RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 IFIT5Q13325 482 aaKnown RBP21.13■□□□□ 0.97
COL18A1-202ENST00000355480 NME9Q86XW9 330 aa21.13■□□□□ 0.97
COL18A1-202ENST00000355480 MTERF4Q7Z6M4 381 aaKnown RBP21.12■□□□□ 0.97
COL18A1-202ENST00000355480 EIF5P55010 431 aaKnown RBP21.12■□□□□ 0.97
COL18A1-202ENST00000355480 NAPBQ9H115 298 aa21.12■□□□□ 0.97
COL18A1-202ENST00000355480 TRMT112Q9UI30 125 aaKnown RBP21.12■□□□□ 0.97
COL18A1-202ENST00000355480 SYNJ1O43426 1573 aa21.12■□□□□ 0.97
COL18A1-202ENST00000355480 TNIP1Q15025 636 aa21.12■□□□□ 0.97
COL18A1-202ENST00000355480 ANKRD18AQ8IVF6 992 aa21.12■□□□□ 0.97
COL18A1-202ENST00000355480 PHF8Q9UPP1 1060 aa21.12■□□□□ 0.97
COL18A1-202ENST00000355480 SMARCA5O60264 1052 aaPredicted RBP21.11■□□□□ 0.97
COL18A1-202ENST00000355480 PRPF40BQ6NWY9 871 aaKnown RBP21.11■□□□□ 0.97
COL18A1-202ENST00000355480 FOXO3O43524 673 aa21.11■□□□□ 0.97
COL18A1-202ENST00000355480 EPRSP07814 1512 aaKnown RBP21.11■□□□□ 0.97
COL18A1-202ENST00000355480 NEBLO76041 1014 aa21.1■□□□□ 0.97
COL18A1-202ENST00000355480 MAP3K12Q12852 859 aa21.1■□□□□ 0.97
COL18A1-202ENST00000355480 SMTNL1A8MU46 457 aa21.1■□□□□ 0.97
COL18A1-202ENST00000355480 HSP90AB3PQ58FF7 597 aa21.09■□□□□ 0.97
COL18A1-202ENST00000355480 POLA1P09884 1462 aaPredicted RBP21.09■□□□□ 0.97
COL18A1-202ENST00000355480 CCDC112Q8NEF3 446 aa21.09■□□□□ 0.97
COL18A1-202ENST00000355480 CHMP4BP1P59074 171 aa21.09■□□□□ 0.97
COL18A1-202ENST00000355480 RPGRQ92834 1020 aaKnown RBP21.09■□□□□ 0.97
COL18A1-202ENST00000355480 PDIA4P13667 645 aaKnown RBP21.09■□□□□ 0.97
COL18A1-202ENST00000355480 SLC5A1P13866 664 aa21.09■□□□□ 0.97
COL18A1-202ENST00000355480 CCDC83Q8IWF9 413 aa21.09■□□□□ 0.97
COL18A1-202ENST00000355480 SSR1P43307 286 aaKnown RBP21.08■□□□□ 0.97
COL18A1-202ENST00000355480 FILIP1Q7Z7B0 1213 aa21.08■□□□□ 0.97
COL18A1-202ENST00000355480 SCLT1Q96NL6 688 aa21.08■□□□□ 0.97
COL18A1-202ENST00000355480 FERMT3Q86UX7 667 aa21.08■□□□□ 0.97
COL18A1-202ENST00000355480 AMOTL2Q9Y2J4 779 aa21.08■□□□□ 0.97
COL18A1-202ENST00000355480 ENOX2Q16206 610 aaKnown RBP21.08■□□□□ 0.96
COL18A1-202ENST00000355480 LEKR1Q6ZMV7 388 aa21.08■□□□□ 0.96
COL18A1-202ENST00000355480 SUPT6HQ7KZ85 1726 aaKnown RBP21.08■□□□□ 0.96
COL18A1-202ENST00000355480 PPP1R12BO60237 982 aaPredicted RBP21.08■□□□□ 0.96
COL18A1-202ENST00000355480 CCDC184Q52MB2 194 aa21.07■□□□□ 0.96
COL18A1-202ENST00000355480 NGLY1Q96IV0 654 aa21.07■□□□□ 0.96
COL18A1-202ENST00000355480 CENPHQ9H3R5 247 aa21.07■□□□□ 0.96
COL18A1-202ENST00000355480 RANBP6O60518 1105 aaKnown RBP21.07■□□□□ 0.96
COL18A1-202ENST00000355480 CD109Q6YHK3 1445 aa21.07■□□□□ 0.96
COL18A1-202ENST00000355480 ZNF444Q8N0Y2 327 aaPredicted RBP21.07■□□□□ 0.96
COL18A1-202ENST00000355480 CTCFLQ8NI51 663 aaPredicted RBP21.07■□□□□ 0.96
COL18A1-202ENST00000355480 EMILIN1Q9Y6C2 1016 aa21.07■□□□□ 0.96
COL18A1-202ENST00000355480 CCDC96Q2M329 555 aa21.07■□□□□ 0.96
COL18A1-202ENST00000355480 CIZ1Q9ULV3 898 aaPredicted RBP21.07■□□□□ 0.96
COL18A1-202ENST00000355480 CCDC196A0A1B0GTZ2 297 aa21.06■□□□□ 0.96
COL18A1-202ENST00000355480 TRIM21P19474 475 aaKnown RBP21.06■□□□□ 0.96
COL18A1-202ENST00000355480 CCDC8Q9H0W5 538 aaPredicted RBP21.06■□□□□ 0.96
COL18A1-202ENST00000355480 KIAA1328Q86T90 577 aa21.06■□□□□ 0.96
COL18A1-202ENST00000355480 ZNF219Q9P2Y4 722 aaPredicted RBP21.06■□□□□ 0.96
COL18A1-202ENST00000355480 CDK13Q14004 1512 aaKnown RBP21.06■□□□□ 0.96
COL18A1-202ENST00000355480 ANKRD18BA2A2Z9 1011 aa21.06■□□□□ 0.96
COL18A1-202ENST00000355480 F6X3S4 739 aa21.06■□□□□ 0.96
COL18A1-202ENST00000355480 EPB41L2O43491 1005 aaKnown RBP21.06■□□□□ 0.96
COL18A1-202ENST00000355480 WDHD1O75717 1129 aaPredicted RBP21.06■□□□□ 0.96
COL18A1-202ENST00000355480 DNAAF4Q8WXU2 420 aa21.06■□□□□ 0.96
COL18A1-202ENST00000355480 ERLIN1O75477 346 aa21.06■□□□□ 0.96
COL18A1-202ENST00000355480 TAX1BP1Q86VP1 789 aa21.06■□□□□ 0.96
COL18A1-202ENST00000355480 GRPEL1Q9HAV7 217 aa21.06■□□□□ 0.96
COL18A1-202ENST00000355480 SSH1Q8WYL5 1049 aa21.05■□□□□ 0.96
COL18A1-202ENST00000355480 LRRFIP2Q9Y608 721 aaKnown RBP21.05■□□□□ 0.96
COL18A1-202ENST00000355480 ARHGEF11O15085 1522 aa21.05■□□□□ 0.96
COL18A1-202ENST00000355480 ALDH1L2Q3SY69 923 aa21.05■□□□□ 0.96
COL18A1-202ENST00000355480 CCDC141Q6ZP82 1450 aa21.05■□□□□ 0.96
COL18A1-202ENST00000355480 EXOC5O00471 708 aa21.05■□□□□ 0.96
COL18A1-202ENST00000355480 MAP3K11Q16584 847 aa21.05■□□□□ 0.96
COL18A1-202ENST00000355480 CFAP100Q494V2 611 aa21.05■□□□□ 0.96
COL18A1-202ENST00000355480 IQCEQ6IPM2 695 aa21.05■□□□□ 0.96
COL18A1-202ENST00000355480 TAF4BQ92750 862 aa21.05■□□□□ 0.96
COL18A1-202ENST00000355480 POTEJP0CG39 1038 aa21.05■□□□□ 0.96
COL18A1-202ENST00000355480 IQCA1Q86XH1 822 aa21.04■□□□□ 0.96
COL18A1-202ENST00000355480 TIAM1Q13009 1591 aa21.04■□□□□ 0.96
COL18A1-202ENST00000355480 TTLL12Q14166 644 aaPredicted RBP21.04■□□□□ 0.96
COL18A1-202ENST00000355480 CAMK4Q16566 473 aa21.04■□□□□ 0.96
COL18A1-202ENST00000355480 HYPKQ9NX55 129 aa21.04■□□□□ 0.96
COL18A1-202ENST00000355480 PPP4R3AQ6IN85 833 aa21.04■□□□□ 0.96
COL18A1-202ENST00000355480 CCDC82Q8N4S0 544 aa21.04■□□□□ 0.96
COL18A1-202ENST00000355480 ZNF397Q8NF99 534 aaPredicted RBP21.04■□□□□ 0.96
COL18A1-202ENST00000355480 GPTP24298 496 aa21.03■□□□□ 0.96
COL18A1-202ENST00000355480 WDR78Q5VTH9 848 aa21.03■□□□□ 0.96
COL18A1-202ENST00000355480 A0A087WZG4 1122 aa21.03■□□□□ 0.96
COL18A1-202ENST00000355480 DBF4Q9UBU7 674 aaPredicted RBP21.03■□□□□ 0.96
COL18A1-202ENST00000355480 WASLO00401 505 aaPredicted RBP21.03■□□□□ 0.96
COL18A1-202ENST00000355480 BRPF3Q9ULD4 1205 aa21.03■□□□□ 0.96
COL18A1-202ENST00000355480 ZNF213O14771 459 aa21.02■□□□□ 0.96
COL18A1-202ENST00000355480 ZBTB3Q9H5J0 574 aa21.02■□□□□ 0.96
COL18A1-202ENST00000355480 SLC12A7Q9Y666 1083 aa21.02■□□□□ 0.96
COL18A1-202ENST00000355480 ABCC11Q96J66 1382 aa21.02■□□□□ 0.96
COL18A1-202ENST00000355480 JAKMIP3Q5VZ66 844 aa21.02■□□□□ 0.96
COL18A1-202ENST00000355480 SLF2Q8IX21 1173 aa21.02■□□□□ 0.96
COL18A1-202ENST00000355480 ARHGAP29Q52LW3 1261 aa21.02■□□□□ 0.96
COL18A1-202ENST00000355480 CUL5Q93034 780 aa21.02■□□□□ 0.96
COL18A1-202ENST00000355480 UBA5Q9GZZ9 404 aa21.02■□□□□ 0.96
COL18A1-202ENST00000355480 C8orf76Q96K31 380 aa21.02■□□□□ 0.95
COL18A1-202ENST00000355480 FAM193AP78312 1265 aa21.01■□□□□ 0.95
COL18A1-202ENST00000355480 PRXQ9BXM0 1461 aa21.01■□□□□ 0.95
COL18A1-202ENST00000355480 C6orf229H3BNL8 230 aa21.01■□□□□ 0.95
COL18A1-202ENST00000355480 RARSP54136 660 aaKnown RBP21.01■□□□□ 0.95
COL18A1-202ENST00000355480 FBXO31Q5XUX0 539 aaPredicted RBP21■□□□□ 0.95
COL18A1-202ENST00000355480 RNF41Q9H4P4 317 aaPredicted RBP21■□□□□ 0.95
COL18A1-202ENST00000355480 HMGB1P09429 215 aaKnown RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms