RNA–Protein interactions for RNA: ENST00000349299.7

H2AFV-203, Transcript of H2A histone family member V, humanhuman

TSL 2 BASIC

Gene H2AFV, Length 596 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-203ENST00000349299 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.93□□□□□ -0.342e-6■□□□□ 8.4
H2AFV-203ENST00000349299 SPG7Q9UQ90 795 aa12.93□□□□□ -0.34
H2AFV-203ENST00000349299 PCDH11XQ9BZA7 1347 aa12.92□□□□□ -0.34
H2AFV-203ENST00000349299 PCDH11YQ9BZA8 1340 aa12.92□□□□□ -0.34
H2AFV-203ENST00000349299 MAP3K13O43283 966 aa12.92□□□□□ -0.34
H2AFV-203ENST00000349299 FCHSD2O94868 740 aa12.92□□□□□ -0.34
H2AFV-203ENST00000349299 WDR43Q15061 677 aaKnown RBP eCLIP12.92□□□□□ -0.34
H2AFV-203ENST00000349299 PLEKHO1Q53GL0 409 aaPredicted RBP12.92□□□□□ -0.34
H2AFV-203ENST00000349299 MARCH10Q8NA82 808 aaPredicted RBP12.92□□□□□ -0.34
H2AFV-203ENST00000349299 DDX54Q8TDD1 881 aaKnown RBP12.92□□□□□ -0.34
H2AFV-203ENST00000349299 MRS2Q9HD23 443 aa12.92□□□□□ -0.34
H2AFV-203ENST00000349299 SIPA1L3O60292 1781 aaPredicted RBP12.92□□□□□ -0.34
H2AFV-203ENST00000349299 PRKAR2BP31323 418 aa12.91□□□□□ -0.34
H2AFV-203ENST00000349299 AMOTQ4VCS5 1084 aa12.91□□□□□ -0.34
H2AFV-203ENST00000349299 FAM182BQ5T319 152 aa12.91□□□□□ -0.34
H2AFV-203ENST00000349299 IFNLR1Q8IU57 520 aaPredicted RBP12.91□□□□□ -0.34
H2AFV-203ENST00000349299 KLHL34Q8N239 644 aa12.91□□□□□ -0.34
H2AFV-203ENST00000349299 EP400Q96L91 3159 aa12.9□□□□□ -0.34
H2AFV-203ENST00000349299 BCL9O00512 1426 aa12.9□□□□□ -0.34
H2AFV-203ENST00000349299 CYP27B1O15528 508 aa12.9□□□□□ -0.34
H2AFV-203ENST00000349299 RGPD3A6NKT7 1758 aaPredicted RBP12.89□□□□□ -0.35
H2AFV-203ENST00000349299 RGPD4Q7Z3J3 1758 aa12.89□□□□□ -0.35
H2AFV-203ENST00000349299 ZNF530Q6P9A1 599 aaPredicted RBP12.89□□□□□ -0.35
H2AFV-203ENST00000349299 FAM196AQ6ZSG2 479 aa12.89□□□□□ -0.35
H2AFV-203ENST00000349299 PNNQ9H307 717 aaKnown RBP12.89□□□□□ -0.35
H2AFV-203ENST00000349299 CCER2I3L3R5 266 aa12.88□□□□□ -0.35
H2AFV-203ENST00000349299 PHKG2P15735 406 aa12.88□□□□□ -0.35
H2AFV-203ENST00000349299 IFNL2Q8IZJ0 200 aa12.88□□□□□ -0.35
H2AFV-203ENST00000349299 PNISRQ8TF01 805 aaKnown RBP12.88□□□□□ -0.35
H2AFV-203ENST00000349299 PHACTR3Q96KR7 559 aa12.88□□□□□ -0.35
H2AFV-203ENST00000349299 PLEKHF1Q96S99 279 aa12.88□□□□□ -0.35
H2AFV-203ENST00000349299 ADAMTS8Q9UP79 889 aa12.88□□□□□ -0.35
H2AFV-203ENST00000349299 NEFMP07197 916 aa12.87□□□□□ -0.35
H2AFV-203ENST00000349299 MTHFSDQ2M296 383 aaKnown RBP12.87□□□□□ -0.35
H2AFV-203ENST00000349299 C1orf141Q5JVX7 400 aa12.87□□□□□ -0.35
H2AFV-203ENST00000349299 GAS2L2Q8NHY3 880 aa12.87□□□□□ -0.35
H2AFV-203ENST00000349299 LY75O60449 1722 aa12.87□□□□□ -0.35
H2AFV-203ENST00000349299 MAPK8IP3Q9UPT6 1336 aa12.87□□□□□ -0.35
H2AFV-203ENST00000349299 NKX1-1Q15270 411 aaPredicted RBP12.86□□□□□ -0.35
H2AFV-203ENST00000349299 AKAP4Q5JQC9 854 aa12.86□□□□□ -0.35
H2AFV-203ENST00000349299 KDM6AO15550 1401 aaPredicted RBP12.86□□□□□ -0.35
H2AFV-203ENST00000349299 PAPPAQ13219 1627 aa12.85□□□□□ -0.35
H2AFV-203ENST00000349299 MAP3K5Q99683 1374 aa12.85□□□□□ -0.35
H2AFV-203ENST00000349299 HSP90AB1P08238 724 aaKnown RBP12.85□□□□□ -0.35
H2AFV-203ENST00000349299 ASTLQ6HA08 431 aaPredicted RBP12.85□□□□□ -0.35
H2AFV-203ENST00000349299 RUNDC1Q96C34 613 aa12.85□□□□□ -0.35
H2AFV-203ENST00000349299 TRPC6Q9Y210 931 aa12.85□□□□□ -0.35
H2AFV-203ENST00000349299 MRC1P22897 1456 aa12.85□□□□□ -0.35
H2AFV-203ENST00000349299 RREB1Q92766 1687 aa12.84□□□□□ -0.35
H2AFV-203ENST00000349299 DCAF8Q5TAQ9 597 aa12.84□□□□□ -0.35
H2AFV-203ENST00000349299 CCDC146Q8IYE0 955 aa12.84□□□□□ -0.35
H2AFV-203ENST00000349299 ACSBG1Q96GR2 724 aa12.84□□□□□ -0.35
H2AFV-203ENST00000349299 ATMINO43313 823 aaPredicted RBP12.83□□□□□ -0.36
H2AFV-203ENST00000349299 TRIM37O94972 964 aa12.83□□□□□ -0.36
H2AFV-203ENST00000349299 NFE2L2Q16236 605 aa12.83□□□□□ -0.36
H2AFV-203ENST00000349299 PELP1Q8IZL8 1130 aaKnown RBP12.83□□□□□ -0.36
H2AFV-203ENST00000349299 DCAF5Q96JK2 942 aa12.83□□□□□ -0.36
H2AFV-203ENST00000349299 SGIP1Q9BQI5 828 aa12.83□□□□□ -0.36
H2AFV-203ENST00000349299 UBR2Q8IWV8 1755 aa12.83□□□□□ -0.36
H2AFV-203ENST00000349299 TAF1LQ8IZX4 1826 aa12.83□□□□□ -0.36
H2AFV-203ENST00000349299 KDM3BQ7LBC6 1761 aa12.82□□□□□ -0.36
H2AFV-203ENST00000349299 GNAT3A8MTJ3 354 aa12.82□□□□□ -0.36
H2AFV-203ENST00000349299 MPRIPQ6WCQ1 1025 aa12.82□□□□□ -0.36
H2AFV-203ENST00000349299 FAM9BQ8IZU0 186 aa12.82□□□□□ -0.36
H2AFV-203ENST00000349299 UPF1Q92900 1129 aaKnown RBP eCLIP12.82□□□□□ -0.36
H2AFV-203ENST00000349299 RNMTO43148 476 aaKnown RBP12.81□□□□□ -0.36
H2AFV-203ENST00000349299 KCNQ2O43526 872 aa12.81□□□□□ -0.36
H2AFV-203ENST00000349299 PRIM1P49642 420 aaKnown RBP12.81□□□□□ -0.36
H2AFV-203ENST00000349299 LHX8Q68G74 356 aa12.81□□□□□ -0.36
H2AFV-203ENST00000349299 BCL11BQ9C0K0 894 aaPredicted RBP12.81□□□□□ -0.36
H2AFV-203ENST00000349299 PCDHB13Q9Y5F0 798 aa12.81□□□□□ -0.36
H2AFV-203ENST00000349299 NUP188Q5SRE5 1749 aa12.81□□□□□ -0.36
H2AFV-203ENST00000349299 ZNF831Q5JPB2 1677 aa12.8□□□□□ -0.36
H2AFV-203ENST00000349299 ERVV-2B6SEH9 535 aa12.8□□□□□ -0.36
H2AFV-203ENST00000349299 HTATSF1O43719 755 aaKnown RBP12.8□□□□□ -0.36
H2AFV-203ENST00000349299 TMPOP42166 694 aaKnown RBP12.8□□□□□ -0.36
H2AFV-203ENST00000349299 PTF1AQ7RTS3 328 aa12.8□□□□□ -0.36
H2AFV-203ENST00000349299 CCDC125Q86Z20 511 aa12.8□□□□□ -0.36
H2AFV-203ENST00000349299 SYTL4Q96C24 671 aaPredicted RBP12.8□□□□□ -0.36
H2AFV-203ENST00000349299 LGR6Q9HBX8 967 aa12.8□□□□□ -0.36
H2AFV-203ENST00000349299 SF3B2Q13435 895 aaKnown RBP12.79□□□□□ -0.36
H2AFV-203ENST00000349299 RTF1Q92541 710 aaKnown RBP12.79□□□□□ -0.36
H2AFV-203ENST00000349299 C5P01031 1676 aa12.79□□□□□ -0.36
H2AFV-203ENST00000349299 CEMIPQ8WUJ3 1361 aa12.79□□□□□ -0.36
H2AFV-203ENST00000349299 SOCS7O14512 581 aa12.78□□□□□ -0.36
H2AFV-203ENST00000349299 APAF1O14727 1248 aa12.78□□□□□ -0.36
H2AFV-203ENST00000349299 RIPK4P57078 832 aa12.78□□□□□ -0.36
H2AFV-203ENST00000349299 IL17REQ8NFR9 667 aa12.78□□□□□ -0.36
H2AFV-203ENST00000349299 SPOCK2Q92563 424 aa12.78□□□□□ -0.36
H2AFV-203ENST00000349299 BMP2KQ9NSY1 1161 aaPredicted RBP12.78□□□□□ -0.36
H2AFV-203ENST00000349299 TMOD3Q9NYL9 352 aa12.78□□□□□ -0.36
H2AFV-203ENST00000349299 RRP7AQ9Y3A4 280 aaKnown RBP12.78□□□□□ -0.36
H2AFV-203ENST00000349299 CICQ96RK0 1608 aaPredicted RBP12.77□□□□□ -0.36
H2AFV-203ENST00000349299 COL5A3P25940 1745 aaPredicted RBP12.77□□□□□ -0.36
H2AFV-203ENST00000349299 APBA3O96018 575 aa12.77□□□□□ -0.37
H2AFV-203ENST00000349299 PYGBP11216 843 aa12.77□□□□□ -0.37
H2AFV-203ENST00000349299 CABP4P57796 275 aa12.77□□□□□ -0.37
H2AFV-203ENST00000349299 GSE1Q14687 1217 aa12.77□□□□□ -0.37
H2AFV-203ENST00000349299 NEUROD2Q15784 382 aa12.77□□□□□ -0.37
H2AFV-203ENST00000349299 MCM10Q7L590 875 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms