RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 CAMK4Q16566 473 aa18.38■□□□□ 0.53
LMNA-201ENST00000347559 KNDC1Q76NI1 1749 aa18.38■□□□□ 0.53
LMNA-201ENST00000347559 NRBP1Q9UHY1 535 aa18.38■□□□□ 0.53
LMNA-201ENST00000347559 MSH6P52701 1360 aa18.38■□□□□ 0.53
LMNA-201ENST00000347559 TRERF1Q96PN7 1200 aa18.38■□□□□ 0.53
LMNA-201ENST00000347559 LUZP1Q86V48 1076 aa18.37■□□□□ 0.53
LMNA-201ENST00000347559 SMTNL1A8MU46 457 aa18.37■□□□□ 0.53
LMNA-201ENST00000347559 STX6O43752 255 aa18.37■□□□□ 0.53
LMNA-201ENST00000347559 SYT1P21579 422 aa18.37■□□□□ 0.53
LMNA-201ENST00000347559 DNM1Q05193 864 aaKnown RBP18.37■□□□□ 0.53
LMNA-201ENST00000347559 HMMRO75330 724 aa18.36■□□□□ 0.53
LMNA-201ENST00000347559 CCDC192P0DO97 292 aa18.36■□□□□ 0.53
LMNA-201ENST00000347559 TPD52L1Q16890 204 aaPredicted RBP18.36■□□□□ 0.53
LMNA-201ENST00000347559 FUCA2Q9BTY2 467 aa18.36■□□□□ 0.53
LMNA-201ENST00000347559 LRRC7Q96NW7 1537 aa18.36■□□□□ 0.53
LMNA-201ENST00000347559 RTL1A6NKG5 1358 aa18.36■□□□□ 0.53
LMNA-201ENST00000347559 TMEM87AQ8NBN3 555 aa18.36■□□□□ 0.53
LMNA-201ENST00000347559 KIF1BO60333 1816 aa18.36■□□□□ 0.53
LMNA-201ENST00000347559 CHMLP26374 656 aa18.36■□□□□ 0.53
LMNA-201ENST00000347559 RPAP1Q9BWH6 1393 aaPredicted RBP18.35■□□□□ 0.53
LMNA-201ENST00000347559 CCDC66A2RUB6 948 aa18.35■□□□□ 0.53
LMNA-201ENST00000347559 ZNF853P0CG23 659 aa18.35■□□□□ 0.53
LMNA-201ENST00000347559 TERF2Q15554 542 aa18.35■□□□□ 0.53
LMNA-201ENST00000347559 KIF18AQ8NI77 898 aa18.35■□□□□ 0.53
LMNA-201ENST00000347559 TULP4Q9NRJ4 1543 aa18.35■□□□□ 0.53
LMNA-201ENST00000347559 NPHP1O15259 732 aa18.35■□□□□ 0.53
LMNA-201ENST00000347559 TRIM5Q9C035 493 aa18.35■□□□□ 0.53
LMNA-201ENST00000347559 SMC3Q9UQE7 1217 aa18.35■□□□□ 0.53
LMNA-201ENST00000347559 RGS12O14924 1447 aa18.35■□□□□ 0.53
LMNA-201ENST00000347559 F13A1P00488 732 aa18.34■□□□□ 0.53
LMNA-201ENST00000347559 ANAPC15P60006 121 aa18.34■□□□□ 0.53
LMNA-201ENST00000347559 KRT222Q8N1A0 295 aa18.34■□□□□ 0.53
LMNA-201ENST00000347559 POLKQ9UBT6 870 aa18.34■□□□□ 0.53
LMNA-201ENST00000347559 MROH2AA6NES4 1674 aa18.34■□□□□ 0.53
LMNA-201ENST00000347559 HDGFL2Q7Z4V5 671 aaPredicted RBP18.34■□□□□ 0.53
LMNA-201ENST00000347559 CKAP2LQ8IYA6 745 aa18.34■□□□□ 0.53
LMNA-201ENST00000347559 FAM135BQ49AJ0 1406 aa18.33■□□□□ 0.53
LMNA-201ENST00000347559 NRXN1Q9ULB1 1477 aa18.33■□□□□ 0.53
LMNA-201ENST00000347559 VPS37CA5D8V6 355 aaPredicted RBP18.33■□□□□ 0.53
LMNA-201ENST00000347559 MAP4K4O95819 1239 aaPredicted RBP18.33■□□□□ 0.53
LMNA-201ENST00000347559 IPO4Q8TEX9 1081 aaKnown RBP18.33■□□□□ 0.53
LMNA-201ENST00000347559 CFAP65Q6ZU64 1925 aaKnown RBP18.33■□□□□ 0.52
LMNA-201ENST00000347559 ABCC1P33527 1531 aa18.33■□□□□ 0.52
LMNA-201ENST00000347559 UNC5CLQ8IV45 518 aa18.33■□□□□ 0.52
LMNA-201ENST00000347559 RTF1Q92541 710 aaKnown RBP18.33■□□□□ 0.52
LMNA-201ENST00000347559 EMILIN1Q9Y6C2 1016 aa18.33■□□□□ 0.52
LMNA-201ENST00000347559 F6X3S4 739 aa18.32■□□□□ 0.52
LMNA-201ENST00000347559 TIGD1Q96MW7 591 aa18.32■□□□□ 0.52
LMNA-201ENST00000347559 IL25Q9H293 177 aa18.32■□□□□ 0.52
LMNA-201ENST00000347559 ST7Q9NRC1 585 aa18.32■□□□□ 0.52
LMNA-201ENST00000347559 MORC2Q9Y6X9 1032 aaPredicted RBP18.32■□□□□ 0.52
LMNA-201ENST00000347559 INO80Q9ULG1 1556 aaPredicted RBP18.32■□□□□ 0.52
LMNA-201ENST00000347559 ATP6V1DQ9Y5K8 247 aa18.32■□□□□ 0.52
LMNA-201ENST00000347559 CPA1P15085 419 aa18.32■□□□□ 0.52
LMNA-201ENST00000347559 FAM200AQ8TCP9 573 aa18.32■□□□□ 0.52
LMNA-201ENST00000347559 GGT6Q6P531 493 aa18.31■□□□□ 0.52
LMNA-201ENST00000347559 ARHGEF40Q8TER5 1519 aa18.31■□□□□ 0.52
LMNA-201ENST00000347559 PUS7Q96PZ0 661 aaKnown RBP18.31■□□□□ 0.52
LMNA-201ENST00000347559 OSBPL3Q9H4L5 887 aa18.31■□□□□ 0.52
LMNA-201ENST00000347559 CABP1Q9NZU7 370 aa18.31■□□□□ 0.52
LMNA-201ENST00000347559 AK2P54819 239 aa18.3■□□□□ 0.52
LMNA-201ENST00000347559 ADGRB1O14514 1584 aa18.3■□□□□ 0.52
LMNA-201ENST00000347559 SETBP1Q9Y6X0 1596 aa18.3■□□□□ 0.52
LMNA-201ENST00000347559 KMT5BQ4FZB7 885 aa18.3■□□□□ 0.52
LMNA-201ENST00000347559 ZSCAN25Q6NSZ9 544 aa18.3■□□□□ 0.52
LMNA-201ENST00000347559 KIF24Q5T7B8 1368 aa18.3■□□□□ 0.52
LMNA-201ENST00000347559 PNPLA6Q8IY17 1366 aa18.3■□□□□ 0.52
LMNA-201ENST00000347559 CCDC83Q8IWF9 413 aa18.29■□□□□ 0.52
LMNA-201ENST00000347559 PAXBP1Q9Y5B6 917 aa18.29■□□□□ 0.52
LMNA-201ENST00000347559 ZFYVE16Q7Z3T8 1539 aa18.29■□□□□ 0.52
LMNA-201ENST00000347559 ZC3H13Q5T200 1668 aaKnown RBP18.29■□□□□ 0.52
LMNA-201ENST00000347559 SLC4A2P04920 1241 aa18.29■□□□□ 0.52
LMNA-201ENST00000347559 CEP135Q66GS9 1140 aa18.29■□□□□ 0.52
LMNA-201ENST00000347559 LRRCC1Q9C099 1032 aa18.29■□□□□ 0.52
LMNA-201ENST00000347559 ZNF215Q9UL58 517 aaPredicted RBP18.29■□□□□ 0.52
LMNA-201ENST00000347559 TYRO3Q06418 890 aa18.29■□□□□ 0.52
LMNA-201ENST00000347559 SYCP1Q15431 976 aa18.29■□□□□ 0.52
LMNA-201ENST00000347559 MAP3K11Q16584 847 aa18.29■□□□□ 0.52
LMNA-201ENST00000347559 FERMT3Q86UX7 667 aa18.29■□□□□ 0.52
LMNA-201ENST00000347559 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.29■□□□□ 0.52
LMNA-201ENST00000347559 LMOD3Q0VAK6 560 aa18.28■□□□□ 0.52
LMNA-201ENST00000347559 ANO6Q4KMQ2 910 aa18.28■□□□□ 0.52
LMNA-201ENST00000347559 CHMP4AQ9BY43 222 aa18.28■□□□□ 0.52
LMNA-201ENST00000347559 NUP62CLQ9H1M0 184 aa18.28■□□□□ 0.52
LMNA-201ENST00000347559 MRVI1Q9Y6F6 885 aa18.28■□□□□ 0.52
LMNA-201ENST00000347559 GJB2P29033 226 aa18.27■□□□□ 0.52
LMNA-201ENST00000347559 FAM173BQ6P4H8 233 aa18.27■□□□□ 0.52
LMNA-201ENST00000347559 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.27■□□□□ 0.52
LMNA-201ENST00000347559 ZNF397Q8NF99 534 aaPredicted RBP18.27■□□□□ 0.52
LMNA-201ENST00000347559 CACTINQ8WUQ7 758 aaKnown RBP18.27■□□□□ 0.52
LMNA-201ENST00000347559 CBX8Q9HC52 389 aa18.27■□□□□ 0.52
LMNA-201ENST00000347559 IL1RAPL2Q9NP60 686 aa18.27■□□□□ 0.52
LMNA-201ENST00000347559 LIG1P18858 919 aa18.27■□□□□ 0.51
LMNA-201ENST00000347559 ELF2Q15723 593 aa18.27■□□□□ 0.51
LMNA-201ENST00000347559 RUFY3Q7L099 469 aa18.27■□□□□ 0.51
LMNA-201ENST00000347559 DDX54Q8TDD1 881 aaKnown RBP18.27■□□□□ 0.51
LMNA-201ENST00000347559 PRAM1Q96QH2 718 aa18.27■□□□□ 0.51
LMNA-201ENST00000347559 CLIP2Q9UDT6 1046 aa18.27■□□□□ 0.51
LMNA-201ENST00000347559 LIMCH1Q9UPQ0 1083 aa18.27■□□□□ 0.51
LMNA-201ENST00000347559 LARGE1O95461 756 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms