RNA–Protein interactions for RNA: ENST00000355387.6

RNF220-202, Transcript of ring finger protein 220, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF220, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-202ENST00000355387 CCDC173Q0VFZ6 552 aa15.9■□□□□ 0.14
RNF220-202ENST00000355387 MED1Q15648 1581 aaPredicted RBP15.89■□□□□ 0.13
RNF220-202ENST00000355387 SRCIN1Q9C0H9 1055 aa15.89■□□□□ 0.13
RNF220-202ENST00000355387 PHRF1Q9P1Y6 1649 aaKnown RBP15.89■□□□□ 0.13
RNF220-202ENST00000355387 GAS2L3Q86XJ1 694 aa15.89■□□□□ 0.13
RNF220-202ENST00000355387 OTUD7AQ8TE49 926 aaPredicted RBP15.89■□□□□ 0.13
RNF220-202ENST00000355387 STK31Q9BXU1 1019 aa15.88■□□□□ 0.13
RNF220-202ENST00000355387 GLIPR1L2Q4G1C9 344 aa15.88■□□□□ 0.13
RNF220-202ENST00000355387 CCDC30Q5VVM6 783 aa15.88■□□□□ 0.13
RNF220-202ENST00000355387 STAP2Q9UGK3 403 aa15.88■□□□□ 0.13
RNF220-202ENST00000355387 KDM3BQ7LBC6 1761 aa15.88■□□□□ 0.13
RNF220-202ENST00000355387 LTKP29376 864 aa15.88■□□□□ 0.13
RNF220-202ENST00000355387 CRYBG1Q9Y4K1 1723 aa15.88■□□□□ 0.13
RNF220-202ENST00000355387 ESPNB1AK53 854 aa15.87■□□□□ 0.13
RNF220-202ENST00000355387 EID1Q9Y6B2 187 aa15.87■□□□□ 0.13
RNF220-202ENST00000355387 ATP8B2P98198 1209 aa15.86■□□□□ 0.13
RNF220-202ENST00000355387 PLPPR3Q6T4P5 718 aa15.86■□□□□ 0.13
RNF220-202ENST00000355387 DDX49Q9Y6V7 483 aaKnown RBP15.86■□□□□ 0.13
RNF220-202ENST00000355387 LMBRD1Q9NUN5 540 aa15.86■□□□□ 0.13
RNF220-202ENST00000355387 MAP3K5Q99683 1374 aa15.86■□□□□ 0.13
RNF220-202ENST00000355387 SMARCA5O60264 1052 aaPredicted RBP15.86■□□□□ 0.13
RNF220-202ENST00000355387 EYA1Q99502 592 aa15.86■□□□□ 0.13
RNF220-202ENST00000355387 LRRCC1Q9C099 1032 aa15.86■□□□□ 0.13
RNF220-202ENST00000355387 LTN1O94822 1766 aa15.85■□□□□ 0.13
RNF220-202ENST00000355387 MCCP23508 829 aa15.85■□□□□ 0.13
RNF220-202ENST00000355387 G2E3Q7L622 706 aa15.85■□□□□ 0.13
RNF220-202ENST00000355387 TRIM44Q96DX7 344 aaPredicted RBP15.85■□□□□ 0.13
RNF220-202ENST00000355387 CHMP4AQ9BY43 222 aa15.85■□□□□ 0.13
RNF220-202ENST00000355387 FOXD4L1Q9NU39 408 aa15.85■□□□□ 0.13
RNF220-202ENST00000355387 GNAT3A8MTJ3 354 aa15.84■□□□□ 0.13
RNF220-202ENST00000355387 FLIIQ13045 1269 aa15.84■□□□□ 0.13
RNF220-202ENST00000355387 HS1BP3Q53T59 392 aa15.84■□□□□ 0.13
RNF220-202ENST00000355387 INTS4Q96HW7 963 aaKnown RBP15.84■□□□□ 0.13
RNF220-202ENST00000355387 FER1L4A9Z1Z3 1794 aa15.84■□□□□ 0.13
RNF220-202ENST00000355387 LMO7Q8WWI1 1683 aa15.84■□□□□ 0.13
RNF220-202ENST00000355387 CUL4AQ13619 759 aa15.84■□□□□ 0.13
RNF220-202ENST00000355387 ESYT1Q9BSJ8 1104 aa15.84■□□□□ 0.13
RNF220-202ENST00000355387 MX1P20591 662 aa15.83■□□□□ 0.12
RNF220-202ENST00000355387 AMOTL2Q9Y2J4 779 aa15.83■□□□□ 0.12
RNF220-202ENST00000355387 NASPP49321 788 aaPredicted RBP15.83■□□□□ 0.12
RNF220-202ENST00000355387 FOXO3O43524 673 aa15.82■□□□□ 0.12
RNF220-202ENST00000355387 AMPHP49418 695 aa15.82■□□□□ 0.12
RNF220-202ENST00000355387 ANP32BQ92688 251 aaKnown RBP15.82■□□□□ 0.12
RNF220-202ENST00000355387 HOXB7P09629 217 aa15.81■□□□□ 0.12
RNF220-202ENST00000355387 ARXQ96QS3 562 aa15.81■□□□□ 0.12
RNF220-202ENST00000355387 ADGRL3Q9HAR2 1447 aa15.81■□□□□ 0.12
RNF220-202ENST00000355387 RAB11FIP3O75154 756 aa15.81■□□□□ 0.12
RNF220-202ENST00000355387 MCTP1Q6DN14 999 aa15.81■□□□□ 0.12
RNF220-202ENST00000355387 SLC4A10Q6U841 1118 aa15.81■□□□□ 0.12
RNF220-202ENST00000355387 LMTK3Q96Q04 1460 aa15.8■□□□□ 0.12
RNF220-202ENST00000355387 CEMIPQ8WUJ3 1361 aa15.8■□□□□ 0.12
RNF220-202ENST00000355387 F6X3S4 739 aa15.8■□□□□ 0.12
RNF220-202ENST00000355387 HOXC9P31274 260 aa15.8■□□□□ 0.12
RNF220-202ENST00000355387 ZDHHC9Q9Y397 364 aa15.8■□□□□ 0.12
RNF220-202ENST00000355387 MBD3O95983 291 aa15.8■□□□□ 0.12
RNF220-202ENST00000355387 TAF7Q15545 349 aaPredicted RBP15.8■□□□□ 0.12
RNF220-202ENST00000355387 ZSCAN23Q3MJ62 389 aa15.8■□□□□ 0.12
RNF220-202ENST00000355387 KLHL34Q8N239 644 aa15.8■□□□□ 0.12
RNF220-202ENST00000355387 NGDNQ8NEJ9 315 aaKnown RBP15.8■□□□□ 0.12
RNF220-202ENST00000355387 SSH3Q8TE77 659 aa15.8■□□□□ 0.12
RNF220-202ENST00000355387 CHMLP26374 656 aa15.79■□□□□ 0.12
RNF220-202ENST00000355387 MIS18AQ9NYP9 233 aa15.79■□□□□ 0.12
RNF220-202ENST00000355387 NFAT5O94916 1531 aa15.79■□□□□ 0.12
RNF220-202ENST00000355387 OVOS2A0A0G2JMS6 1433 aa15.79■□□□□ 0.12
RNF220-202ENST00000355387 FKBP5Q13451 457 aaPredicted RBP15.79■□□□□ 0.12
RNF220-202ENST00000355387 TMX3Q96JJ7 454 aa15.78■□□□□ 0.12
RNF220-202ENST00000355387 ERBB4Q15303 1308 aa15.78■□□□□ 0.12
RNF220-202ENST00000355387 BRD1O95696 1058 aa15.78■□□□□ 0.12
RNF220-202ENST00000355387 POLA2Q14181 598 aa15.78■□□□□ 0.12
RNF220-202ENST00000355387 CHD2O14647 1828 aaKnown RBP15.77■□□□□ 0.12
RNF220-202ENST00000355387 ZGPATQ8N5A5 531 aaKnown RBP15.77■□□□□ 0.12
RNF220-202ENST00000355387 PDLIM2Q96JY6 352 aa15.77■□□□□ 0.12
RNF220-202ENST00000355387 EXOC6BQ9Y2D4 811 aa15.77■□□□□ 0.12
RNF220-202ENST00000355387 PNMA6EA0A0J9YXQ4 647 aa15.76■□□□□ 0.11
RNF220-202ENST00000355387 APBB1O00213 710 aa15.76■□□□□ 0.11
RNF220-202ENST00000355387 ZSCAN30Q86W11 494 aa15.76■□□□□ 0.11
RNF220-202ENST00000355387 CAMTA1Q9Y6Y1 1673 aa15.76■□□□□ 0.11
RNF220-202ENST00000355387 PLEKHG5O94827 1062 aa15.76■□□□□ 0.11
RNF220-202ENST00000355387 NEK4P51957 841 aa15.76■□□□□ 0.11
RNF220-202ENST00000355387 IL17REQ8NFR9 667 aa15.76■□□□□ 0.11
RNF220-202ENST00000355387 USP44Q9H0E7 712 aa15.76■□□□□ 0.11
RNF220-202ENST00000355387 PKP1Q13835 747 aa15.76■□□□□ 0.11
RNF220-202ENST00000355387 THEMISQ8N1K5 641 aaPredicted RBP15.76■□□□□ 0.11
RNF220-202ENST00000355387 SLC26A8Q96RN1 970 aa15.76■□□□□ 0.11
RNF220-202ENST00000355387 USP42Q9H9J4 1324 aaKnown RBP15.76■□□□□ 0.11
RNF220-202ENST00000355387 NCAPD2Q15021 1401 aa15.76■□□□□ 0.11
RNF220-202ENST00000355387 RRP9O43818 475 aaKnown RBP15.75■□□□□ 0.11
RNF220-202ENST00000355387 UBTFL1P0CB47 393 aaPredicted RBP15.75■□□□□ 0.11
RNF220-202ENST00000355387 CAVIN1Q6NZI2 390 aaKnown RBP15.75■□□□□ 0.11
RNF220-202ENST00000355387 NLRP6P59044 892 aa15.74■□□□□ 0.11
RNF220-202ENST00000355387 LRSAM1Q6UWE0 723 aa15.74■□□□□ 0.11
RNF220-202ENST00000355387 GPT2Q8TD30 523 aa15.74■□□□□ 0.11
RNF220-202ENST00000355387 LRRFIP2Q9Y608 721 aaKnown RBP15.74■□□□□ 0.11
RNF220-202ENST00000355387 TERF1P54274 439 aa15.74■□□□□ 0.11
RNF220-202ENST00000355387 NUTM2FA1L443 756 aa15.74■□□□□ 0.11
RNF220-202ENST00000355387 HSPA4P34932 840 aa15.74■□□□□ 0.11
RNF220-202ENST00000355387 ADAMTS7Q9UKP4 1686 aa15.73■□□□□ 0.11
RNF220-202ENST00000355387 SIPA1L3O60292 1781 aaPredicted RBP15.73■□□□□ 0.11
RNF220-202ENST00000355387 HSP90AB4PQ58FF6 505 aa15.73■□□□□ 0.11
RNF220-202ENST00000355387 PRPF40AO75400 957 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms