RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 BCAR3O75815 825 aa8.5□□□□□ -1.05
RAB5B-201ENST00000360299 LMOD1P29536 600 aaPredicted RBP8.5□□□□□ -1.05
RAB5B-201ENST00000360299 CHAF1AQ13111 956 aaPredicted RBP8.5□□□□□ -1.05
RAB5B-201ENST00000360299 GJD4Q96KN9 370 aaPredicted RBP8.5□□□□□ -1.05
RAB5B-201ENST00000360299 C22orf23Q9BZE7 217 aa8.5□□□□□ -1.05
RAB5B-201ENST00000360299 CHMP5Q9NZZ3 219 aa8.5□□□□□ -1.05
RAB5B-201ENST00000360299 IL16Q14005 1332 aa8.5□□□□□ -1.05
RAB5B-201ENST00000360299 R3HDM1Q15032 1099 aaKnown RBP8.5□□□□□ -1.05
RAB5B-201ENST00000360299 CNTROBQ8N137 903 aa8.5□□□□□ -1.05
RAB5B-201ENST00000360299 FAM184AQ8NB25 1140 aa8.5□□□□□ -1.05
RAB5B-201ENST00000360299 TESK2Q96S53 571 aa8.5□□□□□ -1.05
RAB5B-201ENST00000360299 TMOD2Q9NZR1 351 aa8.5□□□□□ -1.05
RAB5B-201ENST00000360299 COL17A1Q9UMD9 1497 aaPredicted RBP8.5□□□□□ -1.05
RAB5B-201ENST00000360299 GOLGA6L3A6NEY3 463 aa8.5□□□□□ -1.05
RAB5B-201ENST00000360299 SURF6O75683 361 aaKnown RBP8.5□□□□□ -1.05
RAB5B-201ENST00000360299 APPP05067 770 aa8.5□□□□□ -1.05
RAB5B-201ENST00000360299 TRDNQ13061 729 aa8.5□□□□□ -1.05
RAB5B-201ENST00000360299 SLC39A6Q13433 755 aa8.5□□□□□ -1.05
RAB5B-201ENST00000360299 DCTN1Q14203 1278 aa8.5□□□□□ -1.05
RAB5B-201ENST00000360299 ANO2Q9NQ90 1003 aa8.5□□□□□ -1.05
RAB5B-201ENST00000360299 NUCB2P80303 420 aa8.5□□□□□ -1.05
RAB5B-201ENST00000360299 CCDC87Q9NVE4 849 aa8.5□□□□□ -1.05
RAB5B-201ENST00000360299 GJA3Q9Y6H8 435 aa8.5□□□□□ -1.05
RAB5B-201ENST00000360299 DEKP35659 375 aaKnown RBP8.5□□□□□ -1.05
RAB5B-201ENST00000360299 DDX46Q7L014 1031 aaKnown RBP8.5□□□□□ -1.05
RAB5B-201ENST00000360299 KIAA0232Q92628 1395 aa8.49□□□□□ -1.05
RAB5B-201ENST00000360299 PLEKHH1Q9ULM0 1364 aa8.49□□□□□ -1.05
RAB5B-201ENST00000360299 ZBTB7AO95365 584 aa8.49□□□□□ -1.05
RAB5B-201ENST00000360299 MCM2P49736 904 aa8.49□□□□□ -1.05
RAB5B-201ENST00000360299 PDZRN3Q9UPQ7 1066 aa8.49□□□□□ -1.05
RAB5B-201ENST00000360299 ABCA9Q8IUA7 1624 aa8.49□□□□□ -1.05
RAB5B-201ENST00000360299 H3BQV1 296 aa8.49□□□□□ -1.05
RAB5B-201ENST00000360299 AKAP17AQ02040 695 aaKnown RBP8.49□□□□□ -1.05
RAB5B-201ENST00000360299 IFFO2Q5TF58 517 aa8.49□□□□□ -1.05
RAB5B-201ENST00000360299 ZNF408Q9H9D4 720 aa8.49□□□□□ -1.05
RAB5B-201ENST00000360299 GNL3LQ9NVN8 582 aaKnown RBP8.49□□□□□ -1.05
RAB5B-201ENST00000360299 NKTRP30414 1462 aaKnown RBP8.49□□□□□ -1.05
RAB5B-201ENST00000360299 PER1O15534 1290 aaPredicted RBP8.49□□□□□ -1.05
RAB5B-201ENST00000360299 DHX16O60231 1041 aaKnown RBP8.49□□□□□ -1.05
RAB5B-201ENST00000360299 CCDC57Q2TAC2 916 aa8.49□□□□□ -1.05
RAB5B-201ENST00000360299 LAMC1P11047 1609 aa8.48□□□□□ -1.05
RAB5B-201ENST00000360299 DRC7Q8IY82 874 aa8.48□□□□□ -1.05
RAB5B-201ENST00000360299 TBC1D2BQ9UPU7 963 aa8.48□□□□□ -1.05
RAB5B-201ENST00000360299 RNF17Q9BXT8 1623 aaKnown RBP8.48□□□□□ -1.05
RAB5B-201ENST00000360299 ASXL1Q8IXJ9 1541 aa8.48□□□□□ -1.05
RAB5B-201ENST00000360299 KIAA2012Q0VF49 1180 aa8.48□□□□□ -1.05
RAB5B-201ENST00000360299 SF3A1Q15459 793 aaKnown RBP8.48□□□□□ -1.05
RAB5B-201ENST00000360299 TAF7Q15545 349 aaPredicted RBP8.48□□□□□ -1.05
RAB5B-201ENST00000360299 RBM26Q5T8P6 1007 aaKnown RBP8.48□□□□□ -1.05
RAB5B-201ENST00000360299 IP6K1Q92551 441 aa8.48□□□□□ -1.05
RAB5B-201ENST00000360299 PSMA5P28066 241 aa8.48□□□□□ -1.05
RAB5B-201ENST00000360299 AMER1Q5JTC6 1135 aaPredicted RBP8.48□□□□□ -1.05
RAB5B-201ENST00000360299 DEPDC5O75140 1603 aa8.48□□□□□ -1.05
RAB5B-201ENST00000360299 CLTCL1P53675 1640 aa8.48□□□□□ -1.05
RAB5B-201ENST00000360299 EAPPQ56P03 285 aaPredicted RBP8.48□□□□□ -1.05
RAB5B-201ENST00000360299 HOXC9P31274 260 aa8.47□□□□□ -1.05
RAB5B-201ENST00000360299 HSP90AB3PQ58FF7 597 aa8.47□□□□□ -1.05
RAB5B-201ENST00000360299 NIP7Q9Y221 180 aaKnown RBP eCLIP8.47□□□□□ -1.05
RAB5B-201ENST00000360299 MADDQ8WXG6 1647 aa8.47□□□□□ -1.05
RAB5B-201ENST00000360299 INO80Q9ULG1 1556 aaPredicted RBP8.47□□□□□ -1.05
RAB5B-201ENST00000360299 IKQ13123 557 aaPredicted RBP8.47□□□□□ -1.05
RAB5B-201ENST00000360299 PPP1R42Q7Z4L9 355 aa8.47□□□□□ -1.05
RAB5B-201ENST00000360299 NFATC2IPQ8NCF5 419 aa8.47□□□□□ -1.05
RAB5B-201ENST00000360299 THUMPD2Q9BTF0 503 aaKnown RBP8.47□□□□□ -1.05
RAB5B-201ENST00000360299 GLI2P10070 1586 aa8.47□□□□□ -1.05
RAB5B-201ENST00000360299 RARSP54136 660 aaKnown RBP8.47□□□□□ -1.05
RAB5B-201ENST00000360299 NOL8Q76FK4 1167 aaKnown RBP8.47□□□□□ -1.05
RAB5B-201ENST00000360299 ADGRL3Q9HAR2 1447 aa8.47□□□□□ -1.05
RAB5B-201ENST00000360299 SPINK5Q9NQ38 1064 aaPredicted RBP8.47□□□□□ -1.05
RAB5B-201ENST00000360299 ARHGEF40Q8TER5 1519 aa8.46□□□□□ -1.05
RAB5B-201ENST00000360299 PIP4K2AP48426 406 aaPredicted RBP8.46□□□□□ -1.05
RAB5B-201ENST00000360299 FLAD1Q8NFF5 587 aa8.46□□□□□ -1.05
RAB5B-201ENST00000360299 LRRCC1Q9C099 1032 aa8.46□□□□□ -1.05
RAB5B-201ENST00000360299 SPON1Q9HCB6 807 aa8.46□□□□□ -1.05
RAB5B-201ENST00000360299 PARD3Q8TEW0 1356 aa8.46□□□□□ -1.05
RAB5B-201ENST00000360299 ROBO2Q9HCK4 1378 aa8.46□□□□□ -1.05
RAB5B-201ENST00000360299 SPHKAPQ2M3C7 1700 aa8.46□□□□□ -1.05
RAB5B-201ENST00000360299 MROH1Q8NDA8 1641 aa8.46□□□□□ -1.06
RAB5B-201ENST00000360299 MTMR7Q9Y216 660 aa8.46□□□□□ -1.06
RAB5B-201ENST00000360299 POLR3AO14802 1390 aaPredicted RBP8.46□□□□□ -1.06
RAB5B-201ENST00000360299 NPC1L1Q9UHC9 1359 aa8.46□□□□□ -1.06
RAB5B-201ENST00000360299 CEP152O94986 1710 aa8.46□□□□□ -1.06
RAB5B-201ENST00000360299 H0YIN7 160 aa8.45□□□□□ -1.06
RAB5B-201ENST00000360299 CPLX1O14810 134 aa8.45□□□□□ -1.06
RAB5B-201ENST00000360299 DUSP27Q5VZP5 1158 aa8.45□□□□□ -1.06
RAB5B-201ENST00000360299 DZIP3Q86Y13 1208 aaKnown RBP8.45□□□□□ -1.06
RAB5B-201ENST00000360299 GZF1Q9H116 711 aaPredicted RBP8.45□□□□□ -1.06
RAB5B-201ENST00000360299 DDX49Q9Y6V7 483 aaKnown RBP8.45□□□□□ -1.06
RAB5B-201ENST00000360299 ATP2B2Q01814 1243 aa8.45□□□□□ -1.06
RAB5B-201ENST00000360299 TRIM29Q14134 588 aa8.45□□□□□ -1.06
RAB5B-201ENST00000360299 MYD88Q99836 296 aa8.45□□□□□ -1.06
RAB5B-201ENST00000360299 ABCC3O15438 1527 aa8.45□□□□□ -1.06
RAB5B-201ENST00000360299 PIK3R4Q99570 1358 aa8.45□□□□□ -1.06
RAB5B-201ENST00000360299 MYCNP04198 464 aaPredicted RBP8.45□□□□□ -1.06
RAB5B-201ENST00000360299 SNRPA1P09661 255 aaKnown RBP8.45□□□□□ -1.06
RAB5B-201ENST00000360299 RABEP1Q15276 862 aa8.45□□□□□ -1.06
RAB5B-201ENST00000360299 TPTE2Q6XPS3 522 aa8.45□□□□□ -1.06
RAB5B-201ENST00000360299 FOXD4L1Q9NU39 408 aa8.45□□□□□ -1.06
RAB5B-201ENST00000360299 PTPRTO14522 1441 aa8.45□□□□□ -1.06
RAB5B-201ENST00000360299 VWDEQ8N2E2 1590 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms