RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 APBB1IPQ7Z5R6 666 aaPredicted RBP13.81□□□□□ -0.2
TRAF3-201ENST00000347662 CCDC150Q8NCX0 1101 aa13.81□□□□□ -0.2
TRAF3-201ENST00000347662 TNNT1P13805 278 aa13.81□□□□□ -0.2
TRAF3-201ENST00000347662 CTNNA2P26232 953 aa13.81□□□□□ -0.2
TRAF3-201ENST00000347662 GNAI3P08754 354 aa13.81□□□□□ -0.2
TRAF3-201ENST00000347662 CCDC57Q2TAC2 916 aa13.8□□□□□ -0.2
TRAF3-201ENST00000347662 LARP1Q6PKG0 1096 aaKnown RBP13.8□□□□□ -0.2
TRAF3-201ENST00000347662 RAB3IL1Q8TBN0 382 aa13.8□□□□□ -0.2
TRAF3-201ENST00000347662 GIGYF2Q6Y7W6 1299 aaKnown RBP13.8□□□□□ -0.2
TRAF3-201ENST00000347662 TSPY26PQ9H489 355 aa13.8□□□□□ -0.2
TRAF3-201ENST00000347662 ZNF219Q9P2Y4 722 aaPredicted RBP13.8□□□□□ -0.2
TRAF3-201ENST00000347662 GRIN2AQ12879 1464 aa13.8□□□□□ -0.2
TRAF3-201ENST00000347662 PDE4AP27815 886 aa13.79□□□□□ -0.2
TRAF3-201ENST00000347662 MAP3K9P80192 1104 aa13.79□□□□□ -0.2
TRAF3-201ENST00000347662 TNIP1Q15025 636 aa13.79□□□□□ -0.2
TRAF3-201ENST00000347662 CCDC178Q5BJE1 867 aa13.79□□□□□ -0.2
TRAF3-201ENST00000347662 PRXQ9BXM0 1461 aa13.79□□□□□ -0.2
TRAF3-201ENST00000347662 TRIM22Q8IYM9 498 aa13.79□□□□□ -0.2
TRAF3-201ENST00000347662 BICRAQ9NZM4 1560 aa13.79□□□□□ -0.2
TRAF3-201ENST00000347662 CAVIN1Q6NZI2 390 aaKnown RBP13.79□□□□□ -0.2
TRAF3-201ENST00000347662 EIF5P55010 431 aaKnown RBP13.79□□□□□ -0.2
TRAF3-201ENST00000347662 CCDC158Q5M9N0 1113 aa13.79□□□□□ -0.2
TRAF3-201ENST00000347662 CFAP65Q6ZU64 1925 aaKnown RBP13.79□□□□□ -0.2
TRAF3-201ENST00000347662 KCNH5Q8NCM2 988 aa13.78□□□□□ -0.2
TRAF3-201ENST00000347662 PHF8Q9UPP1 1060 aa13.78□□□□□ -0.2
TRAF3-201ENST00000347662 TMOD3Q9NYL9 352 aa13.78□□□□□ -0.2
TRAF3-201ENST00000347662 ANKRD30BQ9BXX2 1392 aa13.78□□□□□ -0.2
TRAF3-201ENST00000347662 NOB1Q9ULX3 412 aaKnown RBP13.78□□□□□ -0.2
TRAF3-201ENST00000347662 LMAN1P49257 510 aa13.78□□□□□ -0.2
TRAF3-201ENST00000347662 IFFO1Q0D2I5 559 aa13.78□□□□□ -0.2
TRAF3-201ENST00000347662 RPGRIP1LQ68CZ1 1315 aa13.78□□□□□ -0.2
TRAF3-201ENST00000347662 ME1P48163 572 aa13.78□□□□□ -0.2
TRAF3-201ENST00000347662 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.78□□□□□ -0.2
TRAF3-201ENST00000347662 UBA5Q9GZZ9 404 aa13.78□□□□□ -0.2
TRAF3-201ENST00000347662 SH3BP5O60239 455 aa13.78□□□□□ -0.2
TRAF3-201ENST00000347662 ZPR1O75312 459 aa13.78□□□□□ -0.2
TRAF3-201ENST00000347662 STARD3NLO95772 234 aa13.78□□□□□ -0.2
TRAF3-201ENST00000347662 TSNARE1Q96NA8 513 aa13.78□□□□□ -0.2
TRAF3-201ENST00000347662 DMRT2Q9Y5R5 561 aa13.78□□□□□ -0.2
TRAF3-201ENST00000347662 FKBP4Q02790 459 aaKnown RBP eCLIP13.77□□□□□ -0.2
TRAF3-201ENST00000347662 MPNDQ8N594 471 aa13.77□□□□□ -0.2
TRAF3-201ENST00000347662 ZNF397Q8NF99 534 aaPredicted RBP13.77□□□□□ -0.2
TRAF3-201ENST00000347662 GNAI2P04899 355 aa13.77□□□□□ -0.2
TRAF3-201ENST00000347662 PPP1R12BO60237 982 aaPredicted RBP13.77□□□□□ -0.21
TRAF3-201ENST00000347662 DNA2P51530 1060 aa13.77□□□□□ -0.21
TRAF3-201ENST00000347662 FIBPO43427 364 aa13.77□□□□□ -0.21
TRAF3-201ENST00000347662 JMYQ8N9B5 988 aa13.77□□□□□ -0.21
TRAF3-201ENST00000347662 THUMPD2Q9BTF0 503 aaKnown RBP13.77□□□□□ -0.21
TRAF3-201ENST00000347662 CCDC141Q6ZP82 1450 aa13.77□□□□□ -0.21
TRAF3-201ENST00000347662 HSPA2P54652 639 aa13.77□□□□□ -0.21
TRAF3-201ENST00000347662 CHRNA2Q15822 529 aa13.77□□□□□ -0.21
TRAF3-201ENST00000347662 NOL7Q9UMY1 257 aaKnown RBP13.77□□□□□ -0.21
TRAF3-201ENST00000347662 TMCO3Q6UWJ1 677 aa13.76□□□□□ -0.21
TRAF3-201ENST00000347662 MTERF4Q7Z6M4 381 aaKnown RBP13.76□□□□□ -0.21
TRAF3-201ENST00000347662 NME9Q86XW9 330 aa13.76□□□□□ -0.21
TRAF3-201ENST00000347662 MAP4K4O95819 1239 aaPredicted RBP13.76□□□□□ -0.21
TRAF3-201ENST00000347662 GRM1Q13255 1194 aa13.76□□□□□ -0.21
TRAF3-201ENST00000347662 KRT28Q7Z3Y7 464 aa13.76□□□□□ -0.21
TRAF3-201ENST00000347662 KIF14Q15058 1648 aa13.76□□□□□ -0.21
TRAF3-201ENST00000347662 ATAD2Q6PL18 1390 aa13.76□□□□□ -0.21
TRAF3-201ENST00000347662 MCM10Q7L590 875 aa13.76□□□□□ -0.21
TRAF3-201ENST00000347662 CEP57L1Q8IYX8 460 aa13.75□□□□□ -0.21
TRAF3-201ENST00000347662 NACAP1Q9BZK3 213 aa13.75□□□□□ -0.21
TRAF3-201ENST00000347662 LRSAM1Q6UWE0 723 aa13.75□□□□□ -0.21
TRAF3-201ENST00000347662 TIAM1Q13009 1591 aa13.75□□□□□ -0.21
TRAF3-201ENST00000347662 ABCA10Q8WWZ4 1543 aa13.75□□□□□ -0.21
TRAF3-201ENST00000347662 CCDC148Q8NFR7 591 aa13.75□□□□□ -0.21
TRAF3-201ENST00000347662 TRMT1LQ7Z2T5 733 aaKnown RBP13.75□□□□□ -0.21
TRAF3-201ENST00000347662 RNF187Q5TA31 235 aaPredicted RBP13.75□□□□□ -0.21
TRAF3-201ENST00000347662 PNISRQ8TF01 805 aaKnown RBP13.75□□□□□ -0.21
TRAF3-201ENST00000347662 GNAT3A8MTJ3 354 aa13.74□□□□□ -0.21
TRAF3-201ENST00000347662 GCOM1H8Y6P7 765 aaPredicted RBP13.74□□□□□ -0.21
TRAF3-201ENST00000347662 MYZAPP0CAP1 466 aa13.74□□□□□ -0.21
TRAF3-201ENST00000347662 DHX8Q14562 1220 aaKnown RBP13.74□□□□□ -0.21
TRAF3-201ENST00000347662 FANCAO15360 1455 aa13.74□□□□□ -0.21
TRAF3-201ENST00000347662 TNMDQ9H2S6 317 aa13.74□□□□□ -0.21
TRAF3-201ENST00000347662 OTUD6BQ8N6M0 293 aa13.74□□□□□ -0.21
TRAF3-201ENST00000347662 SRCIN1Q9C0H9 1055 aa13.74□□□□□ -0.21
TRAF3-201ENST00000347662 NSD3Q9BZ95 1437 aa13.74□□□□□ -0.21
TRAF3-201ENST00000347662 DZIP1Q86YF9 867 aaKnown RBP13.74□□□□□ -0.21
TRAF3-201ENST00000347662 VTI1AQ96AJ9 217 aa13.74□□□□□ -0.21
TRAF3-201ENST00000347662 TMOD2Q9NZR1 351 aa13.74□□□□□ -0.21
TRAF3-201ENST00000347662 BCAR3O75815 825 aa13.73□□□□□ -0.21
TRAF3-201ENST00000347662 DAAM2Q86T65 1068 aa13.73□□□□□ -0.21
TRAF3-201ENST00000347662 SHTN1A0MZ66 631 aa13.73□□□□□ -0.21
TRAF3-201ENST00000347662 EXOC5O00471 708 aa13.73□□□□□ -0.21
TRAF3-201ENST00000347662 BBXQ8WY36 941 aaPredicted RBP13.73□□□□□ -0.21
TRAF3-201ENST00000347662 DENND4BO75064 1496 aaPredicted RBP13.73□□□□□ -0.21
TRAF3-201ENST00000347662 PSMC4P43686 418 aa13.73□□□□□ -0.21
TRAF3-201ENST00000347662 ABCF2Q9UG63 623 aa13.73□□□□□ -0.21
TRAF3-201ENST00000347662 BRD4O60885 1362 aaPredicted RBP13.73□□□□□ -0.21
TRAF3-201ENST00000347662 CCDC160A6NGH7 325 aa13.73□□□□□ -0.21
TRAF3-201ENST00000347662 CBFA2T2O43439 604 aa13.73□□□□□ -0.21
TRAF3-201ENST00000347662 PRPF40AO75400 957 aaKnown RBP13.73□□□□□ -0.21
TRAF3-201ENST00000347662 PPP1R14CQ8TAE6 165 aa13.73□□□□□ -0.21
TRAF3-201ENST00000347662 URB2Q14146 1524 aaKnown RBP13.73□□□□□ -0.21
TRAF3-201ENST00000347662 SLU7O95391 586 aaKnown RBP13.73□□□□□ -0.21
TRAF3-201ENST00000347662 CRACR2AQ9BSW2 395 aa13.73□□□□□ -0.21
TRAF3-201ENST00000347662 TDO2P48775 406 aa13.72□□□□□ -0.21
TRAF3-201ENST00000347662 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms