RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 IFFO1Q0D2I5 559 aa13.37□□□□□ -0.27
SPTBN1-202ENST00000356805 SLC4A2P04920 1241 aa13.37□□□□□ -0.27
SPTBN1-202ENST00000356805 PPP4R3BQ5MIZ7 849 aa13.37□□□□□ -0.27
SPTBN1-202ENST00000356805 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.37□□□□□ -0.27
SPTBN1-202ENST00000356805 KRT32Q14532 448 aa13.37□□□□□ -0.27
SPTBN1-202ENST00000356805 SERPINA10Q9UK55 444 aa13.37□□□□□ -0.27
SPTBN1-202ENST00000356805 CAMK4Q16566 473 aa13.36□□□□□ -0.27
SPTBN1-202ENST00000356805 SPA17Q15506 151 aa13.36□□□□□ -0.27
SPTBN1-202ENST00000356805 CFAP100Q494V2 611 aa13.36□□□□□ -0.27
SPTBN1-202ENST00000356805 PNISRQ8TF01 805 aaKnown RBP13.36□□□□□ -0.27
SPTBN1-202ENST00000356805 KIF5CO60282 957 aa13.36□□□□□ -0.27
SPTBN1-202ENST00000356805 SYCE3A1L190 88 aa13.36□□□□□ -0.27
SPTBN1-202ENST00000356805 CCDC85AQ96PX6 553 aaPredicted RBP13.35□□□□□ -0.27
SPTBN1-202ENST00000356805 HOMER2Q9NSB8 354 aa13.35□□□□□ -0.27
SPTBN1-202ENST00000356805 MTHFSP49914 203 aa13.35□□□□□ -0.27
SPTBN1-202ENST00000356805 MVPQ14764 893 aaKnown RBP13.35□□□□□ -0.27
SPTBN1-202ENST00000356805 HDGFL1Q5TGJ6 251 aa13.35□□□□□ -0.27
SPTBN1-202ENST00000356805 TMEM132EQ6IEE7 984 aa13.35□□□□□ -0.27
SPTBN1-202ENST00000356805 TMX1Q9H3N1 280 aa13.35□□□□□ -0.27
SPTBN1-202ENST00000356805 LIG1P18858 919 aa13.35□□□□□ -0.27
SPTBN1-202ENST00000356805 SMC1AQ14683 1233 aaKnown RBP13.35□□□□□ -0.27
SPTBN1-202ENST00000356805 TWISTNBQ3B726 338 aaPredicted RBP13.35□□□□□ -0.27
SPTBN1-202ENST00000356805 RRBP1Q9P2E9 1410 aaKnown RBP13.35□□□□□ -0.27
SPTBN1-202ENST00000356805 TTLL12Q14166 644 aaPredicted RBP13.35□□□□□ -0.27
SPTBN1-202ENST00000356805 PDRG1Q9NUG6 133 aa13.35□□□□□ -0.27
SPTBN1-202ENST00000356805 KLHL40Q2TBA0 621 aa13.35□□□□□ -0.27
SPTBN1-202ENST00000356805 KLHL10Q6JEL2 608 aa13.35□□□□□ -0.27
SPTBN1-202ENST00000356805 SMAP1Q8IYB5 467 aaPredicted RBP13.35□□□□□ -0.27
SPTBN1-202ENST00000356805 GTF2A1P52655 376 aaPredicted RBP13.35□□□□□ -0.27
SPTBN1-202ENST00000356805 WDR78Q5VTH9 848 aa13.35□□□□□ -0.27
SPTBN1-202ENST00000356805 LARP1Q6PKG0 1096 aaKnown RBP13.35□□□□□ -0.27
SPTBN1-202ENST00000356805 ANO10Q9NW15 660 aa13.35□□□□□ -0.27
SPTBN1-202ENST00000356805 CTNNA2P26232 953 aa13.35□□□□□ -0.27
SPTBN1-202ENST00000356805 PIP4K2BP78356 416 aa13.35□□□□□ -0.27
SPTBN1-202ENST00000356805 HOOK3Q86VS8 718 aa13.35□□□□□ -0.27
SPTBN1-202ENST00000356805 FERMT2Q96AC1 680 aa13.35□□□□□ -0.27
SPTBN1-202ENST00000356805 CEP131Q9UPN4 1083 aa13.35□□□□□ -0.27
SPTBN1-202ENST00000356805 WIZO95785 1651 aa13.34□□□□□ -0.27
SPTBN1-202ENST00000356805 CA8P35219 290 aa13.34□□□□□ -0.27
SPTBN1-202ENST00000356805 CACNA2D4Q7Z3S7 1137 aa13.34□□□□□ -0.27
SPTBN1-202ENST00000356805 PLCD3Q8N3E9 789 aa13.34□□□□□ -0.27
SPTBN1-202ENST00000356805 FEZ1Q99689 392 aa13.34□□□□□ -0.27
SPTBN1-202ENST00000356805 JAKMIP1Q96N16 626 aaKnown RBP13.34□□□□□ -0.27
SPTBN1-202ENST00000356805 ADAMTS8Q9UP79 889 aa13.34□□□□□ -0.27
SPTBN1-202ENST00000356805 CCDC171Q6TFL3 1326 aa13.34□□□□□ -0.27
SPTBN1-202ENST00000356805 BBXQ8WY36 941 aaPredicted RBP13.34□□□□□ -0.27
SPTBN1-202ENST00000356805 BLOC1S2Q6QNY1 142 aa13.34□□□□□ -0.27
SPTBN1-202ENST00000356805 CHD1LQ86WJ1 897 aa13.34□□□□□ -0.27
SPTBN1-202ENST00000356805 DNAAF4Q8WXU2 420 aa13.34□□□□□ -0.27
SPTBN1-202ENST00000356805 TSG101Q99816 390 aa13.34□□□□□ -0.27
SPTBN1-202ENST00000356805 CCDC94Q9BW85 323 aaPredicted RBP13.33□□□□□ -0.27
SPTBN1-202ENST00000356805 PRKAR2BP31323 418 aa13.33□□□□□ -0.28
SPTBN1-202ENST00000356805 JPH4Q96JJ6 628 aa13.33□□□□□ -0.28
SPTBN1-202ENST00000356805 ABCF2Q9UG63 623 aa13.33□□□□□ -0.28
SPTBN1-202ENST00000356805 IDH1O75874 414 aaKnown RBP13.33□□□□□ -0.28
SPTBN1-202ENST00000356805 GCOM1H8Y6P7 765 aaPredicted RBP13.33□□□□□ -0.28
SPTBN1-202ENST00000356805 MYZAPP0CAP1 466 aa13.33□□□□□ -0.28
SPTBN1-202ENST00000356805 SRRTQ9BXP5 876 aaKnown RBP13.33□□□□□ -0.28
SPTBN1-202ENST00000356805 CCT4P50991 539 aaKnown RBP13.33□□□□□ -0.28
SPTBN1-202ENST00000356805 TMCO5BA8MYB1 307 aa13.32□□□□□ -0.28
SPTBN1-202ENST00000356805 TUBBP07437 444 aa13.32□□□□□ -0.28
SPTBN1-202ENST00000356805 TERF1P54274 439 aa13.32□□□□□ -0.28
SPTBN1-202ENST00000356805 RNF187Q5TA31 235 aaPredicted RBP13.32□□□□□ -0.28
SPTBN1-202ENST00000356805 CASTP20810 708 aaKnown RBP13.32□□□□□ -0.28
SPTBN1-202ENST00000356805 BCAR3O75815 825 aa13.32□□□□□ -0.28
SPTBN1-202ENST00000356805 WASF1Q92558 559 aa13.32□□□□□ -0.28
SPTBN1-202ENST00000356805 SMARCC1Q92922 1105 aaPredicted RBP13.32□□□□□ -0.28
SPTBN1-202ENST00000356805 TMOD2Q9NZR1 351 aa13.32□□□□□ -0.28
SPTBN1-202ENST00000356805 MRPS9P82933 396 aaKnown RBP13.32□□□□□ -0.28
SPTBN1-202ENST00000356805 ATF7IPQ6VMQ6 1270 aa13.32□□□□□ -0.28
SPTBN1-202ENST00000356805 CRACR2BQ8N4Y2 399 aaPredicted RBP13.32□□□□□ -0.28
SPTBN1-202ENST00000356805 MNAT1P51948 309 aa13.32□□□□□ -0.28
SPTBN1-202ENST00000356805 FKBP15Q5T1M5 1219 aa13.32□□□□□ -0.28
SPTBN1-202ENST00000356805 SH2B1Q9NRF2 756 aaPredicted RBP13.32□□□□□ -0.28
SPTBN1-202ENST00000356805 SPATA24Q86W54 205 aa13.32□□□□□ -0.28
SPTBN1-202ENST00000356805 PRDM10Q9NQV6 1147 aa13.32□□□□□ -0.28
SPTBN1-202ENST00000356805 POLR3DP05423 398 aaPredicted RBP13.31□□□□□ -0.28
SPTBN1-202ENST00000356805 ZHX1Q9UKY1 873 aaPredicted RBP13.31□□□□□ -0.28
SPTBN1-202ENST00000356805 KIF21BO75037 1637 aa13.31□□□□□ -0.28
SPTBN1-202ENST00000356805 BTBD11A6QL63 1104 aa13.31□□□□□ -0.28
SPTBN1-202ENST00000356805 AIDAQ96BJ3 306 aa13.31□□□□□ -0.28
SPTBN1-202ENST00000356805 V9GYY5 206 aaPredicted RBP13.31□□□□□ -0.28
SPTBN1-202ENST00000356805 MINDY4BA8MYZ0 360 aa13.31□□□□□ -0.28
SPTBN1-202ENST00000356805 XPCQ01831 940 aaPredicted RBP13.31□□□□□ -0.28
SPTBN1-202ENST00000356805 GIGYF2Q6Y7W6 1299 aaKnown RBP13.31□□□□□ -0.28
SPTBN1-202ENST00000356805 PABPN1LA6NDY0 278 aaKnown RBP13.31□□□□□ -0.28
SPTBN1-202ENST00000356805 IGHMBP2P38935 993 aaKnown RBP13.31□□□□□ -0.28
SPTBN1-202ENST00000356805 EXOSC9Q06265 439 aaKnown RBP13.31□□□□□ -0.28
SPTBN1-202ENST00000356805 TRMT1LQ7Z2T5 733 aaKnown RBP13.31□□□□□ -0.28
SPTBN1-202ENST00000356805 TSR2Q969E8 191 aaKnown RBP13.31□□□□□ -0.28
SPTBN1-202ENST00000356805 SPECC1LQ69YQ0 1117 aa13.31□□□□□ -0.28
SPTBN1-202ENST00000356805 TCP11L2Q8N4U5 519 aa13.31□□□□□ -0.28
SPTBN1-202ENST00000356805 DDX19AQ9NUU7 478 aaKnown RBP13.31□□□□□ -0.28
SPTBN1-202ENST00000356805 ANKIB1Q9P2G1 1089 aa13.31□□□□□ -0.28
SPTBN1-202ENST00000356805 FYCO1Q9BQS8 1478 aa13.3□□□□□ -0.28
SPTBN1-202ENST00000356805 FAM69CQ0P6D2 419 aa13.3□□□□□ -0.28
SPTBN1-202ENST00000356805 RBM25P49756 843 aaKnown RBP13.3□□□□□ -0.28
SPTBN1-202ENST00000356805 VPS36Q86VN1 386 aa13.3□□□□□ -0.28
SPTBN1-202ENST00000356805 MKNK2Q9HBH9 465 aa13.3□□□□□ -0.28
SPTBN1-202ENST00000356805 GTF2F1P35269 517 aaKnown RBP eCLIP13.3□□□□□ -0.287e-6■■■■□ 21.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms