RNA–Protein interactions for RNA: ENST00000363858.1

RNU6-271P-201, Transcript of RNA, U6 small nuclear 271, pseudogene, humanhuman

BASIC

Gene RNU6-271P, Length 105 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-271P-201ENST00000363858 PPFIA3O75145 1194 aa4.01□□□□□ -1.77
RNU6-271P-201ENST00000363858 LMOD1P29536 600 aaPredicted RBP4.01□□□□□ -1.77
RNU6-271P-201ENST00000363858 FOXK2Q01167 660 aa4.01□□□□□ -1.77
RNU6-271P-201ENST00000363858 POU4F2Q12837 409 aa4.01□□□□□ -1.77
RNU6-271P-201ENST00000363858 PTK7Q13308 1070 aa4.01□□□□□ -1.77
RNU6-271P-201ENST00000363858 MTFR1Q15390 333 aa4.01□□□□□ -1.77
RNU6-271P-201ENST00000363858 NBPF10Q6P3W6 841 aaKnown RBP4.01□□□□□ -1.77
RNU6-271P-201ENST00000363858 TREML4Q6UXN2 200 aa4.01□□□□□ -1.77
RNU6-271P-201ENST00000363858 PRICKLE2Q7Z3G6 844 aa4.01□□□□□ -1.77
RNU6-271P-201ENST00000363858 SIX5Q8N196 739 aa4.01□□□□□ -1.77
RNU6-271P-201ENST00000363858 CCDC82Q8N4S0 544 aa4.01□□□□□ -1.77
RNU6-271P-201ENST00000363858 OGFOD1Q8N543 542 aa4.01□□□□□ -1.77
RNU6-271P-201ENST00000363858 NBPF15Q8N660 670 aa4.01□□□□□ -1.77
RNU6-271P-201ENST00000363858 CCDC155Q8N6L0 562 aa4.01□□□□□ -1.77
RNU6-271P-201ENST00000363858 KLRG1Q96E93 195 aa4.01□□□□□ -1.77
RNU6-271P-201ENST00000363858 SLC4A9Q96Q91 983 aa4.01□□□□□ -1.77
RNU6-271P-201ENST00000363858 NXF1Q9UBU9 619 aaKnown RBP4.01□□□□□ -1.77
RNU6-271P-201ENST00000363858 SERTAD1Q9UHV2 236 aa4.01□□□□□ -1.77
RNU6-271P-201ENST00000363858 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4□□□□□ -1.77
RNU6-271P-201ENST00000363858 USP17L15C9J2P7 530 aa4□□□□□ -1.77
RNU6-271P-201ENST00000363858 USP17L10C9JJH3 530 aa4□□□□□ -1.77
RNU6-271P-201ENST00000363858 USP17L13C9JLJ4 530 aa4□□□□□ -1.77
RNU6-271P-201ENST00000363858 USP17L12C9JPN9 530 aa4□□□□□ -1.77
RNU6-271P-201ENST00000363858 USP17L11C9JVI0 530 aa4□□□□□ -1.77
RNU6-271P-201ENST00000363858 USP17L21D6R901 530 aa4□□□□□ -1.77
RNU6-271P-201ENST00000363858 USP17L18D6R9N7 530 aa4□□□□□ -1.77
RNU6-271P-201ENST00000363858 USP17L22D6RA61 530 aa4□□□□□ -1.77
RNU6-271P-201ENST00000363858 USP17L17D6RBQ6 530 aa4□□□□□ -1.77
RNU6-271P-201ENST00000363858 USP17L19D6RCP7 530 aa4□□□□□ -1.77
RNU6-271P-201ENST00000363858 USP17L20D6RJB6 530 aa4□□□□□ -1.77
RNU6-271P-201ENST00000363858 VSIG8P0DPA2 414 aa4□□□□□ -1.77
RNU6-271P-201ENST00000363858 SMTNP53814 917 aa4□□□□□ -1.77
RNU6-271P-201ENST00000363858 USP17L24Q0WX57 530 aa4□□□□□ -1.77
RNU6-271P-201ENST00000363858 TLR1Q15399 786 aa4□□□□□ -1.77
RNU6-271P-201ENST00000363858 C4orf17Q53FE4 359 aa4□□□□□ -1.77
RNU6-271P-201ENST00000363858 CDCA8Q53HL2 280 aa4□□□□□ -1.77
RNU6-271P-201ENST00000363858 CCDC102BQ68D86 513 aa4□□□□□ -1.77
RNU6-271P-201ENST00000363858 LYSMD3Q7Z3D4 306 aa4□□□□□ -1.77
RNU6-271P-201ENST00000363858 PPARGC1BQ86YN6 1023 aaKnown RBP4□□□□□ -1.77
RNU6-271P-201ENST00000363858 GPR161Q8N6U8 529 aaKnown RBP4□□□□□ -1.77
RNU6-271P-201ENST00000363858 TPCN2Q8NHX9 752 aa4□□□□□ -1.77
RNU6-271P-201ENST00000363858 GAS2L2Q8NHY3 880 aa4□□□□□ -1.77
RNU6-271P-201ENST00000363858 ZDHHC1Q8WTX9 485 aa4□□□□□ -1.77
RNU6-271P-201ENST00000363858 ZNF594Q96JF6 807 aaPredicted RBP4□□□□□ -1.77
RNU6-271P-201ENST00000363858 DNAAF2Q9NVR5 837 aaKnown RBP4□□□□□ -1.77
RNU6-271P-201ENST00000363858 SLAIN2Q9P270 581 aa4□□□□□ -1.77
RNU6-271P-201ENST00000363858 ZMIZ1Q9ULJ6 1067 aa4□□□□□ -1.77
RNU6-271P-201ENST00000363858 C21orf2O43822 256 aa3.99□□□□□ -1.77
RNU6-271P-201ENST00000363858 LGR5O75473 907 aa3.99□□□□□ -1.77
RNU6-271P-201ENST00000363858 RFX1P22670 979 aa3.99□□□□□ -1.77
RNU6-271P-201ENST00000363858 LORP23490 312 aaPredicted RBP3.99□□□□□ -1.77
RNU6-271P-201ENST00000363858 KRT76Q01546 638 aa3.99□□□□□ -1.77
RNU6-271P-201ENST00000363858 UBAP2LQ14157 1087 aaKnown RBP3.99□□□□□ -1.77
RNU6-271P-201ENST00000363858 TBCELQ5QJ74 424 aa3.99□□□□□ -1.77
RNU6-271P-201ENST00000363858 SH3PXD2AQ5TCZ1 1133 aa3.99□□□□□ -1.77
RNU6-271P-201ENST00000363858 TNS4Q8IZW8 715 aa3.99□□□□□ -1.77
RNU6-271P-201ENST00000363858 TSEN2Q8NCE0 465 aaKnown RBP3.99□□□□□ -1.77
RNU6-271P-201ENST00000363858 SIRT1Q96EB6 747 aa3.99□□□□□ -1.77
RNU6-271P-201ENST00000363858 NLRP3Q96P20 1036 aa3.99□□□□□ -1.77
RNU6-271P-201ENST00000363858 HCN2Q9UL51 889 aa3.99□□□□□ -1.77
RNU6-271P-201ENST00000363858 A6NJY4 79 aa3.98□□□□□ -1.77
RNU6-271P-201ENST00000363858 FAM196BA6NMK8 535 aa3.98□□□□□ -1.77
RNU6-271P-201ENST00000363858 SUPT5HO00267 1087 aaKnown RBP3.98□□□□□ -1.77
RNU6-271P-201ENST00000363858 ATP4AP20648 1035 aa3.98□□□□□ -1.77
RNU6-271P-201ENST00000363858 RASA1P20936 1047 aa3.98□□□□□ -1.77
RNU6-271P-201ENST00000363858 ITGA6P23229 1130 aa3.98□□□□□ -1.77
RNU6-271P-201ENST00000363858 GMPRP36959 345 aa3.98□□□□□ -1.77
RNU6-271P-201ENST00000363858 PHKA2P46019 1235 aa3.98□□□□□ -1.77
RNU6-271P-201ENST00000363858 PSME1Q06323 249 aa3.98□□□□□ -1.77
RNU6-271P-201ENST00000363858 FAM69CQ0P6D2 419 aa3.98□□□□□ -1.77
RNU6-271P-201ENST00000363858 ESCO1Q5FWF5 840 aa3.98□□□□□ -1.77
RNU6-271P-201ENST00000363858 SLC27A3Q5K4L6 730 aa3.98□□□□□ -1.77
RNU6-271P-201ENST00000363858 POTEAQ6S8J7 498 aa3.98□□□□□ -1.77
RNU6-271P-201ENST00000363858 TRIM50Q86XT4 487 aa3.98□□□□□ -1.77
RNU6-271P-201ENST00000363858 LARGE2Q8N3Y3 721 aa3.98□□□□□ -1.77
RNU6-271P-201ENST00000363858 STK32AQ8WU08 396 aa3.98□□□□□ -1.77
RNU6-271P-201ENST00000363858 ZSCAN10Q96SZ4 725 aaPredicted RBP3.98□□□□□ -1.77
RNU6-271P-201ENST00000363858 SCHIP1Q9P0W5 487 aaPredicted RBP3.98□□□□□ -1.77
RNU6-271P-201ENST00000363858 CDK2AP1O14519 115 aa3.97□□□□□ -1.77
RNU6-271P-201ENST00000363858 WFS1O76024 890 aa3.97□□□□□ -1.77
RNU6-271P-201ENST00000363858 DPYDQ12882 1025 aa3.97□□□□□ -1.77
RNU6-271P-201ENST00000363858 DBN1Q16643 649 aa3.97□□□□□ -1.77
RNU6-271P-201ENST00000363858 TAS1R3Q7RTX0 852 aa3.97□□□□□ -1.77
RNU6-271P-201ENST00000363858 ANKMY2Q8IV38 441 aa3.97□□□□□ -1.77
RNU6-271P-201ENST00000363858 SLC9A9Q8IVB4 645 aa3.97□□□□□ -1.77
RNU6-271P-201ENST00000363858 NPAS3Q8IXF0 933 aa3.97□□□□□ -1.77
RNU6-271P-201ENST00000363858 C7orf43Q8WVR3 580 aa3.97□□□□□ -1.77
RNU6-271P-201ENST00000363858 NANOS1Q8WY41 292 aaKnown RBP3.97□□□□□ -1.77
RNU6-271P-201ENST00000363858 ZNF837Q96EG3 531 aaPredicted RBP3.97□□□□□ -1.77
RNU6-271P-201ENST00000363858 TSPAN10Q9H1Z9 355 aaPredicted RBP3.97□□□□□ -1.77
RNU6-271P-201ENST00000363858 ESF1Q9H501 851 aaKnown RBP3.97□□□□□ -1.77
RNU6-271P-201ENST00000363858 VRTNQ9H8Y1 702 aa3.97□□□□□ -1.77
RNU6-271P-201ENST00000363858 PARP3Q9Y6F1 533 aa3.97□□□□□ -1.77
RNU6-271P-201ENST00000363858 M0R2N6 131 aa3.96□□□□□ -1.78
RNU6-271P-201ENST00000363858 MSX1P28360 303 aa3.96□□□□□ -1.78
RNU6-271P-201ENST00000363858 TXLNAP40222 546 aa3.96□□□□□ -1.78
RNU6-271P-201ENST00000363858 PLA2G4AP47712 749 aa3.96□□□□□ -1.78
RNU6-271P-201ENST00000363858 ATP1A2P50993 1020 aa3.96□□□□□ -1.78
RNU6-271P-201ENST00000363858 GAS6Q14393 721 aa3.96□□□□□ -1.78
RNU6-271P-201ENST00000363858 WDR44Q5JSH3 913 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms