RNA–Protein interactions for RNA: ENST00000350033.7

COPS7B-201, Transcript of COP9 signalosome subunit 7B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7B, Length 2,544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-201ENST00000350033 PDCL3Q9H2J4 239 aa16.66■□□□□ 0.26
COPS7B-201ENST00000350033 TAF7Q15545 349 aaPredicted RBP16.66■□□□□ 0.26
COPS7B-201ENST00000350033 TBC1D9Q6ZT07 1266 aa16.66■□□□□ 0.26
COPS7B-201ENST00000350033 STK31Q9BXU1 1019 aa16.66■□□□□ 0.26
COPS7B-201ENST00000350033 HTATSF1O43719 755 aaKnown RBP16.65■□□□□ 0.26
COPS7B-201ENST00000350033 FLIIQ13045 1269 aa16.65■□□□□ 0.26
COPS7B-201ENST00000350033 FKBP5Q13451 457 aaPredicted RBP16.65■□□□□ 0.26
COPS7B-201ENST00000350033 PROSER2Q86WR7 435 aaPredicted RBP16.65■□□□□ 0.26
COPS7B-201ENST00000350033 DDX17Q92841 729 aaKnown RBP16.65■□□□□ 0.26
COPS7B-201ENST00000350033 KCNQ3O43525 872 aa16.65■□□□□ 0.26
COPS7B-201ENST00000350033 GCP02774 474 aa16.64■□□□□ 0.25
COPS7B-201ENST00000350033 ANTXR1Q9H6X2 564 aa16.64■□□□□ 0.25
COPS7B-201ENST00000350033 PHAXQ9H814 394 aaKnown RBP16.63■□□□□ 0.25
COPS7B-201ENST00000350033 FAM208AQ9UK61 1670 aaKnown RBP16.63■□□□□ 0.25
COPS7B-201ENST00000350033 EIF2S2P20042 333 aaKnown RBP16.63■□□□□ 0.25
COPS7B-201ENST00000350033 CCDC30Q5VVM6 783 aa16.63■□□□□ 0.25
COPS7B-201ENST00000350033 MPRIPQ6WCQ1 1025 aa16.63■□□□□ 0.25
COPS7B-201ENST00000350033 RPAP2Q8IXW5 612 aaPredicted RBP16.63■□□□□ 0.25
COPS7B-201ENST00000350033 AXIN2Q9Y2T1 843 aa16.63■□□□□ 0.25
COPS7B-201ENST00000350033 KCNH5Q8NCM2 988 aa16.61■□□□□ 0.25
COPS7B-201ENST00000350033 CCT4P50991 539 aaKnown RBP16.61■□□□□ 0.25
COPS7B-201ENST00000350033 KRT28Q7Z3Y7 464 aa16.61■□□□□ 0.25
COPS7B-201ENST00000350033 ANXA1P04083 346 aa16.6■□□□□ 0.25
COPS7B-201ENST00000350033 TPM2P07951 284 aa16.6■□□□□ 0.25
COPS7B-201ENST00000350033 HDGFL1Q5TGJ6 251 aa16.6■□□□□ 0.25
COPS7B-201ENST00000350033 ZNF530Q6P9A1 599 aaPredicted RBP16.6■□□□□ 0.25
COPS7B-201ENST00000350033 ARHGEF25Q86VW2 580 aa16.6■□□□□ 0.25
COPS7B-201ENST00000350033 EXOC6BQ9Y2D4 811 aa16.6■□□□□ 0.25
COPS7B-201ENST00000350033 ZC3H6P61129 1189 aaKnown RBP16.6■□□□□ 0.25
COPS7B-201ENST00000350033 RBM42Q9BTD8 480 aaKnown RBP16.6■□□□□ 0.25
COPS7B-201ENST00000350033 TTC22Q5TAA0 569 aa16.59■□□□□ 0.25
COPS7B-201ENST00000350033 TSHZ3Q63HK5 1081 aa16.59■□□□□ 0.25
COPS7B-201ENST00000350033 ANKRD24Q8TF21 1146 aa16.59■□□□□ 0.25
COPS7B-201ENST00000350033 RBM25P49756 843 aaKnown RBP16.59■□□□□ 0.25
COPS7B-201ENST00000350033 KIF2CQ99661 725 aa16.59■□□□□ 0.25
COPS7B-201ENST00000350033 PXDNQ92626 1479 aa16.59■□□□□ 0.25
COPS7B-201ENST00000350033 CEMIPQ8WUJ3 1361 aa16.58■□□□□ 0.25
COPS7B-201ENST00000350033 PNMA6EA0A0J9YXQ4 647 aa16.58■□□□□ 0.25
COPS7B-201ENST00000350033 CD2BP2O95400 341 aaKnown RBP16.58■□□□□ 0.24
COPS7B-201ENST00000350033 GNAI2P04899 355 aa16.58■□□□□ 0.24
COPS7B-201ENST00000350033 RGPD5Q99666 1765 aa16.58■□□□□ 0.24
COPS7B-201ENST00000350033 CDC45O75419 566 aa16.57■□□□□ 0.24
COPS7B-201ENST00000350033 EIF4A1P60842 406 aaKnown RBP16.57■□□□□ 0.24
COPS7B-201ENST00000350033 DNAJC5Q9H3Z4 198 aa16.57■□□□□ 0.24
COPS7B-201ENST00000350033 LRRFIP2Q9Y608 721 aaKnown RBP16.57■□□□□ 0.24
COPS7B-201ENST00000350033 CHPF2Q9P2E5 772 aa16.56■□□□□ 0.24
COPS7B-201ENST00000350033 BTBD11A6QL63 1104 aa16.56■□□□□ 0.24
COPS7B-201ENST00000350033 SDSP20132 328 aa16.56■□□□□ 0.24
COPS7B-201ENST00000350033 C1orf167Q5SNV9 1468 aa16.56■□□□□ 0.24
COPS7B-201ENST00000350033 HSCBQ8IWL3 235 aa16.55■□□□□ 0.24
COPS7B-201ENST00000350033 PRAMEF22A3QJZ6 481 aa16.55■□□□□ 0.24
COPS7B-201ENST00000350033 TEFQ10587 303 aa16.55■□□□□ 0.24
COPS7B-201ENST00000350033 CABLES1Q8TDN4 633 aa16.55■□□□□ 0.24
COPS7B-201ENST00000350033 FOXD4L1Q9NU39 408 aa16.55■□□□□ 0.24
COPS7B-201ENST00000350033 TRPM3Q9HCF6 1732 aaPredicted RBP16.55■□□□□ 0.24
COPS7B-201ENST00000350033 PLEKHO1Q53GL0 409 aaPredicted RBP16.54■□□□□ 0.24
COPS7B-201ENST00000350033 AKAP4Q5JQC9 854 aa16.54■□□□□ 0.24
COPS7B-201ENST00000350033 USP44Q9H0E7 712 aa16.54■□□□□ 0.24
COPS7B-201ENST00000350033 HMMRO75330 724 aa16.54■□□□□ 0.24
COPS7B-201ENST00000350033 C19orf44Q9H6X5 657 aa16.54■□□□□ 0.24
COPS7B-201ENST00000350033 SLIT3O75094 1523 aa16.54■□□□□ 0.24
COPS7B-201ENST00000350033 RNMTO43148 476 aaKnown RBP16.53■□□□□ 0.24
COPS7B-201ENST00000350033 CACNA1FO60840 1977 aa16.53■□□□□ 0.24
COPS7B-201ENST00000350033 MED1Q15648 1581 aaPredicted RBP16.52■□□□□ 0.24
COPS7B-201ENST00000350033 XRCC6P12956 609 aaKnown RBP eCLIP16.52■□□□□ 0.24
COPS7B-201ENST00000350033 HSPA2P54652 639 aa16.52■□□□□ 0.24
COPS7B-201ENST00000350033 BABAM1Q9NWV8 329 aa16.52■□□□□ 0.24
COPS7B-201ENST00000350033 KDM3BQ7LBC6 1761 aa16.52■□□□□ 0.23
COPS7B-201ENST00000350033 C1orf141Q5JVX7 400 aa16.52■□□□□ 0.23
COPS7B-201ENST00000350033 LMO7Q8WWI1 1683 aa16.52■□□□□ 0.23
COPS7B-201ENST00000350033 STRCP1A6NGW2 1772 aa16.51■□□□□ 0.23
COPS7B-201ENST00000350033 PHRF1Q9P1Y6 1649 aaKnown RBP16.51■□□□□ 0.23
COPS7B-201ENST00000350033 GNAI3P08754 354 aa16.51■□□□□ 0.23
COPS7B-201ENST00000350033 PDIA4P13667 645 aaKnown RBP16.51■□□□□ 0.23
COPS7B-201ENST00000350033 ATP8B2P98198 1209 aa16.51■□□□□ 0.23
COPS7B-201ENST00000350033 TMEM94Q12767 1356 aa16.51■□□□□ 0.23
COPS7B-201ENST00000350033 PROSER3Q2NL68 480 aa16.51■□□□□ 0.23
COPS7B-201ENST00000350033 FSD2A1L4K1 749 aa16.5■□□□□ 0.23
COPS7B-201ENST00000350033 PI4KAP2A4QPH2 592 aa16.5■□□□□ 0.23
COPS7B-201ENST00000350033 PDE1AP54750 535 aa16.5■□□□□ 0.23
COPS7B-201ENST00000350033 PI4KAP1Q8N8J0 262 aa16.5■□□□□ 0.23
COPS7B-201ENST00000350033 GOLGA6L3A6NEY3 463 aa16.5■□□□□ 0.23
COPS7B-201ENST00000350033 UBTFL1P0CB47 393 aaPredicted RBP16.5■□□□□ 0.23
COPS7B-201ENST00000350033 ATF3P18847 181 aa16.5■□□□□ 0.23
COPS7B-201ENST00000350033 NBPF7P0C2Y1 421 aaPredicted RBP16.49■□□□□ 0.23
COPS7B-201ENST00000350033 CHRNA2Q15822 529 aa16.49■□□□□ 0.23
COPS7B-201ENST00000350033 HSP90AB1P08238 724 aaKnown RBP16.49■□□□□ 0.23
COPS7B-201ENST00000350033 NLRP2Q9NX02 1062 aa16.49■□□□□ 0.23
COPS7B-201ENST00000350033 AMOTQ4VCS5 1084 aa16.48■□□□□ 0.23
COPS7B-201ENST00000350033 SNX21Q969T3 373 aa16.48■□□□□ 0.23
COPS7B-201ENST00000350033 LRRCC1Q9C099 1032 aa16.48■□□□□ 0.23
COPS7B-201ENST00000350033 IL1RAPL2Q9NP60 686 aa16.48■□□□□ 0.23
COPS7B-201ENST00000350033 ERBB3P21860 1342 aa16.48■□□□□ 0.23
COPS7B-201ENST00000350033 USP26Q9BXU7 913 aa16.48■□□□□ 0.23
COPS7B-201ENST00000350033 SRCIN1Q9C0H9 1055 aa16.48■□□□□ 0.23
COPS7B-201ENST00000350033 MST1RQ04912 1400 aa16.47■□□□□ 0.23
COPS7B-201ENST00000350033 SLC39A6Q13433 755 aa16.47■□□□□ 0.23
COPS7B-201ENST00000350033 SOS1Q07889 1333 aaPredicted RBP16.47■□□□□ 0.23
COPS7B-201ENST00000350033 PPP1R42Q7Z4L9 355 aa16.47■□□□□ 0.23
COPS7B-201ENST00000350033 CHMP5Q9NZZ3 219 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms