RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 ERVV-2B6SEH9 535 aa35.18■■■■□ 3.22
SSBP4-202ENST00000348495 MYT1Q01538 1121 aa35.18■■■■□ 3.22
SSBP4-202ENST00000348495 SEPT12Q8IYM1 358 aa35.18■■■■□ 3.22
SSBP4-202ENST00000348495 MIS18AQ9NYP9 233 aa35.16■■■■□ 3.22
SSBP4-202ENST00000348495 KDM3BQ7LBC6 1761 aa35.15■■■■□ 3.22
SSBP4-202ENST00000348495 NFATC2IPQ8NCF5 419 aa35.15■■■■□ 3.22
SSBP4-202ENST00000348495 TSPYL4Q9UJ04 414 aa35.15■■■■□ 3.22
SSBP4-202ENST00000348495 CABP4P57796 275 aa35.13■■■■□ 3.21
SSBP4-202ENST00000348495 POTEAQ6S8J7 498 aa35.12■■■■□ 3.21
SSBP4-202ENST00000348495 BTBD11A6QL63 1104 aa35.11■■■■□ 3.21
SSBP4-202ENST00000348495 RXRBP28702 533 aa35.11■■■■□ 3.21
SSBP4-202ENST00000348495 EXOSC9Q06265 439 aaKnown RBP35.1■■■■□ 3.21
SSBP4-202ENST00000348495 DOT1LQ8TEK3 1739 aa35.1■■■■□ 3.21
SSBP4-202ENST00000348495 ITGB4P16144 1822 aa35.09■■■■□ 3.21
SSBP4-202ENST00000348495 BCL9O00512 1426 aa35.08■■■■□ 3.21
SSBP4-202ENST00000348495 BRWD3Q6RI45 1802 aa35.07■■■■□ 3.2
SSBP4-202ENST00000348495 KCNQ3O43525 872 aa35.04■■■■□ 3.2
SSBP4-202ENST00000348495 TMOD3Q9NYL9 352 aa35.04■■■■□ 3.2
SSBP4-202ENST00000348495 PAPPAQ13219 1627 aa35.04■■■■□ 3.2
SSBP4-202ENST00000348495 CT47B1P0C2W7 299 aaPredicted RBP35.03■■■■□ 3.2
SSBP4-202ENST00000348495 C8orf58Q8NAV2 365 aa35.03■■■■□ 3.2
SSBP4-202ENST00000348495 ZNF790Q6PG37 636 aa35.02■■■■□ 3.2
SSBP4-202ENST00000348495 PIGBQ92521 554 aa35.02■■■■□ 3.2
SSBP4-202ENST00000348495 PRIM1P49642 420 aaKnown RBP35.01■■■■□ 3.2
SSBP4-202ENST00000348495 EIF4A1P60842 406 aaKnown RBP35.01■■■■□ 3.2
SSBP4-202ENST00000348495 TSPYL6Q8N831 410 aa35.01■■■■□ 3.2
SSBP4-202ENST00000348495 SLC39A6Q13433 755 aa35.01■■■■□ 3.19
SSBP4-202ENST00000348495 KRT24Q2M2I5 525 aa35.01■■■■□ 3.19
SSBP4-202ENST00000348495 RGS12O14924 1447 aa35■■■■□ 3.19
SSBP4-202ENST00000348495 RCAN3Q9UKA8 241 aa34.99■■■■□ 3.19
SSBP4-202ENST00000348495 HEG1Q9ULI3 1381 aa34.99■■■■□ 3.19
SSBP4-202ENST00000348495 KRT27Q7Z3Y8 459 aa34.98■■■■□ 3.19
SSBP4-202ENST00000348495 VAMP4O75379 141 aa34.98■■■■□ 3.19
SSBP4-202ENST00000348495 ACSBG1Q96GR2 724 aa34.98■■■■□ 3.19
SSBP4-202ENST00000348495 TWISTNBQ3B726 338 aaPredicted RBP34.97■■■■□ 3.19
SSBP4-202ENST00000348495 FAM182BQ5T319 152 aa34.97■■■■□ 3.19
SSBP4-202ENST00000348495 UBR2Q8IWV8 1755 aa34.97■■■■□ 3.19
SSBP4-202ENST00000348495 SYTL4Q96C24 671 aaPredicted RBP34.95■■■■□ 3.19
SSBP4-202ENST00000348495 KAT6BQ8WYB5 2073 aa34.95■■■■□ 3.19
SSBP4-202ENST00000348495 ELL2O00472 640 aaPredicted RBP34.95■■■■□ 3.18
SSBP4-202ENST00000348495 NHSQ6T4R5 1651 aa34.94■■■■□ 3.18
SSBP4-202ENST00000348495 SOS1Q07889 1333 aaPredicted RBP34.94■■■■□ 3.18
SSBP4-202ENST00000348495 KCPQ6ZWJ8 1503 aa34.93■■■■□ 3.18
SSBP4-202ENST00000348495 TTC5Q8N0Z6 440 aa34.93■■■■□ 3.18
SSBP4-202ENST00000348495 KCNQ2O43526 872 aa34.92■■■■□ 3.18
SSBP4-202ENST00000348495 ZNF428Q96B54 188 aa34.92■■■■□ 3.18
SSBP4-202ENST00000348495 ZNF496Q96IT1 587 aaPredicted RBP34.92■■■■□ 3.18
SSBP4-202ENST00000348495 ATG3Q9NT62 314 aa34.92■■■■□ 3.18
SSBP4-202ENST00000348495 SBF2Q86WG5 1849 aa34.92■■■■□ 3.18
SSBP4-202ENST00000348495 RARSP54136 660 aaKnown RBP34.91■■■■□ 3.18
SSBP4-202ENST00000348495 ASAP1Q9ULH1 1129 aa34.91■■■■□ 3.18
SSBP4-202ENST00000348495 GIGYF1O75420 1035 aaPredicted RBP34.89■■■■□ 3.18
SSBP4-202ENST00000348495 HOXB7P09629 217 aa34.89■■■■□ 3.18
SSBP4-202ENST00000348495 FAM196AQ6ZSG2 479 aa34.89■■■■□ 3.18
SSBP4-202ENST00000348495 FMNL2Q96PY5 1086 aa34.88■■■■□ 3.17
SSBP4-202ENST00000348495 PTF1AQ7RTS3 328 aa34.85■■■■□ 3.17
SSBP4-202ENST00000348495 RNF123Q5XPI4 1314 aa34.84■■■■□ 3.17
SSBP4-202ENST00000348495 ALDH1L2Q3SY69 923 aa34.84■■■■□ 3.17
SSBP4-202ENST00000348495 SSH1Q8WYL5 1049 aa34.84■■■■□ 3.17
SSBP4-202ENST00000348495 SUPT16HQ9Y5B9 1047 aaKnown RBP34.84■■■■□ 3.17
SSBP4-202ENST00000348495 C5P01031 1676 aa34.84■■■■□ 3.17
SSBP4-202ENST00000348495 BCAR3O75815 825 aa34.82■■■■□ 3.16
SSBP4-202ENST00000348495 BTAF1O14981 1849 aa34.82■■■■□ 3.16
SSBP4-202ENST00000348495 SNRPA1P09661 255 aaKnown RBP34.81■■■■□ 3.16
SSBP4-202ENST00000348495 PRAMEF22A3QJZ6 481 aa34.81■■■■□ 3.16
SSBP4-202ENST00000348495 PTCD1O75127 700 aaKnown RBP34.81■■■■□ 3.16
SSBP4-202ENST00000348495 BCL11BQ9C0K0 894 aaPredicted RBP34.79■■■■□ 3.16
SSBP4-202ENST00000348495 BRPF1P55201 1214 aaPredicted RBP34.78■■■■□ 3.16
SSBP4-202ENST00000348495 BCL2L13Q9BXK5 485 aa34.78■■■■□ 3.16
SSBP4-202ENST00000348495 VSIG10Q8N0Z9 540 aa34.78■■■■□ 3.16
SSBP4-202ENST00000348495 SMARCC1Q92922 1105 aaPredicted RBP34.78■■■■□ 3.16
SSBP4-202ENST00000348495 SMC4Q9NTJ3 1288 aa34.78■■■■□ 3.16
SSBP4-202ENST00000348495 HDGFL1Q5TGJ6 251 aa34.77■■■■□ 3.16
SSBP4-202ENST00000348495 LAMB4A4D0S4 1761 aa34.76■■■■□ 3.16
SSBP4-202ENST00000348495 PALLDQ8WX93 1383 aa34.76■■■■□ 3.16
SSBP4-202ENST00000348495 CCDC30Q5VVM6 783 aa34.76■■■■□ 3.16
SSBP4-202ENST00000348495 SLC4A9Q96Q91 983 aa34.75■■■■□ 3.15
SSBP4-202ENST00000348495 CHMP4AQ9BY43 222 aa34.75■■■■□ 3.15
SSBP4-202ENST00000348495 TCERG1O14776 1098 aaKnown RBP34.75■■■■□ 3.15
SSBP4-202ENST00000348495 MRPL50Q8N5N7 158 aaKnown RBP34.75■■■■□ 3.15
SSBP4-202ENST00000348495 EIF2S2P20042 333 aaKnown RBP34.73■■■■□ 3.15
SSBP4-202ENST00000348495 RRP1P56182 461 aaKnown RBP34.73■■■■□ 3.15
SSBP4-202ENST00000348495 CICQ96RK0 1608 aaPredicted RBP34.73■■■■□ 3.15
SSBP4-202ENST00000348495 RBM42Q9BTD8 480 aaKnown RBP34.72■■■■□ 3.15
SSBP4-202ENST00000348495 USP16Q9Y5T5 823 aa34.72■■■■□ 3.15
SSBP4-202ENST00000348495 EP400Q96L91 3159 aa34.72■■■■□ 3.15
SSBP4-202ENST00000348495 NECTIN2Q92692 538 aa34.72■■■■□ 3.15
SSBP4-202ENST00000348495 ZNF831Q5JPB2 1677 aa34.71■■■■□ 3.15
SSBP4-202ENST00000348495 TJP1Q07157 1748 aa34.7■■■■□ 3.15
SSBP4-202ENST00000348495 TRIM37O94972 964 aa34.69■■■■□ 3.14
SSBP4-202ENST00000348495 LOC102724428A0A0B4J2F2 783 aa34.69■■■■□ 3.14
SSBP4-202ENST00000348495 SIK1P57059 783 aa34.69■■■■□ 3.14
SSBP4-202ENST00000348495 TEX13AQ9BXU3 409 aaPredicted RBP34.69■■■■□ 3.14
SSBP4-202ENST00000348495 CACNA1FO60840 1977 aa34.68■■■■□ 3.14
SSBP4-202ENST00000348495 ILDR2Q71H61 639 aa34.68■■■■□ 3.14
SSBP4-202ENST00000348495 STK31Q9BXU1 1019 aa34.68■■■■□ 3.14
SSBP4-202ENST00000348495 SLC4A2P04920 1241 aa34.67■■■■□ 3.14
SSBP4-202ENST00000348495 DNAJC10Q8IXB1 793 aa34.67■■■■□ 3.14
SSBP4-202ENST00000348495 LY75O60449 1722 aa34.67■■■■□ 3.14
SSBP4-202ENST00000348495 KIF16BQ96L93 1317 aa34.67■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms