RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 PROSER3Q2NL68 480 aa16.24■□□□□ 0.19
CASC4-202ENST00000345795 PLEKHM2Q8IWE5 1019 aa16.24■□□□□ 0.19
CASC4-202ENST00000345795 DIP2CQ9Y2E4 1556 aa16.24■□□□□ 0.19
CASC4-202ENST00000345795 CD2BP2O95400 341 aaKnown RBP16.23■□□□□ 0.19
CASC4-202ENST00000345795 PTMAP06454 111 aaKnown RBP16.23■□□□□ 0.19
CASC4-202ENST00000345795 DNAAF4Q8WXU2 420 aa16.23■□□□□ 0.19
CASC4-202ENST00000345795 PUS7Q96PZ0 661 aaKnown RBP16.23■□□□□ 0.19
CASC4-202ENST00000345795 VPS37CA5D8V6 355 aaPredicted RBP16.23■□□□□ 0.19
CASC4-202ENST00000345795 PRPF40AO75400 957 aaKnown RBP16.23■□□□□ 0.19
CASC4-202ENST00000345795 GPTP24298 496 aa16.23■□□□□ 0.19
CASC4-202ENST00000345795 UBE3BQ7Z3V4 1068 aa16.23■□□□□ 0.19
CASC4-202ENST00000345795 RPAP2Q8IXW5 612 aaPredicted RBP16.23■□□□□ 0.19
CASC4-202ENST00000345795 NAP1L5Q96NT1 182 aaPredicted RBP16.23■□□□□ 0.19
CASC4-202ENST00000345795 CAVIN1Q6NZI2 390 aaKnown RBP16.22■□□□□ 0.19
CASC4-202ENST00000345795 FSD1Q9BTV5 496 aa16.22■□□□□ 0.19
CASC4-202ENST00000345795 FBXW7Q969H0 707 aa16.22■□□□□ 0.19
CASC4-202ENST00000345795 BCL11BQ9C0K0 894 aaPredicted RBP16.22■□□□□ 0.19
CASC4-202ENST00000345795 AXIN2Q9Y2T1 843 aa16.22■□□□□ 0.19
CASC4-202ENST00000345795 PLEKHG3A1L390 1219 aa16.21■□□□□ 0.19
CASC4-202ENST00000345795 GSPT1P15170 499 aaKnown RBP16.21■□□□□ 0.19
CASC4-202ENST00000345795 COPS6Q7L5N1 327 aa16.21■□□□□ 0.19
CASC4-202ENST00000345795 ZGPATQ8N5A5 531 aaKnown RBP16.21■□□□□ 0.19
CASC4-202ENST00000345795 ALKQ9UM73 1620 aa16.21■□□□□ 0.19
CASC4-202ENST00000345795 DDX58O95786 925 aaKnown RBP16.21■□□□□ 0.18
CASC4-202ENST00000345795 ANKRD44Q8N8A2 993 aa16.21■□□□□ 0.18
CASC4-202ENST00000345795 QRICH2Q9H0J4 1663 aa16.2■□□□□ 0.18
CASC4-202ENST00000345795 KCNH5Q8NCM2 988 aa16.2■□□□□ 0.18
CASC4-202ENST00000345795 TOMM22Q9NS69 142 aa16.2■□□□□ 0.18
CASC4-202ENST00000345795 MCM4P33991 863 aa16.2■□□□□ 0.18
CASC4-202ENST00000345795 K7ELQ4 463 aaPredicted RBP16.2■□□□□ 0.18
CASC4-202ENST00000345795 ERC2O15083 957 aa16.2■□□□□ 0.18
CASC4-202ENST00000345795 XAGE3Q8WTP9 111 aa16.2■□□□□ 0.18
CASC4-202ENST00000345795 BMP2KLQ5H9B9 411 aa16.19■□□□□ 0.18
CASC4-202ENST00000345795 TTC22Q5TAA0 569 aa16.19■□□□□ 0.18
CASC4-202ENST00000345795 PHF23Q9BUL5 403 aaPredicted RBP16.19■□□□□ 0.18
CASC4-202ENST00000345795 PANK2Q9BZ23 570 aa16.19■□□□□ 0.18
CASC4-202ENST00000345795 SNRKQ9NRH2 765 aa16.19■□□□□ 0.18
CASC4-202ENST00000345795 PTPRMP28827 1452 aa16.19■□□□□ 0.18
CASC4-202ENST00000345795 PDE1AP54750 535 aa16.18■□□□□ 0.18
CASC4-202ENST00000345795 FERMT3Q86UX7 667 aa16.18■□□□□ 0.18
CASC4-202ENST00000345795 EDC3Q96F86 508 aaKnown RBP16.18■□□□□ 0.18
CASC4-202ENST00000345795 AAMPQ13685 434 aa16.18■□□□□ 0.18
CASC4-202ENST00000345795 TNPO1Q92973 898 aaKnown RBP16.18■□□□□ 0.18
CASC4-202ENST00000345795 CEBPZQ03701 1054 aaKnown RBP16.17■□□□□ 0.18
CASC4-202ENST00000345795 ARAP3Q8WWN8 1544 aa16.17■□□□□ 0.18
CASC4-202ENST00000345795 MROH1Q8NDA8 1641 aa16.17■□□□□ 0.18
CASC4-202ENST00000345795 NEXMIFQ5QGS0 1516 aa16.17■□□□□ 0.18
CASC4-202ENST00000345795 GPATCH3Q96I76 525 aa16.17■□□□□ 0.18
CASC4-202ENST00000345795 CAMSAP1Q5T5Y3 1602 aa16.17■□□□□ 0.18
CASC4-202ENST00000345795 ADGRB1O14514 1584 aa16.17■□□□□ 0.18
CASC4-202ENST00000345795 DCTPP1Q9H773 170 aa16.17■□□□□ 0.18
CASC4-202ENST00000345795 HSP90AB3PQ58FF7 597 aa16.16■□□□□ 0.18
CASC4-202ENST00000345795 TTC21AQ8NDW8 1320 aa16.16■□□□□ 0.18
CASC4-202ENST00000345795 GTF2E1P29083 439 aaPredicted RBP16.16■□□□□ 0.18
CASC4-202ENST00000345795 CPS1P31327 1500 aa16.16■□□□□ 0.18
CASC4-202ENST00000345795 A0A087WZG4 1122 aa16.16■□□□□ 0.18
CASC4-202ENST00000345795 FKBP4Q02790 459 aaKnown RBP eCLIP16.16■□□□□ 0.18
CASC4-202ENST00000345795 RAB11FIP4Q86YS3 637 aa16.16■□□□□ 0.18
CASC4-202ENST00000345795 UNC5CLQ8IV45 518 aa16.16■□□□□ 0.18
CASC4-202ENST00000345795 ZFYVE9O95405 1425 aa16.16■□□□□ 0.18
CASC4-202ENST00000345795 FIBPO43427 364 aa16.15■□□□□ 0.18
CASC4-202ENST00000345795 PKP1Q13835 747 aa16.15■□□□□ 0.18
CASC4-202ENST00000345795 IP6K1Q92551 441 aa16.15■□□□□ 0.18
CASC4-202ENST00000345795 PRPF40BQ6NWY9 871 aaKnown RBP16.15■□□□□ 0.18
CASC4-202ENST00000345795 BICDL1Q6ZP65 573 aa16.15■□□□□ 0.18
CASC4-202ENST00000345795 ACSBG1Q96GR2 724 aa16.15■□□□□ 0.18
CASC4-202ENST00000345795 APPP05067 770 aa16.15■□□□□ 0.18
CASC4-202ENST00000345795 DBF4Q9UBU7 674 aaPredicted RBP16.15■□□□□ 0.18
CASC4-202ENST00000345795 GOLGA6L4A6NEF3 574 aa16.14■□□□□ 0.18
CASC4-202ENST00000345795 LRRC2Q9BYS8 371 aa16.14■□□□□ 0.18
CASC4-202ENST00000345795 USP16Q9Y5T5 823 aa16.14■□□□□ 0.18
CASC4-202ENST00000345795 PIK3C2BO00750 1634 aa16.14■□□□□ 0.17
CASC4-202ENST00000345795 WASHC4Q2M389 1173 aa16.14■□□□□ 0.17
CASC4-202ENST00000345795 RHPN1Q8TCX5 695 aa16.14■□□□□ 0.17
CASC4-202ENST00000345795 ARHGAP45Q92619 1136 aa16.14■□□□□ 0.17
CASC4-202ENST00000345795 USP6P35125 1406 aa16.14■□□□□ 0.17
CASC4-202ENST00000345795 RIMBP3CA6NJZ7 1639 aa16.14■□□□□ 0.17
CASC4-202ENST00000345795 RIMBP3BA6NNM3 1639 aa16.14■□□□□ 0.17
CASC4-202ENST00000345795 RIMBP3Q9UFD9 1639 aa16.14■□□□□ 0.17
CASC4-202ENST00000345795 ZNF496Q96IT1 587 aaPredicted RBP16.13■□□□□ 0.17
CASC4-202ENST00000345795 RBM27Q9P2N5 1060 aaKnown RBP16.13■□□□□ 0.17
CASC4-202ENST00000345795 USP44Q9H0E7 712 aa16.13■□□□□ 0.17
CASC4-202ENST00000345795 PTPRCP08575 1304 aa16.13■□□□□ 0.17
CASC4-202ENST00000345795 A1BGP04217 495 aa16.12■□□□□ 0.17
CASC4-202ENST00000345795 MAP3K5Q99683 1374 aa16.12■□□□□ 0.17
CASC4-202ENST00000345795 ARHGAP31Q2M1Z3 1444 aa16.12■□□□□ 0.17
CASC4-202ENST00000345795 DNTTIP2Q5QJE6 756 aaKnown RBP16.12■□□□□ 0.17
CASC4-202ENST00000345795 CNTROBQ8N137 903 aa16.12■□□□□ 0.17
CASC4-202ENST00000345795 JAKMIP1Q96N16 626 aaKnown RBP16.12■□□□□ 0.17
CASC4-202ENST00000345795 C19orf44Q9H6X5 657 aa16.12■□□□□ 0.17
CASC4-202ENST00000345795 CLTCQ00610 1675 aaKnown RBP16.12■□□□□ 0.17
CASC4-202ENST00000345795 SBNO1A3KN83 1393 aa16.12■□□□□ 0.17
CASC4-202ENST00000345795 CASTP20810 708 aaKnown RBP16.12■□□□□ 0.17
CASC4-202ENST00000345795 DDX46Q7L014 1031 aaKnown RBP16.12■□□□□ 0.17
CASC4-202ENST00000345795 IQGAP1P46940 1657 aa16.11■□□□□ 0.17
CASC4-202ENST00000345795 ZNF853P0CG23 659 aa16.11■□□□□ 0.17
CASC4-202ENST00000345795 ARHGEF40Q8TER5 1519 aa16.11■□□□□ 0.17
CASC4-202ENST00000345795 RNMTO43148 476 aaKnown RBP16.11■□□□□ 0.17
CASC4-202ENST00000345795 DDX11Q96FC9 970 aa16.1■□□□□ 0.17
CASC4-202ENST00000345795 NECAB1Q8N987 351 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms