RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 HDGFP51858 240 aaKnown RBP16.6■□□□□ 0.25
PRKN-205ENST00000366897 G2E3Q7L622 706 aa16.6■□□□□ 0.25
PRKN-205ENST00000366897 REC8O95072 547 aa16.6■□□□□ 0.25
PRKN-205ENST00000366897 SLC4A2P04920 1241 aa16.6■□□□□ 0.25
PRKN-205ENST00000366897 LRSAM1Q6UWE0 723 aa16.6■□□□□ 0.25
PRKN-205ENST00000366897 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.6■□□□□ 0.25
PRKN-205ENST00000366897 JARID2Q92833 1246 aaPredicted RBP16.6■□□□□ 0.25
PRKN-205ENST00000366897 UPF3BQ9BZI7 483 aaKnown RBP16.6■□□□□ 0.25
PRKN-205ENST00000366897 NUTM2FA1L443 756 aa16.59■□□□□ 0.25
PRKN-205ENST00000366897 LMOD3Q0VAK6 560 aa16.59■□□□□ 0.25
PRKN-205ENST00000366897 RPAP2Q8IXW5 612 aaPredicted RBP16.59■□□□□ 0.25
PRKN-205ENST00000366897 RGS12O14924 1447 aa16.59■□□□□ 0.25
PRKN-205ENST00000366897 COG3Q96JB2 828 aa16.59■□□□□ 0.25
PRKN-205ENST00000366897 ZKSCAN5Q9Y2L8 839 aa16.59■□□□□ 0.25
PRKN-205ENST00000366897 PDE1AP54750 535 aa16.58■□□□□ 0.24
PRKN-205ENST00000366897 CDC42BPGQ6DT37 1551 aa16.58■□□□□ 0.24
PRKN-205ENST00000366897 NECTIN2Q92692 538 aa16.57■□□□□ 0.24
PRKN-205ENST00000366897 KIF20BQ96Q89 1820 aa16.57■□□□□ 0.24
PRKN-205ENST00000366897 PTMAP06454 111 aaKnown RBP16.57■□□□□ 0.24
PRKN-205ENST00000366897 RILPL2Q969X0 211 aa16.57■□□□□ 0.24
PRKN-205ENST00000366897 ANO2Q9NQ90 1003 aa16.57■□□□□ 0.24
PRKN-205ENST00000366897 GADD45BO75293 160 aaPredicted RBP16.56■□□□□ 0.24
PRKN-205ENST00000366897 PLEKHG1Q9ULL1 1385 aa16.56■□□□□ 0.24
PRKN-205ENST00000366897 FOXO3O43524 673 aa16.56■□□□□ 0.24
PRKN-205ENST00000366897 ZNF500O60304 480 aaPredicted RBP16.56■□□□□ 0.24
PRKN-205ENST00000366897 ZNF830Q96NB3 372 aaPredicted RBP16.56■□□□□ 0.24
PRKN-205ENST00000366897 LARP6Q9BRS8 491 aaKnown RBP16.56■□□□□ 0.24
PRKN-205ENST00000366897 CPS1P31327 1500 aa16.56■□□□□ 0.24
PRKN-205ENST00000366897 TRIM6-TRIM34B2RNG4 842 aa16.56■□□□□ 0.24
PRKN-205ENST00000366897 DLG5Q8TDM6 1919 aa16.55■□□□□ 0.24
PRKN-205ENST00000366897 STRCP1A6NGW2 1772 aa16.55■□□□□ 0.24
PRKN-205ENST00000366897 TSC1Q92574 1164 aa16.55■□□□□ 0.24
PRKN-205ENST00000366897 EIF4A2Q14240 407 aaKnown RBP16.54■□□□□ 0.24
PRKN-205ENST00000366897 HS1BP3Q53T59 392 aa16.54■□□□□ 0.24
PRKN-205ENST00000366897 ALKQ9UM73 1620 aa16.54■□□□□ 0.24
PRKN-205ENST00000366897 CHL1O00533 1208 aa16.53■□□□□ 0.24
PRKN-205ENST00000366897 C17orf53Q8N3J3 647 aaPredicted RBP16.53■□□□□ 0.24
PRKN-205ENST00000366897 NUDT16Q96DE0 195 aaKnown RBP16.53■□□□□ 0.24
PRKN-205ENST00000366897 UNC5CLQ8IV45 518 aa16.53■□□□□ 0.24
PRKN-205ENST00000366897 WASLO00401 505 aaPredicted RBP16.52■□□□□ 0.24
PRKN-205ENST00000366897 HSP90AB2PQ58FF8 381 aa16.52■□□□□ 0.24
PRKN-205ENST00000366897 ESYT1Q9BSJ8 1104 aa16.52■□□□□ 0.24
PRKN-205ENST00000366897 IL25Q9H293 177 aa16.52■□□□□ 0.24
PRKN-205ENST00000366897 BRD1O95696 1058 aa16.52■□□□□ 0.24
PRKN-205ENST00000366897 MAP4K4O95819 1239 aaPredicted RBP16.52■□□□□ 0.24
PRKN-205ENST00000366897 UBAP1LF5GYI3 381 aa16.52■□□□□ 0.23
PRKN-205ENST00000366897 PNMA6EA0A0J9YXQ4 647 aa16.51■□□□□ 0.23
PRKN-205ENST00000366897 TSPY26PQ9H489 355 aa16.51■□□□□ 0.23
PRKN-205ENST00000366897 CCDC39Q9UFE4 941 aa16.51■□□□□ 0.23
PRKN-205ENST00000366897 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.51■□□□□ 0.23
PRKN-205ENST00000366897 FAM177BA6PVY3 158 aa16.51■□□□□ 0.23
PRKN-205ENST00000366897 HMMRO75330 724 aa16.51■□□□□ 0.23
PRKN-205ENST00000366897 KCNA6P17658 529 aa16.51■□□□□ 0.23
PRKN-205ENST00000366897 CDK12Q9NYV4 1490 aaPredicted RBP16.5■□□□□ 0.23
PRKN-205ENST00000366897 KIF24Q5T7B8 1368 aa16.5■□□□□ 0.23
PRKN-205ENST00000366897 DNTTIP2Q5QJE6 756 aaKnown RBP16.5■□□□□ 0.23
PRKN-205ENST00000366897 TBX22Q9Y458 520 aa16.5■□□□□ 0.23
PRKN-205ENST00000366897 ADAMTS13Q76LX8 1427 aa16.5■□□□□ 0.23
PRKN-205ENST00000366897 MBD3O95983 291 aa16.5■□□□□ 0.23
PRKN-205ENST00000366897 IL1RAPL2Q9NP60 686 aa16.5■□□□□ 0.23
PRKN-205ENST00000366897 USP25Q9UHP3 1055 aa16.5■□□□□ 0.23
PRKN-205ENST00000366897 PRDM10Q9NQV6 1147 aa16.49■□□□□ 0.23
PRKN-205ENST00000366897 EDC4Q6P2E9 1401 aaKnown RBP16.49■□□□□ 0.23
PRKN-205ENST00000366897 RBM33Q96EV2 1170 aaKnown RBP16.49■□□□□ 0.23
PRKN-205ENST00000366897 PLCB2Q00722 1185 aa16.48■□□□□ 0.23
PRKN-205ENST00000366897 USP48Q86UV5 1035 aa16.48■□□□□ 0.23
PRKN-205ENST00000366897 TSPYL4Q9UJ04 414 aa16.48■□□□□ 0.23
PRKN-205ENST00000366897 ATP7BP35670 1465 aa16.48■□□□□ 0.23
PRKN-205ENST00000366897 MX1P20591 662 aa16.48■□□□□ 0.23
PRKN-205ENST00000366897 CHMLP26374 656 aa16.48■□□□□ 0.23
PRKN-205ENST00000366897 TTC12Q9H892 705 aaPredicted RBP16.48■□□□□ 0.23
PRKN-205ENST00000366897 PTPRCP08575 1304 aa16.47■□□□□ 0.23
PRKN-205ENST00000366897 CPSF1Q10570 1443 aaKnown RBP16.47■□□□□ 0.23
PRKN-205ENST00000366897 LRRCC1Q9C099 1032 aa16.47■□□□□ 0.23
PRKN-205ENST00000366897 CCDC61Q9Y6R9 512 aa16.47■□□□□ 0.23
PRKN-205ENST00000366897 GNAI2P04899 355 aa16.46■□□□□ 0.23
PRKN-205ENST00000366897 TERF1P54274 439 aa16.46■□□□□ 0.23
PRKN-205ENST00000366897 CUL4AQ13619 759 aa16.46■□□□□ 0.23
PRKN-205ENST00000366897 NUTM1Q86Y26 1132 aa16.46■□□□□ 0.23
PRKN-205ENST00000366897 FKBP5Q13451 457 aaPredicted RBP16.46■□□□□ 0.23
PRKN-205ENST00000366897 PROSER2Q86WR7 435 aaPredicted RBP16.46■□□□□ 0.23
PRKN-205ENST00000366897 OSBPL3Q9H4L5 887 aa16.46■□□□□ 0.23
PRKN-205ENST00000366897 CNPY2Q9Y2B0 182 aa16.46■□□□□ 0.23
PRKN-205ENST00000366897 HCLS1P14317 486 aaPredicted RBP16.45■□□□□ 0.22
PRKN-205ENST00000366897 CSPP1Q1MSJ5 1256 aa16.45■□□□□ 0.22
PRKN-205ENST00000366897 TMEM94Q12767 1356 aa16.45■□□□□ 0.22
PRKN-205ENST00000366897 TOM1O60784 492 aa16.45■□□□□ 0.22
PRKN-205ENST00000366897 MCCP23508 829 aa16.45■□□□□ 0.22
PRKN-205ENST00000366897 SASS6Q6UVJ0 657 aa16.45■□□□□ 0.22
PRKN-205ENST00000366897 PRR36Q9H6K5 1346 aa16.45■□□□□ 0.22
PRKN-205ENST00000366897 METP08581 1390 aa16.44■□□□□ 0.22
PRKN-205ENST00000366897 AATKQ6ZMQ8 1374 aa16.44■□□□□ 0.22
PRKN-205ENST00000366897 CPA1P15085 419 aa16.44■□□□□ 0.22
PRKN-205ENST00000366897 KIAA2012Q0VF49 1180 aa16.44■□□□□ 0.22
PRKN-205ENST00000366897 LRRFIP2Q9Y608 721 aaKnown RBP16.44■□□□□ 0.22
PRKN-205ENST00000366897 PIP4K2BP78356 416 aa16.44■□□□□ 0.22
PRKN-205ENST00000366897 SRCIN1Q9C0H9 1055 aa16.44■□□□□ 0.22
PRKN-205ENST00000366897 MTHFSDQ2M296 383 aaKnown RBP16.44■□□□□ 0.22
PRKN-205ENST00000366897 NRXN3Q9Y4C0 1643 aa16.43■□□□□ 0.22
PRKN-205ENST00000366897 SALL3Q9BXA9 1300 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms