RNA–Protein interactions for RNA: ENST00000355257.7

SNU13-202, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-202ENST00000355257 PDE3AQ14432 1141 aa14.3□□□□□ -0.12
SNU13-202ENST00000355257 ZCRB1Q8TBF4 217 aaKnown RBP14.3□□□□□ -0.12
SNU13-202ENST00000355257 PPP1R1BQ9UD71 204 aaPredicted RBP14.3□□□□□ -0.12
SNU13-202ENST00000355257 TNNT2P45379 298 aaPredicted RBP14.29□□□□□ -0.12
SNU13-202ENST00000355257 CENPQQ7L2Z9 268 aaPredicted RBP14.29□□□□□ -0.12
SNU13-202ENST00000355257 USHBP1Q8N6Y0 703 aa14.29□□□□□ -0.12
SNU13-202ENST00000355257 AKT1S1Q96B36 256 aa14.29□□□□□ -0.12
SNU13-202ENST00000355257 COL3A1P02461 1466 aaPredicted RBP14.29□□□□□ -0.12
SNU13-202ENST00000355257 MTFR1LQ9H019 292 aa14.28□□□□□ -0.12
SNU13-202ENST00000355257 ATF5Q9Y2D1 282 aaPredicted RBP14.28□□□□□ -0.12
SNU13-202ENST00000355257 EMILIN1Q9Y6C2 1016 aa14.28□□□□□ -0.12
SNU13-202ENST00000355257 C5P01031 1676 aa14.27□□□□□ -0.12
SNU13-202ENST00000355257 PRIM1P49642 420 aaKnown RBP14.27□□□□□ -0.12
SNU13-202ENST00000355257 SLC27A3Q5K4L6 730 aa14.26□□□□□ -0.13
SNU13-202ENST00000355257 PLEKHF1Q96S99 279 aa14.26□□□□□ -0.13
SNU13-202ENST00000355257 AAMPQ13685 434 aa14.25□□□□□ -0.13
SNU13-202ENST00000355257 BACH2Q9BYV9 841 aa14.25□□□□□ -0.13
SNU13-202ENST00000355257 PNPLA7Q6ZV29 1317 aa14.25□□□□□ -0.13
SNU13-202ENST00000355257 BCAR3O75815 825 aa14.25□□□□□ -0.13
SNU13-202ENST00000355257 CT47B1P0C2W7 299 aaPredicted RBP14.25□□□□□ -0.13
SNU13-202ENST00000355257 PDE4AP27815 886 aa14.25□□□□□ -0.13
SNU13-202ENST00000355257 KCNQ4P56696 695 aa14.25□□□□□ -0.13
SNU13-202ENST00000355257 U2AF1L5P0DN76 240 aaPredicted RBP14.24□□□□□ -0.13
SNU13-202ENST00000355257 U2AF1Q01081 240 aaKnown RBP eCLIP14.24□□□□□ -0.13
SNU13-202ENST00000355257 RAPGEF4Q8WZA2 1011 aa14.24□□□□□ -0.13
SNU13-202ENST00000355257 CHD4Q14839 1912 aa14.23□□□□□ -0.13
SNU13-202ENST00000355257 CYP27B1O15528 508 aa14.23□□□□□ -0.13
SNU13-202ENST00000355257 TATP17735 454 aaPredicted RBP14.23□□□□□ -0.13
SNU13-202ENST00000355257 RARSP54136 660 aaKnown RBP14.23□□□□□ -0.13
SNU13-202ENST00000355257 SYTL4Q96C24 671 aaPredicted RBP14.23□□□□□ -0.13
SNU13-202ENST00000355257 SYT17Q9BSW7 474 aa14.23□□□□□ -0.13
SNU13-202ENST00000355257 FHDC1Q9C0D6 1143 aaPredicted RBP14.23□□□□□ -0.13
SNU13-202ENST00000355257 MYH16Q9H6N6 1097 aa14.23□□□□□ -0.13
SNU13-202ENST00000355257 MAP3K5Q99683 1374 aa14.23□□□□□ -0.13
SNU13-202ENST00000355257 IL16Q14005 1332 aa14.22□□□□□ -0.13
SNU13-202ENST00000355257 PCDH11XQ9BZA7 1347 aa14.22□□□□□ -0.13
SNU13-202ENST00000355257 PCDH11YQ9BZA8 1340 aa14.22□□□□□ -0.13
SNU13-202ENST00000355257 ANP32AP39687 249 aaKnown RBP14.22□□□□□ -0.13
SNU13-202ENST00000355257 IPO9Q96P70 1041 aaKnown RBP14.22□□□□□ -0.13
SNU13-202ENST00000355257 PNNQ9H307 717 aaKnown RBP14.22□□□□□ -0.13
SNU13-202ENST00000355257 POLKQ9UBT6 870 aa14.21□□□□□ -0.13
SNU13-202ENST00000355257 UBR3Q6ZT12 1888 aa14.21□□□□□ -0.14
SNU13-202ENST00000355257 RRP7AQ9Y3A4 280 aaKnown RBP14.2□□□□□ -0.14
SNU13-202ENST00000355257 TMPOP42166 694 aaKnown RBP14.2□□□□□ -0.14
SNU13-202ENST00000355257 SLC16A10Q8TF71 515 aa14.2□□□□□ -0.14
SNU13-202ENST00000355257 ARXQ96QS3 562 aa14.2□□□□□ -0.14
SNU13-202ENST00000355257 EYA1Q99502 592 aa14.2□□□□□ -0.14
SNU13-202ENST00000355257 NOP58Q9Y2X3 529 aaKnown RBP14.2□□□□□ -0.14
SNU13-202ENST00000355257 C4BP0C0L5 1744 aa14.19□□□□□ -0.14
SNU13-202ENST00000355257 DIAPH1O60610 1272 aaKnown RBP14.19□□□□□ -0.14
SNU13-202ENST00000355257 YY1P25490 414 aa14.19□□□□□ -0.14
SNU13-202ENST00000355257 NKX1-1Q15270 411 aaPredicted RBP14.19□□□□□ -0.14
SNU13-202ENST00000355257 CCNL1Q9UK58 526 aaPredicted RBP14.19□□□□□ -0.14
SNU13-202ENST00000355257 FCHSD2O94868 740 aa14.18□□□□□ -0.14
SNU13-202ENST00000355257 NEUROD2Q15784 382 aa14.18□□□□□ -0.14
SNU13-202ENST00000355257 ERICH6Q7L0X2 663 aa14.17□□□□□ -0.14
SNU13-202ENST00000355257 TRIM35Q9UPQ4 493 aa14.17□□□□□ -0.14
SNU13-202ENST00000355257 PALLDQ8WX93 1383 aa14.16□□□□□ -0.14
SNU13-202ENST00000355257 PPM1GO15355 546 aaPredicted RBP14.16□□□□□ -0.14
SNU13-202ENST00000355257 BCL11AQ9H165 835 aa14.16□□□□□ -0.14
SNU13-202ENST00000355257 TFCP2L1Q9NZI6 479 aa14.16□□□□□ -0.14
SNU13-202ENST00000355257 PLEKHG2Q9H7P9 1386 aa14.16□□□□□ -0.14
SNU13-202ENST00000355257 EIF4A2Q14240 407 aaKnown RBP14.15□□□□□ -0.14
SNU13-202ENST00000355257 COL23A1Q86Y22 540 aaPredicted RBP14.15□□□□□ -0.14
SNU13-202ENST00000355257 CLUAP1Q96AJ1 413 aa14.15□□□□□ -0.14
SNU13-202ENST00000355257 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.15□□□□□ -0.14
SNU13-202ENST00000355257 ZNF831Q5JPB2 1677 aa14.15□□□□□ -0.14
SNU13-202ENST00000355257 U2SURPO15042 1029 aaKnown RBP14.15□□□□□ -0.14
SNU13-202ENST00000355257 MPRIPQ6WCQ1 1025 aa14.15□□□□□ -0.14
SNU13-202ENST00000355257 IGSF1Q8N6C5 1336 aa14.14□□□□□ -0.15
SNU13-202ENST00000355257 MAPK8IP3Q9UPT6 1336 aa14.14□□□□□ -0.15
SNU13-202ENST00000355257 DCAF8L1A6NGE4 600 aa14.14□□□□□ -0.15
SNU13-202ENST00000355257 PIGBQ92521 554 aa14.14□□□□□ -0.15
SNU13-202ENST00000355257 AMIGO3Q86WK7 504 aa14.13□□□□□ -0.15
SNU13-202ENST00000355257 RSPH6AQ9H0K4 717 aa14.13□□□□□ -0.15
SNU13-202ENST00000355257 SPG7Q9UQ90 795 aa14.13□□□□□ -0.15
SNU13-202ENST00000355257 COL5A3P25940 1745 aaPredicted RBP14.13□□□□□ -0.15
SNU13-202ENST00000355257 PHKG2P15735 406 aa14.12□□□□□ -0.15
SNU13-202ENST00000355257 CANXP27824 592 aaKnown RBP14.12□□□□□ -0.15
SNU13-202ENST00000355257 PANK1Q8TE04 598 aa14.12□□□□□ -0.15
SNU13-202ENST00000355257 COG6Q9Y2V7 657 aa14.12□□□□□ -0.15
SNU13-202ENST00000355257 VIRMAQ69YN4 1812 aaKnown RBP14.12□□□□□ -0.15
SNU13-202ENST00000355257 IGHDP01880 384 aa14.11□□□□□ -0.15
SNU13-202ENST00000355257 FAM161AQ3B820 660 aa14.11□□□□□ -0.15
SNU13-202ENST00000355257 ZBTB47Q9UFB7 747 aaPredicted RBP14.11□□□□□ -0.15
SNU13-202ENST00000355257 POLD1P28340 1107 aa14.1□□□□□ -0.15
SNU13-202ENST00000355257 IL13P35225 146 aa14.1□□□□□ -0.15
SNU13-202ENST00000355257 RIPK4P57078 832 aa14.1□□□□□ -0.15
SNU13-202ENST00000355257 SMARCC1Q92922 1105 aaPredicted RBP14.1□□□□□ -0.15
SNU13-202ENST00000355257 UTRNP46939 3433 aa14.1□□□□□ -0.15
SNU13-202ENST00000355257 ZKSCAN2Q63HK3 967 aa14.1□□□□□ -0.15
SNU13-202ENST00000355257 SKAP1Q86WV1 359 aa14.1□□□□□ -0.15
SNU13-202ENST00000355257 IFNL2Q8IZJ0 200 aa14.1□□□□□ -0.15
SNU13-202ENST00000355257 NLGN2Q8NFZ4 835 aa14.1□□□□□ -0.15
SNU13-202ENST00000355257 ZNF428Q96B54 188 aa14.1□□□□□ -0.15
SNU13-202ENST00000355257 SCN11AQ9UI33 1791 aa14.1□□□□□ -0.15
SNU13-202ENST00000355257 KDRP35968 1356 aa14.09□□□□□ -0.15
SNU13-202ENST00000355257 RLBP1P12271 317 aa14.09□□□□□ -0.15
SNU13-202ENST00000355257 BRPF1P55201 1214 aaPredicted RBP14.09□□□□□ -0.15
SNU13-202ENST00000355257 C8orf34Q49A92 452 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms