT1-201ENST00000367378 ARHGAP27Q6ZUM4 889 aa29.68■■■□□ 2.34
PCMT1-201ENST00000367378 HSP90AB1P08238 724 aaKnown RBP29.67■■■□□ 2.34
PCMT1-201ENST00000367378 RFC4P35249 363 aa29.67■■■□□ 2.34
PCMT1-201ENST00000367378 PLEKHO1Q53GL0 409 aaPredicted RBP29.67■■■□□ 2.34
PCMT1-201ENST00000367378 CCDC87Q9NVE4 849 aa29.67■■■□□ 2.34
PCMT1-201ENST00000367378 ZNF530Q6P9A1 599 aaPredicted RBP29.66■■■□□ 2.34
PCMT1-201ENST00000367378 CABP4P57796 275 aa29.65■■■□□ 2.34
PCMT1-201ENST00000367378 ARFGEF1Q9Y6D6 1849 aa29.64■■■□□ 2.34
PCMT1-201ENST00000367378 FCHSD2O94868 740 aa29.64■■■□□ 2.34
PCMT1-201ENST00000367378 KCNA3P22001 575 aa29.64■■■□□ 2.34
PCMT1-201ENST00000367378 PARP3Q9Y6F1 533 aa29.64■■■□□ 2.34
PCMT1-201ENST00000367378 TOMM70O94826 608 aa29.63■■■□□ 2.33
PCMT1-201ENST00000367378 NMRK2Q9NPI5 230 aa29.62■■■□□ 2.33
PCMT1-201ENST00000367378 PTCD1O75127 700 aaKnown RBP29.61■■■□□ 2.33
PCMT1-201ENST00000367378 APLP1P51693 650 aa29.61■■■□□ 2.33
PCMT1-201ENST00000367378 TRIM26Q12899 539 aaPredicted RBP29.61■■■□□ 2.33
PCMT1-201ENST00000367378 AMOTQ4VCS5 1084 aa29.61■■■□□ 2.33
PCMT1-201ENST00000367378 AEBP1Q8IUX7 1158 aa29.61■■■□□ 2.33
PCMT1-201ENST00000367378 TIMELESSQ9UNS1 1208 aa29.61■■■□□ 2.33
PCMT1-201ENST00000367378 TJP1Q07157 1748 aa29.61■■■□□ 2.33
PCMT1-201ENST00000367378 SRP68Q9UHB9 627 aaKnown RBP29.6■■■□□ 2.33
PCMT1-201ENST00000367378 MTHFSP49914 203 aa29.59■■■□□ 2.33
PCMT1-201ENST00000367378 CRKLP46109 303 aaKnown RBP29.58■■■□□ 2.33
PCMT1-201ENST00000367378 DNAJC5GQ8N7S2 189 aa29.58■■■□□ 2.33
PCMT1-201ENST00000367378 NFATC2IPQ8NCF5 419 aa29.58■■■□□ 2.33
PCMT1-201ENST00000367378 PANK3Q9H999 370 aa29.58■■■□□ 2.33
PCMT1-201ENST00000367378 FKBP8Q14318 412 aa29.57■■■□□ 2.32
PCMT1-201ENST00000367378 C9orf131Q5VYM1 1079 aa29.57■■■□□ 2.32
PCMT1-201ENST00000367378 DDR1Q08345 913 aa29.56■■■□□ 2.32
PCMT1-201ENST00000367378 SCN11AQ9UI33 1791 aa29.56■■■□□ 2.32
PCMT1-201ENST00000367378 USP42Q9H9J4 1324 aaKnown RBP29.55■■■□□ 2.32
PCMT1-201ENST00000367378 C1orf141Q5JVX7 400 aa29.55■■■□□ 2.32
PCMT1-201ENST00000367378 PIM2Q9P1W9 311 aa29.55■■■□□ 2.32
PCMT1-201ENST00000367378 ADAMTS7Q9UKP4 1686 aa29.55■■■□□ 2.32
PCMT1-201ENST00000367378 WDR90Q96KV7 1748 aa29.52■■■□□ 2.32
PCMT1-201ENST00000367378 SULT6B1Q6IMI4 303 aa29.52■■■□□ 2.32
PCMT1-201ENST00000367378 SBF1O95248 1867 aa29.51■■■□□ 2.31
PCMT1-201ENST00000367378 INTS5Q6P9B9 1019 aaKnown RBP29.51■■■□□ 2.31
PCMT1-201ENST00000367378 CHRNA5P30532 468 aa29.5■■■□□ 2.31
PCMT1-201ENST00000367378 DALRD3Q5D0E6 543 aaKnown RBP29.5■■■□□ 2.31
PCMT1-201ENST00000367378 MORC1Q86VD1 984 aa29.5■■■□□ 2.31
PCMT1-201ENST00000367378 HSPA5P11021 654 aaKnown RBP29.49■■■□□ 2.31
PCMT1-201ENST00000367378 RBM46Q8TBY0 533 aaKnown RBP29.49■■■□□ 2.31
PCMT1-201ENST00000367378 KCPQ6ZWJ8 1503 aa29.49■■■□□ 2.31
PCMT1-201ENST00000367378 POLRMTO00411 1230 aaKnown RBP29.47■■■□□ 2.31
PCMT1-201ENST00000367378 TM4SF1P30408 202 aa29.47■■■□□ 2.31
PCMT1-201ENST00000367378 VIRMAQ69YN4 1812 aaKnown RBP29.46■■■□□ 2.31
PCMT1-201ENST00000367378 IL13P35225 146 aa29.46■■■□□ 2.31
PCMT1-201ENST00000367378 EIF4G2P78344 907 aaKnown RBP eCLIP29.46■■■□□ 2.31
PCMT1-201ENST00000367378 DNAJC10Q8IXB1 793 aa29.46■■■□□ 2.31
PCMT1-201ENST00000367378 RNF181Q9P0P0 153 aa29.46■■■□□ 2.31
PCMT1-201ENST00000367378 HTRA3P83110 453 aa29.45■■■□□ 2.31
PCMT1-201ENST00000367378 AFDNP55196 1824 aaKnown RBP29.45■■■□□ 2.3
PCMT1-201ENST00000367378 USPL1Q5W0Q7 1092 aa29.44■■■□□ 2.3
PCMT1-201ENST00000367378 C16orf71Q8IYS4 520 aaPredicted RBP29.44■■■□□ 2.3
PCMT1-201ENST00000367378 LGR6Q9HBX8 967 aa29.43■■■□□ 2.3
PCMT1-201ENST00000367378 AKAP4Q5JQC9 854 aa29.42■■■□□ 2.3
PCMT1-201ENST00000367378 SOS1Q07889 1333 aaPredicted RBP29.42■■■□□ 2.3
PCMT1-201ENST00000367378 KDM2BQ8NHM5 1336 aa29.42■■■□□ 2.3
PCMT1-201ENST00000367378 TNRC6CQ9HCJ0 1690 aaKnown RBP29.41■■■□□ 2.3
PCMT1-201ENST00000367378 ZPR1O75312 459 aa29.41■■■□□ 2.3
PCMT1-201ENST00000367378 SLC52A2Q9HAB3 445 aa29.41■■■□□ 2.3
PCMT1-201ENST00000367378 RRAGCQ9HB90 399 aa29.41■■■□□ 2.3
PCMT1-201ENST00000367378 CLSPNQ9HAW4 1339 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms