RNA–Protein interactions for RNA: ENST00000366999.8

NEK2-202, Transcript of NIMA related kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK2, Length 2,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-202ENST00000366999 PTPRCP08575 1304 aa21.08■□□□□ 0.97
NEK2-202ENST00000366999 F6X3S4 739 aa21.07■□□□□ 0.96
NEK2-202ENST00000366999 TEFQ10587 303 aa21.07■□□□□ 0.96
NEK2-202ENST00000366999 N4BP2Q86UW6 1770 aaPredicted RBP21.07■□□□□ 0.96
NEK2-202ENST00000366999 SIRT2Q8IXJ6 389 aa21.07■□□□□ 0.96
NEK2-202ENST00000366999 TATP17735 454 aaPredicted RBP21.06■□□□□ 0.96
NEK2-202ENST00000366999 SHANK3Q9BYB0 1731 aa21.06■□□□□ 0.96
NEK2-202ENST00000366999 BTBD11A6QL63 1104 aa21.05■□□□□ 0.96
NEK2-202ENST00000366999 C8orf34Q49A92 452 aa21.05■□□□□ 0.96
NEK2-202ENST00000366999 PARP4Q9UKK3 1724 aaKnown RBP21.05■□□□□ 0.96
NEK2-202ENST00000366999 PHKG2P15735 406 aa21.05■□□□□ 0.96
NEK2-202ENST00000366999 SMC5Q8IY18 1101 aa21.05■□□□□ 0.96
NEK2-202ENST00000366999 WDR17Q8IZU2 1322 aa21.04■□□□□ 0.96
NEK2-202ENST00000366999 CYP27B1O15528 508 aa21.04■□□□□ 0.96
NEK2-202ENST00000366999 CCDC30Q5VVM6 783 aa21.04■□□□□ 0.96
NEK2-202ENST00000366999 AHDC1Q5TGY3 1603 aaPredicted RBP21.04■□□□□ 0.96
NEK2-202ENST00000366999 C5P01031 1676 aa21.04■□□□□ 0.96
NEK2-202ENST00000366999 ATP10DQ9P241 1426 aa21.03■□□□□ 0.96
NEK2-202ENST00000366999 HEG1Q9ULI3 1381 aa21.03■□□□□ 0.96
NEK2-202ENST00000366999 MSH5O43196 834 aa21.02■□□□□ 0.96
NEK2-202ENST00000366999 FLIIQ13045 1269 aa21.02■□□□□ 0.96
NEK2-202ENST00000366999 HDGFL1Q5TGJ6 251 aa21.02■□□□□ 0.96
NEK2-202ENST00000366999 STK31Q9BXU1 1019 aa21.02■□□□□ 0.96
NEK2-202ENST00000366999 SOS1Q07889 1333 aaPredicted RBP21.02■□□□□ 0.96
NEK2-202ENST00000366999 PRAMEF22A3QJZ6 481 aa21.02■□□□□ 0.96
NEK2-202ENST00000366999 MEIS3Q99687 375 aa21.01■□□□□ 0.95
NEK2-202ENST00000366999 PHAXQ9H814 394 aaKnown RBP21.01■□□□□ 0.95
NEK2-202ENST00000366999 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.01■□□□□ 0.951e-6■■■■□ 25.6
NEK2-202ENST00000366999 COL16A1Q07092 1604 aaPredicted RBP21.01■□□□□ 0.95
NEK2-202ENST00000366999 MRC1P22897 1456 aa21.01■□□□□ 0.95
NEK2-202ENST00000366999 SPG7Q9UQ90 795 aa21.01■□□□□ 0.95
NEK2-202ENST00000366999 EIF2S2P20042 333 aaKnown RBP21■□□□□ 0.95
NEK2-202ENST00000366999 COL22A1Q8NFW1 1626 aaPredicted RBP21■□□□□ 0.95
NEK2-202ENST00000366999 LARP1Q6PKG0 1096 aaKnown RBP20.99■□□□□ 0.95
NEK2-202ENST00000366999 TOM1L2Q6ZVM7 507 aa20.99■□□□□ 0.95
NEK2-202ENST00000366999 ANXA1P04083 346 aa20.98■□□□□ 0.95
NEK2-202ENST00000366999 SLC39A6Q13433 755 aa20.98■□□□□ 0.95
NEK2-202ENST00000366999 FAM161AQ3B820 660 aa20.98■□□□□ 0.95
NEK2-202ENST00000366999 SLC4A10Q6U841 1118 aa20.98■□□□□ 0.95
NEK2-202ENST00000366999 CHPF2Q9P2E5 772 aa20.98■□□□□ 0.95
NEK2-202ENST00000366999 GLI3P10071 1580 aa20.98■□□□□ 0.95
NEK2-202ENST00000366999 IFNL2Q8IZJ0 200 aa20.98■□□□□ 0.95
NEK2-202ENST00000366999 SLC52A2Q9HAB3 445 aa20.98■□□□□ 0.95
NEK2-202ENST00000366999 PLEKHG2Q9H7P9 1386 aa20.97■□□□□ 0.95
NEK2-202ENST00000366999 FKBP5Q13451 457 aaPredicted RBP20.97■□□□□ 0.95
NEK2-202ENST00000366999 STRN4Q9NRL3 753 aa20.97■□□□□ 0.95
NEK2-202ENST00000366999 GIGYF1O75420 1035 aaPredicted RBP20.96■□□□□ 0.95
NEK2-202ENST00000366999 HOXB7P09629 217 aa20.96■□□□□ 0.95
NEK2-202ENST00000366999 NFATC2IPQ8NCF5 419 aa20.96■□□□□ 0.95
NEK2-202ENST00000366999 CHMP4BQ9H444 224 aaKnown RBP20.95■□□□□ 0.94
NEK2-202ENST00000366999 NUCB1Q02818 461 aa20.95■□□□□ 0.94
NEK2-202ENST00000366999 PROSER3Q2NL68 480 aa20.95■□□□□ 0.94
NEK2-202ENST00000366999 PHLPP1O60346 1717 aa20.94■□□□□ 0.94
NEK2-202ENST00000366999 CARD10Q9BWT7 1032 aa20.94■□□□□ 0.94
NEK2-202ENST00000366999 COL14A1Q05707 1796 aaKnown RBP20.94■□□□□ 0.94
NEK2-202ENST00000366999 CEP85Q6P2H3 762 aa20.93■□□□□ 0.94
NEK2-202ENST00000366999 PXDNLA1KZ92 1463 aa20.93■□□□□ 0.94
NEK2-202ENST00000366999 TOGARAM1Q9Y4F4 1720 aa20.93■□□□□ 0.94
NEK2-202ENST00000366999 CCT4P50991 539 aaKnown RBP20.93■□□□□ 0.94
NEK2-202ENST00000366999 NPM2Q86SE8 214 aaKnown RBP20.93■□□□□ 0.94
NEK2-202ENST00000366999 ZNF790Q6PG37 636 aa20.92■□□□□ 0.94
NEK2-202ENST00000366999 ANKRD44Q8N8A2 993 aa20.92■□□□□ 0.94
NEK2-202ENST00000366999 DCAF5Q96JK2 942 aa20.92■□□□□ 0.94
NEK2-202ENST00000366999 LNPKQ9C0E8 428 aa20.92■□□□□ 0.94
NEK2-202ENST00000366999 ZCRB1Q8TBF4 217 aaKnown RBP20.9■□□□□ 0.94
NEK2-202ENST00000366999 BTG4Q9NY30 223 aa20.9■□□□□ 0.94
NEK2-202ENST00000366999 ADCY9O60503 1353 aa20.9■□□□□ 0.94
NEK2-202ENST00000366999 CHD1LQ86WJ1 897 aa20.9■□□□□ 0.94
NEK2-202ENST00000366999 SEC24BO95487 1268 aa20.89■□□□□ 0.94
NEK2-202ENST00000366999 IL2RBP14784 551 aa20.89■□□□□ 0.94
NEK2-202ENST00000366999 ZNF496Q96IT1 587 aaPredicted RBP20.89■□□□□ 0.94
NEK2-202ENST00000366999 PLCH1Q4KWH8 1693 aa20.89■□□□□ 0.93
NEK2-202ENST00000366999 UBR2Q8IWV8 1755 aa20.89■□□□□ 0.93
NEK2-202ENST00000366999 PAPPAQ13219 1627 aa20.88■□□□□ 0.93
NEK2-202ENST00000366999 EVA1CP58658 441 aa20.88■□□□□ 0.93
NEK2-202ENST00000366999 PDIA6Q15084 440 aa20.88■□□□□ 0.93
NEK2-202ENST00000366999 GCC1Q96CN9 775 aa20.88■□□□□ 0.93
NEK2-202ENST00000366999 PCDH11XQ9BZA7 1347 aa20.88■□□□□ 0.93
NEK2-202ENST00000366999 PCDH11YQ9BZA8 1340 aa20.88■□□□□ 0.93
NEK2-202ENST00000366999 ANKRD45Q5TZF3 282 aa20.87■□□□□ 0.93
NEK2-202ENST00000366999 USP35Q9P2H5 1018 aa20.87■□□□□ 0.93
NEK2-202ENST00000366999 WNK3Q9BYP7 1800 aa20.87■□□□□ 0.93
NEK2-202ENST00000366999 DCTPP1Q9H773 170 aa20.87■□□□□ 0.93
NEK2-202ENST00000366999 PI4KAP2A4QPH2 592 aa20.86■□□□□ 0.93
NEK2-202ENST00000366999 PI4KAP1Q8N8J0 262 aa20.86■□□□□ 0.93
NEK2-202ENST00000366999 DBF4Q9UBU7 674 aaPredicted RBP20.86■□□□□ 0.93
NEK2-202ENST00000366999 LAMB4A4D0S4 1761 aa20.86■□□□□ 0.93
NEK2-202ENST00000366999 RPAP2Q8IXW5 612 aaPredicted RBP20.86■□□□□ 0.93
NEK2-202ENST00000366999 USP44Q9H0E7 712 aa20.86■□□□□ 0.93
NEK2-202ENST00000366999 NRAPQ86VF7 1730 aa20.85■□□□□ 0.93
NEK2-202ENST00000366999 DISP2A7MBM2 1401 aa20.85■□□□□ 0.93
NEK2-202ENST00000366999 HSP90AB1P08238 724 aaKnown RBP20.84■□□□□ 0.93
NEK2-202ENST00000366999 CABP4P57796 275 aa20.84■□□□□ 0.93
NEK2-202ENST00000366999 ANP32AP39687 249 aaKnown RBP20.84■□□□□ 0.93
NEK2-202ENST00000366999 NKX1-1Q15270 411 aaPredicted RBP20.83■□□□□ 0.93
NEK2-202ENST00000366999 BEND3Q5T5X7 828 aa20.83■□□□□ 0.93
NEK2-202ENST00000366999 DDX54Q8TDD1 881 aaKnown RBP20.83■□□□□ 0.93
NEK2-202ENST00000366999 DNAAF4Q8WXU2 420 aa20.83■□□□□ 0.93
NEK2-202ENST00000366999 USP16Q9Y5T5 823 aa20.83■□□□□ 0.92
NEK2-202ENST00000366999 KCPQ6ZWJ8 1503 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms