RNA–Protein interactions for RNA: ENST00000355485.6

VANGL1-202, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 8,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-202ENST00000355485 SMTNL1A8MU46 457 aa9.17□□□□□ -0.94
VANGL1-202ENST00000355485 ATF3P18847 181 aa9.17□□□□□ -0.94
VANGL1-202ENST00000355485 SSX2IPQ9Y2D8 614 aa9.17□□□□□ -0.94
VANGL1-202ENST00000355485 RABEP2Q9H5N1 569 aa9.17□□□□□ -0.94
VANGL1-202ENST00000355485 CNPY2Q9Y2B0 182 aa9.17□□□□□ -0.94
VANGL1-202ENST00000355485 TDRD9Q8NDG6 1382 aaKnown RBP9.17□□□□□ -0.94
VANGL1-202ENST00000355485 PTGS1P23219 599 aa9.17□□□□□ -0.94
VANGL1-202ENST00000355485 PPP4R3AQ6IN85 833 aa9.17□□□□□ -0.94
VANGL1-202ENST00000355485 MYOM3Q5VTT5 1437 aa9.17□□□□□ -0.94
VANGL1-202ENST00000355485 EVC2Q86UK5 1308 aa9.17□□□□□ -0.94
VANGL1-202ENST00000355485 GOPCQ9HD26 462 aa9.16□□□□□ -0.94
VANGL1-202ENST00000355485 TOP1P11387 765 aaKnown RBP9.16□□□□□ -0.94
VANGL1-202ENST00000355485 PRKAR2BP31323 418 aa9.16□□□□□ -0.94
VANGL1-202ENST00000355485 MCM6Q14566 821 aa9.16□□□□□ -0.94
VANGL1-202ENST00000355485 FGD6Q6ZV73 1430 aa9.16□□□□□ -0.94
VANGL1-202ENST00000355485 PAXBP1Q9Y5B6 917 aa9.16□□□□□ -0.94
VANGL1-202ENST00000355485 DDX58O95786 925 aaKnown RBP9.16□□□□□ -0.94
VANGL1-202ENST00000355485 USP48Q86UV5 1035 aa9.16□□□□□ -0.94
VANGL1-202ENST00000355485 RASSF4Q9H2L5 321 aa9.16□□□□□ -0.94
VANGL1-202ENST00000355485 HMGB1P1B2RPK0 211 aaPredicted RBP9.16□□□□□ -0.94
VANGL1-202ENST00000355485 RIOK3O14730 519 aaKnown RBP9.16□□□□□ -0.94
VANGL1-202ENST00000355485 SLC4A2P04920 1241 aa9.16□□□□□ -0.94
VANGL1-202ENST00000355485 PDCP20941 246 aa9.16□□□□□ -0.94
VANGL1-202ENST00000355485 MATR3P43243 847 aaKnown RBP eCLIP9.16□□□□□ -0.94
VANGL1-202ENST00000355485 PRPF40BQ6NWY9 871 aaKnown RBP9.16□□□□□ -0.94
VANGL1-202ENST00000355485 KIF5CO60282 957 aa9.16□□□□□ -0.94
VANGL1-202ENST00000355485 GNAI2P04899 355 aa9.16□□□□□ -0.94
VANGL1-202ENST00000355485 PPARDQ03181 441 aa9.16□□□□□ -0.94
VANGL1-202ENST00000355485 RIC3Q7Z5B4 369 aa9.16□□□□□ -0.94
VANGL1-202ENST00000355485 GBP3Q9H0R5 595 aa9.16□□□□□ -0.94
VANGL1-202ENST00000355485 ZSCAN12O43309 604 aa9.15□□□□□ -0.94
VANGL1-202ENST00000355485 DHX8Q14562 1220 aaKnown RBP9.15□□□□□ -0.94
VANGL1-202ENST00000355485 KLHL10Q6JEL2 608 aa9.15□□□□□ -0.94
VANGL1-202ENST00000355485 TBC1D9Q6ZT07 1266 aa9.15□□□□□ -0.94
VANGL1-202ENST00000355485 GAS2L2Q8NHY3 880 aa9.15□□□□□ -0.94
VANGL1-202ENST00000355485 GJB2P29033 226 aa9.15□□□□□ -0.94
VANGL1-202ENST00000355485 DNAI1Q9UI46 699 aa9.15□□□□□ -0.94
VANGL1-202ENST00000355485 SLU7O95391 586 aaKnown RBP9.15□□□□□ -0.94
VANGL1-202ENST00000355485 TEFQ10587 303 aa9.15□□□□□ -0.94
VANGL1-202ENST00000355485 PIBF1Q8WXW3 757 aa9.15□□□□□ -0.94
VANGL1-202ENST00000355485 PHACTR2O75167 634 aa9.15□□□□□ -0.94
VANGL1-202ENST00000355485 SSBP05455 408 aaKnown RBP eCLIP9.15□□□□□ -0.94
VANGL1-202ENST00000355485 CAPN2P17655 700 aa9.15□□□□□ -0.94
VANGL1-202ENST00000355485 HSP90AA4PQ58FG1 418 aa9.15□□□□□ -0.94
VANGL1-202ENST00000355485 ERC1Q8IUD2 1116 aa9.15□□□□□ -0.94
VANGL1-202ENST00000355485 UVSSAQ2YD98 709 aa9.15□□□□□ -0.95
VANGL1-202ENST00000355485 TMEM132EQ6IEE7 984 aa9.15□□□□□ -0.95
VANGL1-202ENST00000355485 CEP57Q86XR8 500 aa9.15□□□□□ -0.95
VANGL1-202ENST00000355485 ZNF397Q8NF99 534 aaPredicted RBP9.15□□□□□ -0.95
VANGL1-202ENST00000355485 DACH1Q9UI36 760 aa9.15□□□□□ -0.95
VANGL1-202ENST00000355485 TNNQ9UQP3 1299 aa9.15□□□□□ -0.95
VANGL1-202ENST00000355485 FYCO1Q9BQS8 1478 aa9.15□□□□□ -0.95
VANGL1-202ENST00000355485 POTEJP0CG39 1038 aa9.14□□□□□ -0.95
VANGL1-202ENST00000355485 CA8P35219 290 aa9.14□□□□□ -0.95
VANGL1-202ENST00000355485 ANO6Q4KMQ2 910 aa9.14□□□□□ -0.95
VANGL1-202ENST00000355485 TSHZ3Q63HK5 1081 aa9.14□□□□□ -0.95
VANGL1-202ENST00000355485 CCDC12Q8WUD4 166 aaPredicted RBP9.14□□□□□ -0.95
VANGL1-202ENST00000355485 INCENPQ9NQS7 918 aa9.14□□□□□ -0.95
VANGL1-202ENST00000355485 ANO10Q9NW15 660 aa9.14□□□□□ -0.95
VANGL1-202ENST00000355485 EFCAB5A4FU69 1503 aa9.14□□□□□ -0.95
VANGL1-202ENST00000355485 MICALCLQ6ZW33 695 aa9.14□□□□□ -0.95
VANGL1-202ENST00000355485 LUC7LQ9NQ29 371 aaKnown RBP9.14□□□□□ -0.95
VANGL1-202ENST00000355485 KRT18P05783 430 aaKnown RBP9.14□□□□□ -0.95
VANGL1-202ENST00000355485 SCLT1Q96NL6 688 aa9.14□□□□□ -0.95
VANGL1-202ENST00000355485 EXOC6BQ9Y2D4 811 aa9.14□□□□□ -0.95
VANGL1-202ENST00000355485 GNG11P61952 73 aa9.14□□□□□ -0.95
VANGL1-202ENST00000355485 BLOC1S2Q6QNY1 142 aa9.14□□□□□ -0.95
VANGL1-202ENST00000355485 SYT10Q6XYQ8 523 aa9.14□□□□□ -0.95
VANGL1-202ENST00000355485 SCAPERQ9BY12 1400 aa9.14□□□□□ -0.95
VANGL1-202ENST00000355485 TTLL12Q14166 644 aaPredicted RBP9.14□□□□□ -0.95
VANGL1-202ENST00000355485 MAP3K1Q13233 1512 aa9.13□□□□□ -0.95
VANGL1-202ENST00000355485 KIF2AO00139 706 aaPredicted RBP9.13□□□□□ -0.95
VANGL1-202ENST00000355485 DNAJC21Q5F1R6 531 aaKnown RBP9.13□□□□□ -0.95
VANGL1-202ENST00000355485 PUF60Q9UHX1 559 aaKnown RBP9.13□□□□□ -0.95
VANGL1-202ENST00000355485 COMMD10Q9Y6G5 202 aa9.13□□□□□ -0.95
VANGL1-202ENST00000355485 CASKIN1Q8WXD9 1431 aa9.13□□□□□ -0.95
VANGL1-202ENST00000355485 LRRC9Q6ZRR7 1453 aa9.13□□□□□ -0.95
VANGL1-202ENST00000355485 TXLNAP40222 546 aa9.13□□□□□ -0.95
VANGL1-202ENST00000355485 ANAPC15P60006 121 aa9.13□□□□□ -0.95
VANGL1-202ENST00000355485 CCDC178Q5BJE1 867 aa9.13□□□□□ -0.95
VANGL1-202ENST00000355485 MPHOSPH6Q99547 160 aaKnown RBP9.13□□□□□ -0.95
VANGL1-202ENST00000355485 RGS22Q8NE09 1264 aa9.13□□□□□ -0.95
VANGL1-202ENST00000355485 ZSCAN31Q96LW9 406 aaPredicted RBP9.13□□□□□ -0.95
VANGL1-202ENST00000355485 MAATS1Q7Z4T9 603 aa9.13□□□□□ -0.95
VANGL1-202ENST00000355485 GIGYF2Q6Y7W6 1299 aaKnown RBP9.13□□□□□ -0.95
VANGL1-202ENST00000355485 ZHX3Q9H4I2 956 aa9.13□□□□□ -0.95
VANGL1-202ENST00000355485 PPP6R1Q9UPN7 881 aa9.13□□□□□ -0.95
VANGL1-202ENST00000355485 RARSP54136 660 aaKnown RBP9.13□□□□□ -0.95
VANGL1-202ENST00000355485 MRPS9P82933 396 aaKnown RBP9.13□□□□□ -0.95
VANGL1-202ENST00000355485 NUTM2GQ5VZR2 741 aa9.12□□□□□ -0.95
VANGL1-202ENST00000355485 EIF5P55010 431 aaKnown RBP9.12□□□□□ -0.95
VANGL1-202ENST00000355485 GNL3LQ9NVN8 582 aaKnown RBP9.12□□□□□ -0.95
VANGL1-202ENST00000355485 TMOD2Q9NZR1 351 aa9.12□□□□□ -0.95
VANGL1-202ENST00000355485 SKILP12757 684 aa9.12□□□□□ -0.95
VANGL1-202ENST00000355485 NUP133Q8WUM0 1156 aa9.12□□□□□ -0.95
VANGL1-202ENST00000355485 A0A1B0GUL7 405 aa9.12□□□□□ -0.95
VANGL1-202ENST00000355485 THUMPD2Q9BTF0 503 aaKnown RBP9.12□□□□□ -0.95
VANGL1-202ENST00000355485 ZWINTO95229 277 aa9.12□□□□□ -0.95
VANGL1-202ENST00000355485 DNAJC25Q9H1X3 360 aa9.12□□□□□ -0.95
VANGL1-202ENST00000355485 MYCNP04198 464 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms