RNA–Protein interactions for RNA: ENST00000365690.4

MIR539-201, microRNA 539, humanhuman

BASIC

Gene MIR539, Length 78 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR539-201ENST00000365690 KRTAP4-9Q9BYQ8 210 aa4.62□□□□□ -1.67
MIR539-201ENST00000365690 GPAMQ9HCL2 828 aa4.62□□□□□ -1.67
MIR539-201ENST00000365690 BNIP3LO60238 219 aa4.61□□□□□ -1.67
MIR539-201ENST00000365690 CLN3Q13286 438 aa4.61□□□□□ -1.67
MIR539-201ENST00000365690 SLC27A3Q5K4L6 730 aa4.61□□□□□ -1.67
MIR539-201ENST00000365690 PPP2R2DQ66LE6 453 aa4.61□□□□□ -1.67
MIR539-201ENST00000365690 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.61□□□□□ -1.67
MIR539-201ENST00000365690 TAS1R3Q7RTX0 852 aa4.61□□□□□ -1.67
MIR539-201ENST00000365690 ABHD17AQ96GS6 310 aa4.61□□□□□ -1.67
MIR539-201ENST00000365690 NOP53Q9NZM5 478 aaKnown RBP4.61□□□□□ -1.67
MIR539-201ENST00000365690 ARID1BQ8NFD5 2236 aaPredicted RBP4.6□□□□□ -1.67
MIR539-201ENST00000365690 NEURL1BA8MQ27 555 aa4.6□□□□□ -1.67
MIR539-201ENST00000365690 HYAL3O43820 417 aaPredicted RBP4.6□□□□□ -1.67
MIR539-201ENST00000365690 BMP4P12644 408 aa4.6□□□□□ -1.67
MIR539-201ENST00000365690 CHSY3Q70JA7 882 aa4.6□□□□□ -1.67
MIR539-201ENST00000365690 NBPF11Q86T75 865 aa4.6□□□□□ -1.67
MIR539-201ENST00000365690 KDM2AQ9Y2K7 1162 aa4.6□□□□□ -1.67
MIR539-201ENST00000365690 PIK3R2O00459 728 aa4.59□□□□□ -1.67
MIR539-201ENST00000365690 GIGYF1O75420 1035 aaPredicted RBP4.59□□□□□ -1.67
MIR539-201ENST00000365690 FGFR3P22607 806 aa4.59□□□□□ -1.67
MIR539-201ENST00000365690 SCTRP47872 440 aa4.59□□□□□ -1.67
MIR539-201ENST00000365690 ERVK-9P63128 1117 aa4.59□□□□□ -1.67
MIR539-201ENST00000365690 LRP8Q14114 963 aa4.59□□□□□ -1.67
MIR539-201ENST00000365690 FCHSD1Q86WN1 690 aa4.59□□□□□ -1.67
MIR539-201ENST00000365690 DZIP3Q86Y13 1208 aaKnown RBP4.59□□□□□ -1.67
MIR539-201ENST00000365690 SEPT12Q8IYM1 358 aa4.59□□□□□ -1.67
MIR539-201ENST00000365690 PLVAPQ9BX97 442 aa4.59□□□□□ -1.67
MIR539-201ENST00000365690 KRTAP4-2Q9BYR5 136 aa4.59□□□□□ -1.67
MIR539-201ENST00000365690 RUBCNLQ9H714 662 aa4.59□□□□□ -1.67
MIR539-201ENST00000365690 ATXN7L1Q9ULK2 861 aaPredicted RBP4.59□□□□□ -1.67
MIR539-201ENST00000365690 PHF24Q9UPV7 400 aa4.59□□□□□ -1.67
MIR539-201ENST00000365690 TRIM66O15016 1216 aa4.58□□□□□ -1.68
MIR539-201ENST00000365690 SPATA31C1P0DKV0 1188 aa4.58□□□□□ -1.68
MIR539-201ENST00000365690 ARAFP10398 606 aa4.58□□□□□ -1.68
MIR539-201ENST00000365690 PHKA2P46019 1235 aa4.58□□□□□ -1.68
MIR539-201ENST00000365690 NLRP3Q96P20 1036 aa4.58□□□□□ -1.68
MIR539-201ENST00000365690 HRH3Q9Y5N1 445 aa4.58□□□□□ -1.68
MIR539-201ENST00000365690 TRAK2O60296 914 aa4.57□□□□□ -1.68
MIR539-201ENST00000365690 CLK2P49760 499 aaKnown RBP4.57□□□□□ -1.68
MIR539-201ENST00000365690 OSBPL3Q9H4L5 887 aa4.57□□□□□ -1.68
MIR539-201ENST00000365690 DNAAF2Q9NVR5 837 aaKnown RBP4.57□□□□□ -1.68
MIR539-201ENST00000365690 TULP1O00294 542 aaPredicted RBP4.56□□□□□ -1.68
MIR539-201ENST00000365690 IL2RAP01589 272 aa4.56□□□□□ -1.68
MIR539-201ENST00000365690 MSX1P28360 303 aa4.56□□□□□ -1.68
MIR539-201ENST00000365690 COL9A3Q14050 684 aaPredicted RBP4.56□□□□□ -1.68
MIR539-201ENST00000365690 LBRQ14739 615 aaKnown RBP4.56□□□□□ -1.68
MIR539-201ENST00000365690 CC2D2BQ6DHV5 1058 aa4.56□□□□□ -1.68
MIR539-201ENST00000365690 ARHGEF10LQ9HCE6 1279 aa4.56□□□□□ -1.68
MIR539-201ENST00000365690 HMX1Q9NP08 348 aaPredicted RBP4.56□□□□□ -1.68
MIR539-201ENST00000365690 POLR3EQ9NVU0 708 aa4.56□□□□□ -1.68
MIR539-201ENST00000365690 A0A1B0GTH6 734 aa4.55□□□□□ -1.68
MIR539-201ENST00000365690 CENPCQ03188 943 aa4.55□□□□□ -1.68
MIR539-201ENST00000365690 MCTP1Q6DN14 999 aa4.55□□□□□ -1.68
MIR539-201ENST00000365690 FHDC1Q9C0D6 1143 aaPredicted RBP4.55□□□□□ -1.68
MIR539-201ENST00000365690 RAB6BQ9NRW1 208 aa4.55□□□□□ -1.68
MIR539-201ENST00000365690 C4orf17Q53FE4 359 aa4.54□□□□□ -1.68
MIR539-201ENST00000365690 FAM229AH3BQW9 127 aa4.53□□□□□ -1.68
MIR539-201ENST00000365690 ZC3H15Q8WU90 426 aaKnown RBP4.53□□□□□ -1.68
MIR539-201ENST00000365690 CNKSR1Q969H4 720 aa4.53□□□□□ -1.68
MIR539-201ENST00000365690 MDFIQ99750 246 aa4.53□□□□□ -1.68
MIR539-201ENST00000365690 ESYT1Q9BSJ8 1104 aa4.53□□□□□ -1.68
MIR539-201ENST00000365690 CRISPLD1Q9H336 500 aa4.53□□□□□ -1.68
MIR539-201ENST00000365690 CYP2U1Q7Z449 544 aa4.52□□□□□ -1.69
MIR539-201ENST00000365690 FMNL2Q96PY5 1086 aa4.52□□□□□ -1.69
MIR539-201ENST00000365690 ZCCHC2Q9C0B9 1178 aaKnown RBP4.52□□□□□ -1.69
MIR539-201ENST00000365690 H2AFB1P0C5Y9 115 aa4.51□□□□□ -1.69
MIR539-201ENST00000365690 H2AFB2P0C5Z0 115 aa4.51□□□□□ -1.69
MIR539-201ENST00000365690 ADH6P28332 368 aa4.51□□□□□ -1.69
MIR539-201ENST00000365690 COL17A1Q9UMD9 1497 aaPredicted RBP4.5□□□□□ -1.69
MIR539-201ENST00000365690 COBLO75128 1261 aa4.5□□□□□ -1.69
MIR539-201ENST00000365690 CD33P20138 364 aa4.5□□□□□ -1.69
MIR539-201ENST00000365690 PCBP4P57723 403 aaKnown RBP4.5□□□□□ -1.69
MIR539-201ENST00000365690 PLCB2Q00722 1185 aa4.5□□□□□ -1.69
MIR539-201ENST00000365690 EFHC2Q5JST6 749 aa4.5□□□□□ -1.69
MIR539-201ENST00000365690 FAM182BQ5T319 152 aa4.5□□□□□ -1.69
MIR539-201ENST00000365690 XAGE2Q96GT9 111 aa4.5□□□□□ -1.69
MIR539-201ENST00000365690 ZSCAN10Q96SZ4 725 aaPredicted RBP4.5□□□□□ -1.69
MIR539-201ENST00000365690 TRIM34Q9BYJ4 488 aa4.5□□□□□ -1.69
MIR539-201ENST00000365690 PCDHGC4Q9Y5F7 938 aa4.5□□□□□ -1.69
MIR539-201ENST00000365690 CSB-PGBD3P0DP91 1061 aa4.49□□□□□ -1.69
MIR539-201ENST00000365690 ATP4AP20648 1035 aa4.49□□□□□ -1.69
MIR539-201ENST00000365690 TNP2Q05952 138 aa4.49□□□□□ -1.69
MIR539-201ENST00000365690 GRIK4Q16099 956 aa4.49□□□□□ -1.69
MIR539-201ENST00000365690 PGBD3Q8N328 593 aa4.49□□□□□ -1.69
MIR539-201ENST00000365690 PROCA1Q8NCQ7 364 aaPredicted RBP4.49□□□□□ -1.69
MIR539-201ENST00000365690 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.49□□□□□ -1.69
MIR539-201ENST00000365690 AVENQ9NQS1 362 aaPredicted RBP4.49□□□□□ -1.69
MIR539-201ENST00000365690 STAU1O95793 577 aaKnown RBP4.48□□□□□ -1.69
MIR539-201ENST00000365690 GNRH1P01148 92 aa4.48□□□□□ -1.69
MIR539-201ENST00000365690 MAPTP10636 758 aaKnown RBP4.48□□□□□ -1.69
MIR539-201ENST00000365690 PDE4DQ08499 809 aa4.48□□□□□ -1.69
MIR539-201ENST00000365690 TRIM52Q96A61 297 aa4.48□□□□□ -1.69
MIR539-201ENST00000365690 STARD13Q9Y3M8 1113 aa4.48□□□□□ -1.69
MIR539-201ENST00000365690 PCDHB9Q9Y5E1 797 aa4.48□□□□□ -1.69
MIR539-201ENST00000365690 DCDC2BA2VCK2 349 aa4.47□□□□□ -1.69
MIR539-201ENST00000365690 AP1G2O75843 785 aa4.47□□□□□ -1.69
MIR539-201ENST00000365690 APBA3O96018 575 aa4.47□□□□□ -1.69
MIR539-201ENST00000365690 FBXO45P0C2W1 286 aa4.47□□□□□ -1.69
MIR539-201ENST00000365690 SELPP16109 830 aa4.47□□□□□ -1.69
MIR539-201ENST00000365690 ADGRE1Q14246 886 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms