RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 OS9Q13438 667 aaPredicted RBP17.22■□□□□ 0.35
TRIM4-201ENST00000349062 RAPGEF4Q8WZA2 1011 aa17.22■□□□□ 0.35
TRIM4-201ENST00000349062 KNDC1Q76NI1 1749 aa17.21■□□□□ 0.35
TRIM4-201ENST00000349062 PI4KAP2A4QPH2 592 aa17.21■□□□□ 0.35
TRIM4-201ENST00000349062 HSP90AB1P08238 724 aaKnown RBP17.21■□□□□ 0.35
TRIM4-201ENST00000349062 PI4KAP1Q8N8J0 262 aa17.21■□□□□ 0.35
TRIM4-201ENST00000349062 ZNF330Q9Y3S2 320 aaPredicted RBP17.21■□□□□ 0.35
TRIM4-201ENST00000349062 GNAI2P04899 355 aa17.21■□□□□ 0.35
TRIM4-201ENST00000349062 ANKRD44Q8N8A2 993 aa17.21■□□□□ 0.35
TRIM4-201ENST00000349062 C19orf44Q9H6X5 657 aa17.21■□□□□ 0.35
TRIM4-201ENST00000349062 PLEKHM2Q8IWE5 1019 aa17.2■□□□□ 0.34
TRIM4-201ENST00000349062 UBTFL1P0CB47 393 aaPredicted RBP17.2■□□□□ 0.34
TRIM4-201ENST00000349062 GSPT1P15170 499 aaKnown RBP17.2■□□□□ 0.34
TRIM4-201ENST00000349062 HMMRO75330 724 aa17.19■□□□□ 0.34
TRIM4-201ENST00000349062 BRPF1P55201 1214 aaPredicted RBP17.19■□□□□ 0.34
TRIM4-201ENST00000349062 DCTPP1Q9H773 170 aa17.19■□□□□ 0.34
TRIM4-201ENST00000349062 STRN4Q9NRL3 753 aa17.19■□□□□ 0.34
TRIM4-201ENST00000349062 PTPRCP08575 1304 aa17.19■□□□□ 0.34
TRIM4-201ENST00000349062 NUTM1Q86Y26 1132 aa17.19■□□□□ 0.34
TRIM4-201ENST00000349062 PROSER3Q2NL68 480 aa17.18■□□□□ 0.34
TRIM4-201ENST00000349062 CCDC9Q9Y3X0 531 aaKnown RBP17.18■□□□□ 0.34
TRIM4-201ENST00000349062 RTL1A6NKG5 1358 aa17.18■□□□□ 0.34
TRIM4-201ENST00000349062 TMEM94Q12767 1356 aa17.18■□□□□ 0.34
TRIM4-201ENST00000349062 SURF6O75683 361 aaKnown RBP17.18■□□□□ 0.34
TRIM4-201ENST00000349062 CCT4P50991 539 aaKnown RBP17.18■□□□□ 0.34
TRIM4-201ENST00000349062 ARHGEF25Q86VW2 580 aa17.17■□□□□ 0.34
TRIM4-201ENST00000349062 KAT6BQ8WYB5 2073 aa17.17■□□□□ 0.34
TRIM4-201ENST00000349062 RPAP2Q8IXW5 612 aaPredicted RBP17.17■□□□□ 0.34
TRIM4-201ENST00000349062 PIK3C2AO00443 1686 aa17.16■□□□□ 0.34
TRIM4-201ENST00000349062 BMP2KLQ5H9B9 411 aa17.16■□□□□ 0.34
TRIM4-201ENST00000349062 NBPF7P0C2Y1 421 aaPredicted RBP17.16■□□□□ 0.34
TRIM4-201ENST00000349062 NFATC2IPQ8NCF5 419 aa17.16■□□□□ 0.34
TRIM4-201ENST00000349062 CWF19L2Q2TBE0 894 aaKnown RBP17.15■□□□□ 0.34
TRIM4-201ENST00000349062 C9orf78Q9NZ63 289 aaPredicted RBP17.15■□□□□ 0.34
TRIM4-201ENST00000349062 KDRP35968 1356 aa17.15■□□□□ 0.34
TRIM4-201ENST00000349062 CDC45O75419 566 aa17.15■□□□□ 0.34
TRIM4-201ENST00000349062 SDSP20132 328 aa17.15■□□□□ 0.34
TRIM4-201ENST00000349062 TPRNQ4KMQ1 711 aa17.15■□□□□ 0.34
TRIM4-201ENST00000349062 KIAA0232Q92628 1395 aa17.15■□□□□ 0.34
TRIM4-201ENST00000349062 SRGAP3O43295 1099 aa17.15■□□□□ 0.34
TRIM4-201ENST00000349062 ANKARQ7Z5J8 1434 aa17.15■□□□□ 0.34
TRIM4-201ENST00000349062 SRCIN1Q9C0H9 1055 aa17.15■□□□□ 0.34
TRIM4-201ENST00000349062 ADGRL3Q9HAR2 1447 aa17.15■□□□□ 0.34
TRIM4-201ENST00000349062 EIF4A1P60842 406 aaKnown RBP17.14■□□□□ 0.33
TRIM4-201ENST00000349062 FOXD4L5Q5VV16 416 aaPredicted RBP17.14■□□□□ 0.33
TRIM4-201ENST00000349062 DDX54Q8TDD1 881 aaKnown RBP17.14■□□□□ 0.33
TRIM4-201ENST00000349062 FOXD4L4Q8WXT5 416 aaPredicted RBP17.14■□□□□ 0.33
TRIM4-201ENST00000349062 RNMTO43148 476 aaKnown RBP17.14■□□□□ 0.33
TRIM4-201ENST00000349062 CD2BP2O95400 341 aaKnown RBP17.13■□□□□ 0.33
TRIM4-201ENST00000349062 SIL1Q9H173 461 aa17.13■□□□□ 0.33
TRIM4-201ENST00000349062 GNAI3P08754 354 aa17.12■□□□□ 0.33
TRIM4-201ENST00000349062 TTC22Q5TAA0 569 aa17.12■□□□□ 0.33
TRIM4-201ENST00000349062 PPP1R42Q7Z4L9 355 aa17.12■□□□□ 0.33
TRIM4-201ENST00000349062 USP44Q9H0E7 712 aa17.12■□□□□ 0.33
TRIM4-201ENST00000349062 AKAP4Q5JQC9 854 aa17.12■□□□□ 0.33
TRIM4-201ENST00000349062 NAP1L5Q96NT1 182 aaPredicted RBP17.12■□□□□ 0.33
TRIM4-201ENST00000349062 MAP3K2Q9Y2U5 619 aa17.12■□□□□ 0.33
TRIM4-201ENST00000349062 PRDM11Q9NQV5 511 aa17.12■□□□□ 0.33
TRIM4-201ENST00000349062 LRRCC1Q9C099 1032 aa17.11■□□□□ 0.33
TRIM4-201ENST00000349062 PA2G4Q9UQ80 394 aaKnown RBP17.11■□□□□ 0.33
TRIM4-201ENST00000349062 NRKQ7Z2Y5 1582 aa17.11■□□□□ 0.33
TRIM4-201ENST00000349062 RGS12O14924 1447 aa17.11■□□□□ 0.33
TRIM4-201ENST00000349062 TATP17735 454 aaPredicted RBP17.11■□□□□ 0.33
TRIM4-201ENST00000349062 TOM1L2Q6ZVM7 507 aa17.11■□□□□ 0.33
TRIM4-201ENST00000349062 DNAAF4Q8WXU2 420 aa17.11■□□□□ 0.33
TRIM4-201ENST00000349062 PTCD1O75127 700 aaKnown RBP17.1■□□□□ 0.33
TRIM4-201ENST00000349062 TOPAZ1Q8N9V7 1692 aa17.1■□□□□ 0.33
TRIM4-201ENST00000349062 CASC1Q6TDU7 716 aa17.1■□□□□ 0.33
TRIM4-201ENST00000349062 HTATSF1O43719 755 aaKnown RBP17.09■□□□□ 0.33
TRIM4-201ENST00000349062 DTNBO60941 627 aa17.09■□□□□ 0.33
TRIM4-201ENST00000349062 RIC3Q7Z5B4 369 aa17.09■□□□□ 0.33
TRIM4-201ENST00000349062 ANO2Q9NQ90 1003 aa17.09■□□□□ 0.33
TRIM4-201ENST00000349062 NALCNQ8IZF0 1738 aa17.08■□□□□ 0.32
TRIM4-201ENST00000349062 PDE1AP54750 535 aa17.08■□□□□ 0.32
TRIM4-201ENST00000349062 DNAJC5Q9H3Z4 198 aa17.08■□□□□ 0.32
TRIM4-201ENST00000349062 FOXD4L6Q3SYB3 417 aaPredicted RBP17.08■□□□□ 0.32
TRIM4-201ENST00000349062 AMOTQ4VCS5 1084 aa17.08■□□□□ 0.32
TRIM4-201ENST00000349062 FOXD4L3Q6VB84 417 aaPredicted RBP17.08■□□□□ 0.32
TRIM4-201ENST00000349062 TTC5Q8N0Z6 440 aa17.08■□□□□ 0.32
TRIM4-201ENST00000349062 KLHDC4Q8TBB5 520 aa17.08■□□□□ 0.32
TRIM4-201ENST00000349062 CHMP3Q9Y3E7 222 aa17.08■□□□□ 0.32
TRIM4-201ENST00000349062 ATP5J2-PTCD1G3V325 749 aa17.07■□□□□ 0.32
TRIM4-201ENST00000349062 UBE2Q2Q8WVN8 375 aa17.07■□□□□ 0.32
TRIM4-201ENST00000349062 ATP10DQ9P241 1426 aa17.07■□□□□ 0.32
TRIM4-201ENST00000349062 EVA1CP58658 441 aa17.06■□□□□ 0.32
TRIM4-201ENST00000349062 ERBB3P21860 1342 aa17.06■□□□□ 0.32
TRIM4-201ENST00000349062 ZNF335Q9H4Z2 1342 aaPredicted RBP17.06■□□□□ 0.32
TRIM4-201ENST00000349062 XRN1Q8IZH2 1706 aaKnown RBP17.06■□□□□ 0.32
TRIM4-201ENST00000349062 CADPS2Q86UW7 1296 aa17.06■□□□□ 0.32
TRIM4-201ENST00000349062 MX1P20591 662 aa17.06■□□□□ 0.32
TRIM4-201ENST00000349062 UNC5CLQ8IV45 518 aa17.06■□□□□ 0.32
TRIM4-201ENST00000349062 FAM43AQ8N2R8 423 aa17.05■□□□□ 0.32
TRIM4-201ENST00000349062 LARP6Q9BRS8 491 aaKnown RBP17.05■□□□□ 0.32
TRIM4-201ENST00000349062 PXDNQ92626 1479 aa17.05■□□□□ 0.32
TRIM4-201ENST00000349062 ATP8B2P98198 1209 aa17.05■□□□□ 0.32
TRIM4-201ENST00000349062 DBF4Q9UBU7 674 aaPredicted RBP17.05■□□□□ 0.32
TRIM4-201ENST00000349062 GIGYF1O75420 1035 aaPredicted RBP17.05■□□□□ 0.32
TRIM4-201ENST00000349062 ZNF496Q96IT1 587 aaPredicted RBP17.05■□□□□ 0.32
TRIM4-201ENST00000349062 C1orf167Q5SNV9 1468 aa17.04■□□□□ 0.32
TRIM4-201ENST00000349062 CABP4P57796 275 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms