RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 USHBP1Q8N6Y0 703 aa15.31■□□□□ 0.04
CSNK1E-202ENST00000366216 TMC1Q8TDI8 760 aa15.31■□□□□ 0.04
CSNK1E-202ENST00000366216 AK7Q96M32 723 aa15.31■□□□□ 0.04
CSNK1E-202ENST00000366216 PXDNLA1KZ92 1463 aa15.31■□□□□ 0.04
CSNK1E-202ENST00000366216 PHF14O94880 888 aa15.29■□□□□ 0.04
CSNK1E-202ENST00000366216 CGNL1Q0VF96 1302 aa15.28■□□□□ 0.04
CSNK1E-202ENST00000366216 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.28■□□□□ 0.04
CSNK1E-202ENST00000366216 HDGFL2Q7Z4V5 671 aaPredicted RBP15.28■□□□□ 0.04
CSNK1E-202ENST00000366216 C16orf71Q8IYS4 520 aaPredicted RBP15.28■□□□□ 0.04
CSNK1E-202ENST00000366216 POLR3GLQ9BT43 218 aa15.28■□□□□ 0.04
CSNK1E-202ENST00000366216 C4AP0C0L4 1744 aa15.28■□□□□ 0.04
CSNK1E-202ENST00000366216 FSTL1Q12841 308 aa15.27■□□□□ 0.04
CSNK1E-202ENST00000366216 CYP27B1O15528 508 aa15.26■□□□□ 0.03
CSNK1E-202ENST00000366216 SSFA2P28290 1259 aa15.26■□□□□ 0.03
CSNK1E-202ENST00000366216 RRS1Q15050 365 aaKnown RBP15.25■□□□□ 0.03
CSNK1E-202ENST00000366216 MPRIPQ6WCQ1 1025 aa15.25■□□□□ 0.03
CSNK1E-202ENST00000366216 ARHGAP27Q6ZUM4 889 aa15.25■□□□□ 0.03
CSNK1E-202ENST00000366216 PRKRIP1Q9H875 184 aaPredicted RBP15.25■□□□□ 0.03
CSNK1E-202ENST00000366216 BCS1LQ9Y276 419 aa15.25■□□□□ 0.03
CSNK1E-202ENST00000366216 COL5A3P25940 1745 aaPredicted RBP15.25■□□□□ 0.03
CSNK1E-202ENST00000366216 PLEKHG2Q9H7P9 1386 aa15.24■□□□□ 0.03
CSNK1E-202ENST00000366216 KIF20BQ96Q89 1820 aa15.24■□□□□ 0.03
CSNK1E-202ENST00000366216 PCDH11XQ9BZA7 1347 aa15.24■□□□□ 0.03
CSNK1E-202ENST00000366216 PCDH11YQ9BZA8 1340 aa15.24■□□□□ 0.03
CSNK1E-202ENST00000366216 KCPQ6ZWJ8 1503 aa15.24■□□□□ 0.03
CSNK1E-202ENST00000366216 AMPHP49418 695 aa15.24■□□□□ 0.03
CSNK1E-202ENST00000366216 LINC00116Q8NCU8 138 aa15.24■□□□□ 0.03
CSNK1E-202ENST00000366216 RAPGEF4Q8WZA2 1011 aa15.24■□□□□ 0.03
CSNK1E-202ENST00000366216 SMARCC1Q92922 1105 aaPredicted RBP15.24■□□□□ 0.03
CSNK1E-202ENST00000366216 TERF2IPQ9NYB0 399 aa15.24■□□□□ 0.03
CSNK1E-202ENST00000366216 TGFB2P61812 414 aa15.23■□□□□ 0.03
CSNK1E-202ENST00000366216 C10orf71Q711Q0 1435 aa15.23■□□□□ 0.03
CSNK1E-202ENST00000366216 RTL1A6NKG5 1358 aa15.23■□□□□ 0.03
CSNK1E-202ENST00000366216 ZNF831Q5JPB2 1677 aa15.22■□□□□ 0.03
CSNK1E-202ENST00000366216 A0A0G2JLW4 131 aa15.22■□□□□ 0.03
CSNK1E-202ENST00000366216 MMP10P09238 476 aa15.22■□□□□ 0.03
CSNK1E-202ENST00000366216 PIGBQ92521 554 aa15.22■□□□□ 0.03
CSNK1E-202ENST00000366216 MYH14Q7Z406 1995 aaKnown RBP15.22■□□□□ 0.03
CSNK1E-202ENST00000366216 SMG6Q86US8 1419 aaKnown RBP15.21■□□□□ 0.03
CSNK1E-202ENST00000366216 ITPK1Q13572 414 aa15.21■□□□□ 0.03
CSNK1E-202ENST00000366216 PUS7Q96PZ0 661 aaKnown RBP15.21■□□□□ 0.03
CSNK1E-202ENST00000366216 TIAM2Q8IVF5 1701 aa15.2■□□□□ 0.02
CSNK1E-202ENST00000366216 KDM2BQ8NHM5 1336 aa15.2■□□□□ 0.02
CSNK1E-202ENST00000366216 TATP17735 454 aaPredicted RBP15.2■□□□□ 0.02
CSNK1E-202ENST00000366216 HSP90AB2PQ58FF8 381 aa15.2■□□□□ 0.02
CSNK1E-202ENST00000366216 C9orf131Q5VYM1 1079 aa15.2■□□□□ 0.02
CSNK1E-202ENST00000366216 COG3Q96JB2 828 aa15.2■□□□□ 0.02
CSNK1E-202ENST00000366216 GNPATO15228 680 aa15.19■□□□□ 0.02
CSNK1E-202ENST00000366216 PER1O15534 1290 aaPredicted RBP15.19■□□□□ 0.02
CSNK1E-202ENST00000366216 FCHSD2O94868 740 aa15.19■□□□□ 0.02
CSNK1E-202ENST00000366216 HSPA1AP0DMV8 641 aaKnown RBP15.19■□□□□ 0.02
CSNK1E-202ENST00000366216 HSPA1BP0DMV9 641 aaKnown RBP15.19■□□□□ 0.02
CSNK1E-202ENST00000366216 LOC102724428A0A0B4J2F2 783 aa15.18■□□□□ 0.02
CSNK1E-202ENST00000366216 CENPBP07199 599 aaPredicted RBP15.18■□□□□ 0.02
CSNK1E-202ENST00000366216 SIK1P57059 783 aa15.18■□□□□ 0.02
CSNK1E-202ENST00000366216 DICER1Q9UPY3 1922 aaKnown RBP15.17■□□□□ 0.02
CSNK1E-202ENST00000366216 DLEC1Q9Y238 1755 aa15.17■□□□□ 0.02
CSNK1E-202ENST00000366216 FYB1O15117 783 aa15.17■□□□□ 0.02
CSNK1E-202ENST00000366216 SLC34A2O95436 690 aa15.17■□□□□ 0.02
CSNK1E-202ENST00000366216 DPEP1P16444 411 aa15.17■□□□□ 0.02
CSNK1E-202ENST00000366216 SMC1BQ8NDV3 1235 aa15.17■□□□□ 0.02
CSNK1E-202ENST00000366216 GGNBP2Q9H3C7 697 aa15.17■□□□□ 0.02
CSNK1E-202ENST00000366216 PANK3Q9H999 370 aa15.17■□□□□ 0.02
CSNK1E-202ENST00000366216 RRAGCQ9HB90 399 aa15.17■□□□□ 0.02
CSNK1E-202ENST00000366216 RALBP1Q15311 655 aa15.16■□□□□ 0.02
CSNK1E-202ENST00000366216 ASAP1Q9ULH1 1129 aa15.16■□□□□ 0.02
CSNK1E-202ENST00000366216 AFDNP55196 1824 aaKnown RBP15.15■□□□□ 0.02
CSNK1E-202ENST00000366216 KCNA3P22001 575 aa15.15■□□□□ 0.02
CSNK1E-202ENST00000366216 NKX1-1Q15270 411 aaPredicted RBP15.15■□□□□ 0.02
CSNK1E-202ENST00000366216 NLGN1Q8N2Q7 840 aa15.15■□□□□ 0.02
CSNK1E-202ENST00000366216 YTHDC1Q96MU7 727 aaKnown RBP15.15■□□□□ 0.02
CSNK1E-202ENST00000366216 SLC4A9Q96Q91 983 aa15.15■□□□□ 0.02
CSNK1E-202ENST00000366216 CCDC87Q9NVE4 849 aa15.15■□□□□ 0.02
CSNK1E-202ENST00000366216 NCAPD2Q15021 1401 aa15.15■□□□□ 0.02
CSNK1E-202ENST00000366216 ANKRD26Q9UPS8 1709 aa15.14■□□□□ 0.01
CSNK1E-202ENST00000366216 INSRP06213 1382 aa15.14■□□□□ 0.01
CSNK1E-202ENST00000366216 RNF181Q9P0P0 153 aa15.14■□□□□ 0.01
CSNK1E-202ENST00000366216 ATP6V1AP38606 617 aa15.13■□□□□ 0.01
CSNK1E-202ENST00000366216 TRAPPC3LQ5T215 181 aa15.12■□□□□ 0.01
CSNK1E-202ENST00000366216 DCAF5Q96JK2 942 aa15.12■□□□□ 0.01
CSNK1E-202ENST00000366216 NPC1L1Q9UHC9 1359 aa15.11■□□□□ 0.01
CSNK1E-202ENST00000366216 VIRMAQ69YN4 1812 aaKnown RBP15.11■□□□□ 0.01
CSNK1E-202ENST00000366216 ATG3Q9NT62 314 aa15.11■□□□□ 0.01
CSNK1E-202ENST00000366216 TMOD3Q9NYL9 352 aa15.11■□□□□ 0.01
CSNK1E-202ENST00000366216 PIM2Q9P1W9 311 aa15.11■□□□□ 0.01
CSNK1E-202ENST00000366216 RTCBQ9Y3I0 505 aaKnown RBP15.11■□□□□ 0.01
CSNK1E-202ENST00000366216 PARP3Q9Y6F1 533 aa15.11■□□□□ 0.01
CSNK1E-202ENST00000366216 KDRP35968 1356 aa15.11■□□□□ 0.01
CSNK1E-202ENST00000366216 EMILIN1Q9Y6C2 1016 aa15.1■□□□□ 0.01
CSNK1E-202ENST00000366216 MYBBP1AQ9BQG0 1328 aaKnown RBP15.1■□□□□ 0.01
CSNK1E-202ENST00000366216 FLT4P35916 1363 aa15.1■□□□□ 0.01
CSNK1E-202ENST00000366216 GYS1P13807 737 aa15.09■□□□□ 0.01
CSNK1E-202ENST00000366216 DALRD3Q5D0E6 543 aaKnown RBP15.09■□□□□ 0.01
CSNK1E-202ENST00000366216 KNSTRNQ9Y448 316 aa15.09■□□□□ 0.01
CSNK1E-202ENST00000366216 ARHGEF1Q92888 912 aaKnown RBP15.08■□□□□ 0
CSNK1E-202ENST00000366216 MRS2Q9HD23 443 aa15.08■□□□□ 0
CSNK1E-202ENST00000366216 SPG7Q9UQ90 795 aa15.08■□□□□ 0
CSNK1E-202ENST00000366216 ZC3H4Q9UPT8 1303 aaKnown RBP15.08■□□□□ 0
CSNK1E-202ENST00000366216 KIF24Q5T7B8 1368 aa15.08■□□□□ 0
CSNK1E-202ENST00000366216 KDM6AO15550 1401 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms