RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 C1orf115Q9H7X2 142 aa32.44■■■□□ 2.78
CLK2-201ENST00000355560 PLEKHG2Q9H7P9 1386 aa32.44■■■□□ 2.78
CLK2-201ENST00000355560 SIPA1L3O60292 1781 aaPredicted RBP32.44■■■□□ 2.78
CLK2-201ENST00000355560 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.44■■■□□ 2.78
CLK2-201ENST00000355560 COL5A2P05997 1499 aaPredicted RBP32.42■■■□□ 2.78
CLK2-201ENST00000355560 WDR17Q8IZU2 1322 aa32.42■■■□□ 2.78
CLK2-201ENST00000355560 KCNQ3O43525 872 aa32.42■■■□□ 2.78
CLK2-201ENST00000355560 HDGFL1Q5TGJ6 251 aa32.42■■■□□ 2.78
CLK2-201ENST00000355560 PKD1L3Q7Z443 1732 aa32.41■■■□□ 2.78
CLK2-201ENST00000355560 ROBO1Q9Y6N7 1651 aa32.41■■■□□ 2.78
CLK2-201ENST00000355560 SCN11AQ9UI33 1791 aa32.4■■■□□ 2.78
CLK2-201ENST00000355560 PHKG2P15735 406 aa32.39■■■□□ 2.78
CLK2-201ENST00000355560 FLIIQ13045 1269 aa32.39■■■□□ 2.78
CLK2-201ENST00000355560 SMC5Q8IY18 1101 aa32.39■■■□□ 2.78
CLK2-201ENST00000355560 LTBP4Q8N2S1 1624 aa32.39■■■□□ 2.78
CLK2-201ENST00000355560 HOXB7P09629 217 aa32.39■■■□□ 2.78
CLK2-201ENST00000355560 KDM6AO15550 1401 aaPredicted RBP32.38■■■□□ 2.77
CLK2-201ENST00000355560 FAM161AQ3B820 660 aa32.38■■■□□ 2.77
CLK2-201ENST00000355560 F6X3S4 739 aa32.37■■■□□ 2.77
CLK2-201ENST00000355560 TOM1L2Q6ZVM7 507 aa32.37■■■□□ 2.77
CLK2-201ENST00000355560 IFNL2Q8IZJ0 200 aa32.36■■■□□ 2.77
CLK2-201ENST00000355560 FKBP5Q13451 457 aaPredicted RBP32.36■■■□□ 2.77
CLK2-201ENST00000355560 SLC4A10Q6U841 1118 aa32.35■■■□□ 2.77
CLK2-201ENST00000355560 C8orf34Q49A92 452 aa32.35■■■□□ 2.77
CLK2-201ENST00000355560 PARP4Q9UKK3 1724 aaKnown RBP32.34■■■□□ 2.77
CLK2-201ENST00000355560 EIF2S2P20042 333 aaKnown RBP32.34■■■□□ 2.77
CLK2-201ENST00000355560 CYP27B1O15528 508 aa32.32■■■□□ 2.76
CLK2-201ENST00000355560 CCT4P50991 539 aaKnown RBP32.32■■■□□ 2.76
CLK2-201ENST00000355560 AHDC1Q5TGY3 1603 aaPredicted RBP32.32■■■□□ 2.76
CLK2-201ENST00000355560 SIRT2Q8IXJ6 389 aa32.32■■■□□ 2.76
CLK2-201ENST00000355560 CHMP4AQ9BY43 222 aa32.32■■■□□ 2.76
CLK2-201ENST00000355560 SLC52A2Q9HAB3 445 aa32.31■■■□□ 2.76
CLK2-201ENST00000355560 MEIS3Q99687 375 aa32.3■■■□□ 2.76
CLK2-201ENST00000355560 STRN4Q9NRL3 753 aa32.29■■■□□ 2.76
CLK2-201ENST00000355560 DCAF5Q96JK2 942 aa32.29■■■□□ 2.76
CLK2-201ENST00000355560 HEG1Q9ULI3 1381 aa32.29■■■□□ 2.76
CLK2-201ENST00000355560 ANP32AP39687 249 aaKnown RBP32.28■■■□□ 2.76
CLK2-201ENST00000355560 CHPF2Q9P2E5 772 aa32.28■■■□□ 2.76
CLK2-201ENST00000355560 ATP10DQ9P241 1426 aa32.27■■■□□ 2.76
CLK2-201ENST00000355560 PHAXQ9H814 394 aaKnown RBP32.27■■■□□ 2.76
CLK2-201ENST00000355560 MRC1P22897 1456 aa32.27■■■□□ 2.76
CLK2-201ENST00000355560 GIGYF1O75420 1035 aaPredicted RBP32.27■■■□□ 2.76
CLK2-201ENST00000355560 GCC1Q96CN9 775 aa32.27■■■□□ 2.76
CLK2-201ENST00000355560 N4BP2Q86UW6 1770 aaPredicted RBP32.26■■■□□ 2.76
CLK2-201ENST00000355560 CARD10Q9BWT7 1032 aa32.26■■■□□ 2.76
CLK2-201ENST00000355560 HSP90AB1P08238 724 aaKnown RBP32.26■■■□□ 2.75
CLK2-201ENST00000355560 EVA1CP58658 441 aa32.26■■■□□ 2.75
CLK2-201ENST00000355560 NUCB1Q02818 461 aa32.26■■■□□ 2.75
CLK2-201ENST00000355560 LARP1Q6PKG0 1096 aaKnown RBP32.26■■■□□ 2.75
CLK2-201ENST00000355560 NFATC2IPQ8NCF5 419 aa32.26■■■□□ 2.75
CLK2-201ENST00000355560 PXDNLA1KZ92 1463 aa32.25■■■□□ 2.75
CLK2-201ENST00000355560 ZNF790Q6PG37 636 aa32.24■■■□□ 2.75
CLK2-201ENST00000355560 NPM2Q86SE8 214 aaKnown RBP32.23■■■□□ 2.75
CLK2-201ENST00000355560 PCDH11XQ9BZA7 1347 aa32.23■■■□□ 2.75
CLK2-201ENST00000355560 PCDH11YQ9BZA8 1340 aa32.23■■■□□ 2.75
CLK2-201ENST00000355560 SLC39A6Q13433 755 aa32.23■■■□□ 2.75
CLK2-201ENST00000355560 IL2RBP14784 551 aa32.22■■■□□ 2.75
CLK2-201ENST00000355560 COL22A1Q8NFW1 1626 aaPredicted RBP32.22■■■□□ 2.75
CLK2-201ENST00000355560 ANKRD44Q8N8A2 993 aa32.21■■■□□ 2.75
CLK2-201ENST00000355560 ZCRB1Q8TBF4 217 aaKnown RBP32.21■■■□□ 2.75
CLK2-201ENST00000355560 PRAMEF22A3QJZ6 481 aa32.21■■■□□ 2.75
CLK2-201ENST00000355560 CEP85Q6P2H3 762 aa32.21■■■□□ 2.75
CLK2-201ENST00000355560 CHD1LQ86WJ1 897 aa32.21■■■□□ 2.75
CLK2-201ENST00000355560 RPAP2Q8IXW5 612 aaPredicted RBP32.21■■■□□ 2.75
CLK2-201ENST00000355560 DBF4Q9UBU7 674 aaPredicted RBP32.21■■■□□ 2.75
CLK2-201ENST00000355560 LNPKQ9C0E8 428 aa32.2■■■□□ 2.75
CLK2-201ENST00000355560 ANXA1P04083 346 aa32.19■■■□□ 2.74
CLK2-201ENST00000355560 BTG4Q9NY30 223 aa32.18■■■□□ 2.74
CLK2-201ENST00000355560 COL14A1Q05707 1796 aaKnown RBP32.18■■■□□ 2.74
CLK2-201ENST00000355560 ANKRD45Q5TZF3 282 aa32.17■■■□□ 2.74
CLK2-201ENST00000355560 C5P01031 1676 aa32.17■■■□□ 2.74
CLK2-201ENST00000355560 SHANK3Q9BYB0 1731 aa32.16■■■□□ 2.74
CLK2-201ENST00000355560 MSH5O43196 834 aa32.16■■■□□ 2.74
CLK2-201ENST00000355560 CABP4P57796 275 aa32.16■■■□□ 2.74
CLK2-201ENST00000355560 COL16A1Q07092 1604 aaPredicted RBP32.14■■■□□ 2.74
CLK2-201ENST00000355560 USP35Q9P2H5 1018 aa32.14■■■□□ 2.74
CLK2-201ENST00000355560 TTC5Q8N0Z6 440 aa32.14■■■□□ 2.73
CLK2-201ENST00000355560 DCTPP1Q9H773 170 aa32.14■■■□□ 2.73
CLK2-201ENST00000355560 PHLPP1O60346 1717 aa32.13■■■□□ 2.73
CLK2-201ENST00000355560 GNAI2P04899 355 aa32.13■■■□□ 2.73
CLK2-201ENST00000355560 GNAI3P08754 354 aa32.13■■■□□ 2.73
CLK2-201ENST00000355560 PROSER3Q2NL68 480 aa32.13■■■□□ 2.73
CLK2-201ENST00000355560 ZNF496Q96IT1 587 aaPredicted RBP32.12■■■□□ 2.73
CLK2-201ENST00000355560 PI4KAP2A4QPH2 592 aa32.12■■■□□ 2.73
CLK2-201ENST00000355560 PI4KAP1Q8N8J0 262 aa32.12■■■□□ 2.73
CLK2-201ENST00000355560 DNAAF4Q8WXU2 420 aa32.11■■■□□ 2.73
CLK2-201ENST00000355560 ADCY9O60503 1353 aa32.1■■■□□ 2.73
CLK2-201ENST00000355560 SRCIN1Q9C0H9 1055 aa32.09■■■□□ 2.73
CLK2-201ENST00000355560 DDX54Q8TDD1 881 aaKnown RBP32.09■■■□□ 2.73
CLK2-201ENST00000355560 IPO9Q96P70 1041 aaKnown RBP32.09■■■□□ 2.73
CLK2-201ENST00000355560 HYPKQ9NX55 129 aa32.09■■■□□ 2.73
CLK2-201ENST00000355560 HMMRO75330 724 aa32.08■■■□□ 2.73
CLK2-201ENST00000355560 NKX1-1Q15270 411 aaPredicted RBP32.08■■■□□ 2.73
CLK2-201ENST00000355560 USP44Q9H0E7 712 aa32.08■■■□□ 2.73
CLK2-201ENST00000355560 DDX21Q9NR30 783 aaKnown RBP eCLIP32.08■■■□□ 2.73
CLK2-201ENST00000355560 FMNL2Q96PY5 1086 aa32.07■■■□□ 2.72
CLK2-201ENST00000355560 ERVV-2B6SEH9 535 aa32.05■■■□□ 2.72
CLK2-201ENST00000355560 SNRPA1P09661 255 aaKnown RBP32.05■■■□□ 2.72
CLK2-201ENST00000355560 BEND3Q5T5X7 828 aa32.05■■■□□ 2.72
CLK2-201ENST00000355560 PDIA6Q15084 440 aa32.05■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms