RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 PIK3C2GO75747 1445 aa16.64■□□□□ 0.26
CTR9-201ENST00000361367 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.64■□□□□ 0.25
CTR9-201ENST00000361367 ATP5J2-PTCD1G3V325 749 aa16.64■□□□□ 0.25
CTR9-201ENST00000361367 PHACTR3Q96KR7 559 aa16.63■□□□□ 0.25
CTR9-201ENST00000361367 EDC4Q6P2E9 1401 aaKnown RBP16.63■□□□□ 0.25
CTR9-201ENST00000361367 MCM2P49736 904 aa16.63■□□□□ 0.25
CTR9-201ENST00000361367 AKAP2Q9Y2D5 859 aa16.63■□□□□ 0.25
CTR9-201ENST00000361367 BICD2Q8TD16 824 aa16.63■□□□□ 0.25
CTR9-201ENST00000361367 SPINK5Q9NQ38 1064 aaPredicted RBP16.63■□□□□ 0.25
CTR9-201ENST00000361367 SMARCA5O60264 1052 aaPredicted RBP16.63■□□□□ 0.25
CTR9-201ENST00000361367 MX1P20591 662 aa16.63■□□□□ 0.25
CTR9-201ENST00000361367 GCC2Q8IWJ2 1684 aa16.63■□□□□ 0.25
CTR9-201ENST00000361367 IDH1O75874 414 aaKnown RBP16.62■□□□□ 0.25
CTR9-201ENST00000361367 GLRX3O76003 335 aaKnown RBP16.62■□□□□ 0.25
CTR9-201ENST00000361367 CWC27Q6UX04 472 aaKnown RBP16.62■□□□□ 0.25
CTR9-201ENST00000361367 NAP1L5Q96NT1 182 aaPredicted RBP16.62■□□□□ 0.25
CTR9-201ENST00000361367 BACH2Q9BYV9 841 aa16.62■□□□□ 0.25
CTR9-201ENST00000361367 ANKRD13DQ6ZTN6 518 aa16.62■□□□□ 0.25
CTR9-201ENST00000361367 ACSBG1Q96GR2 724 aa16.62■□□□□ 0.25
CTR9-201ENST00000361367 LRP2BPQ9P2M1 347 aa16.62■□□□□ 0.25
CTR9-201ENST00000361367 RAI14Q9P0K7 980 aa16.62■□□□□ 0.25
CTR9-201ENST00000361367 UBE3BQ7Z3V4 1068 aa16.62■□□□□ 0.25
CTR9-201ENST00000361367 TCEAL9Q9UHQ7 104 aa16.62■□□□□ 0.25
CTR9-201ENST00000361367 C8orf58Q8NAV2 365 aa16.61■□□□□ 0.25
CTR9-201ENST00000361367 AK7Q96M32 723 aa16.61■□□□□ 0.25
CTR9-201ENST00000361367 CHPF2Q9P2E5 772 aa16.61■□□□□ 0.25
CTR9-201ENST00000361367 IFIT1P09914 478 aaKnown RBP16.61■□□□□ 0.25
CTR9-201ENST00000361367 SIRT1Q96EB6 747 aa16.61■□□□□ 0.25
CTR9-201ENST00000361367 ABCF2Q9UG63 623 aa16.61■□□□□ 0.25
CTR9-201ENST00000361367 PREX2Q70Z35 1606 aa16.61■□□□□ 0.25
CTR9-201ENST00000361367 CWC25Q9NXE8 425 aaPredicted RBP16.61■□□□□ 0.25
CTR9-201ENST00000361367 CYP46A1Q9Y6A2 500 aa16.61■□□□□ 0.25
CTR9-201ENST00000361367 SLAIN2Q9P270 581 aa16.6■□□□□ 0.25
CTR9-201ENST00000361367 PLEKHG3A1L390 1219 aa16.6■□□□□ 0.25
CTR9-201ENST00000361367 XBP1P17861 261 aa16.6■□□□□ 0.25
CTR9-201ENST00000361367 IKQ13123 557 aaPredicted RBP16.6■□□□□ 0.25
CTR9-201ENST00000361367 NFATC2IPQ8NCF5 419 aa16.6■□□□□ 0.25
CTR9-201ENST00000361367 TSPOAP1O95153 1857 aa16.6■□□□□ 0.25
CTR9-201ENST00000361367 KAT6BQ8WYB5 2073 aa16.6■□□□□ 0.25
CTR9-201ENST00000361367 BECN2A8MW95 431 aa16.6■□□□□ 0.25
CTR9-201ENST00000361367 BTG4Q9NY30 223 aa16.6■□□□□ 0.25
CTR9-201ENST00000361367 NPC1L1Q9UHC9 1359 aa16.6■□□□□ 0.25
CTR9-201ENST00000361367 ARHGAP45Q92619 1136 aa16.59■□□□□ 0.25
CTR9-201ENST00000361367 ANKRD18BA2A2Z9 1011 aa16.59■□□□□ 0.25
CTR9-201ENST00000361367 DCAF8L1A6NGE4 600 aa16.59■□□□□ 0.25
CTR9-201ENST00000361367 TPD52L1Q16890 204 aaPredicted RBP16.59■□□□□ 0.25
CTR9-201ENST00000361367 XAGE3Q8WTP9 111 aa16.59■□□□□ 0.25
CTR9-201ENST00000361367 BOLA2Q9H3K6 86 aa16.59■□□□□ 0.25
CTR9-201ENST00000361367 COPS6Q7L5N1 327 aa16.58■□□□□ 0.25
CTR9-201ENST00000361367 STK11IPQ8N1F8 1099 aa16.58■□□□□ 0.25
CTR9-201ENST00000361367 NCBP3Q53F19 620 aaKnown RBP16.58■□□□□ 0.25
CTR9-201ENST00000361367 PLEKHH1Q9ULM0 1364 aa16.58■□□□□ 0.24
CTR9-201ENST00000361367 RBM5P52756 815 aaKnown RBP eCLIP16.58■□□□□ 0.24
CTR9-201ENST00000361367 DCAF5Q96JK2 942 aa16.58■□□□□ 0.24
CTR9-201ENST00000361367 RSPH6AQ9H0K4 717 aa16.58■□□□□ 0.24
CTR9-201ENST00000361367 CCDC8Q9H0W5 538 aaPredicted RBP16.58■□□□□ 0.24
CTR9-201ENST00000361367 GOLGA6L19H0YKK7 550 aa16.58■□□□□ 0.24
CTR9-201ENST00000361367 BRMS1Q9HCU9 246 aa16.58■□□□□ 0.24
CTR9-201ENST00000361367 CAVIN4Q5BKX8 364 aa16.57■□□□□ 0.24
CTR9-201ENST00000361367 CTNNA3Q9UI47 895 aa16.57■□□□□ 0.24
CTR9-201ENST00000361367 SBNO1A3KN83 1393 aa16.57■□□□□ 0.24
CTR9-201ENST00000361367 MAP3K5Q99683 1374 aa16.57■□□□□ 0.24
CTR9-201ENST00000361367 PTPRTO14522 1441 aa16.57■□□□□ 0.24
CTR9-201ENST00000361367 PES1O00541 588 aaKnown RBP16.57■□□□□ 0.24
CTR9-201ENST00000361367 KDM4AO75164 1064 aa16.57■□□□□ 0.24
CTR9-201ENST00000361367 PDCP20941 246 aa16.57■□□□□ 0.24
CTR9-201ENST00000361367 SMARCC1Q92922 1105 aaPredicted RBP16.57■□□□□ 0.24
CTR9-201ENST00000361367 KDM5DQ9BY66 1539 aa16.57■□□□□ 0.24
CTR9-201ENST00000361367 TDO2P48775 406 aa16.57■□□□□ 0.24
CTR9-201ENST00000361367 BCL11BQ9C0K0 894 aaPredicted RBP16.57■□□□□ 0.24
CTR9-201ENST00000361367 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.56■□□□□ 0.24
CTR9-201ENST00000361367 ATP6V1AP38606 617 aa16.56■□□□□ 0.24
CTR9-201ENST00000361367 DDX17Q92841 729 aaKnown RBP16.56■□□□□ 0.24
CTR9-201ENST00000361367 BLOC1S2Q6QNY1 142 aa16.56■□□□□ 0.24
CTR9-201ENST00000361367 PPP1R42Q7Z4L9 355 aa16.56■□□□□ 0.24
CTR9-201ENST00000361367 ANKIB1Q9P2G1 1089 aa16.56■□□□□ 0.24
CTR9-201ENST00000361367 EFCAB6Q5THR3 1501 aa16.56■□□□□ 0.24
CTR9-201ENST00000361367 RFC4P35249 363 aa16.56■□□□□ 0.24
CTR9-201ENST00000361367 HECW2Q9P2P5 1572 aa16.55■□□□□ 0.24
CTR9-201ENST00000361367 LDHAL6AQ6ZMR3 332 aa16.55■□□□□ 0.24
CTR9-201ENST00000361367 CCDC73Q6ZRK6 1079 aa16.55■□□□□ 0.24
CTR9-201ENST00000361367 IL13P35225 146 aa16.55■□□□□ 0.24
CTR9-201ENST00000361367 JARID2Q92833 1246 aaPredicted RBP16.55■□□□□ 0.24
CTR9-201ENST00000361367 AIDAQ96BJ3 306 aa16.55■□□□□ 0.24
CTR9-201ENST00000361367 ANKRD1Q15327 319 aa16.55■□□□□ 0.24
CTR9-201ENST00000361367 RPGRQ92834 1020 aaKnown RBP16.55■□□□□ 0.24
CTR9-201ENST00000361367 ATP2B2Q01814 1243 aa16.55■□□□□ 0.24
CTR9-201ENST00000361367 METP08581 1390 aa16.54■□□□□ 0.24
CTR9-201ENST00000361367 KRT24Q2M2I5 525 aa16.54■□□□□ 0.24
CTR9-201ENST00000361367 CCDC47Q96A33 483 aaKnown RBP16.54■□□□□ 0.24
CTR9-201ENST00000361367 MEIS3Q99687 375 aa16.54■□□□□ 0.24
CTR9-201ENST00000361367 CWC22Q9HCG8 908 aaKnown RBP16.54■□□□□ 0.24
CTR9-201ENST00000361367 PIP4K2AP48426 406 aaPredicted RBP16.53■□□□□ 0.24
CTR9-201ENST00000361367 TSPYL6Q8N831 410 aa16.53■□□□□ 0.24
CTR9-201ENST00000361367 KDM6BO15054 1643 aa16.53■□□□□ 0.24
CTR9-201ENST00000361367 SKAP1Q86WV1 359 aa16.53■□□□□ 0.24
CTR9-201ENST00000361367 HOOK1Q9UJC3 728 aaKnown RBP16.53■□□□□ 0.24
CTR9-201ENST00000361367 RNMTO43148 476 aaKnown RBP16.53■□□□□ 0.24
CTR9-201ENST00000361367 SLC5A1P13866 664 aa16.53■□□□□ 0.24
CTR9-201ENST00000361367 KSR2Q6VAB6 950 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms