RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 EIF4A2Q14240 407 aaKnown RBP21.64■■□□□ 1.06
VHL-202ENST00000345392 TPRNQ4KMQ1 711 aa21.64■■□□□ 1.06
VHL-202ENST00000345392 MAP7D2Q96T17 732 aa21.64■■□□□ 1.06
VHL-202ENST00000345392 TSPY26PQ9H489 355 aa21.64■■□□□ 1.06
VHL-202ENST00000345392 EXOC6BQ9Y2D4 811 aa21.64■■□□□ 1.05
VHL-202ENST00000345392 F6X3S4 739 aa21.63■■□□□ 1.05
VHL-202ENST00000345392 SLC4A2P04920 1241 aa21.63■■□□□ 1.05
VHL-202ENST00000345392 DLC1Q96QB1 1528 aa21.63■■□□□ 1.05
VHL-202ENST00000345392 GADD45BO75293 160 aaPredicted RBP21.63■■□□□ 1.05
VHL-202ENST00000345392 SASS6Q6UVJ0 657 aa21.63■■□□□ 1.05
VHL-202ENST00000345392 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.63■■□□□ 1.05
VHL-202ENST00000345392 DYNC1I1O14576 645 aa21.63■■□□□ 1.05
VHL-202ENST00000345392 PPP6R1Q9UPN7 881 aa21.63■■□□□ 1.05
VHL-202ENST00000345392 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.63■■□□□ 1.05
VHL-202ENST00000345392 FER1L4A9Z1Z3 1794 aa21.62■■□□□ 1.05
VHL-202ENST00000345392 HSP90AB2PQ58FF8 381 aa21.62■■□□□ 1.05
VHL-202ENST00000345392 JARID2Q92833 1246 aaPredicted RBP21.62■■□□□ 1.05
VHL-202ENST00000345392 ZNF830Q96NB3 372 aaPredicted RBP21.62■■□□□ 1.05
VHL-202ENST00000345392 NRXN3Q9Y4C0 1643 aa21.61■■□□□ 1.05
VHL-202ENST00000345392 UPF3BQ9BZI7 483 aaKnown RBP21.61■■□□□ 1.05
VHL-202ENST00000345392 ANO2Q9NQ90 1003 aa21.61■■□□□ 1.05
VHL-202ENST00000345392 CHL1O00533 1208 aa21.6■■□□□ 1.05
VHL-202ENST00000345392 RILPL2Q969X0 211 aa21.6■■□□□ 1.05
VHL-202ENST00000345392 ESYT1Q9BSJ8 1104 aa21.6■■□□□ 1.05
VHL-202ENST00000345392 FOXO3O43524 673 aa21.6■■□□□ 1.05
VHL-202ENST00000345392 HMMRO75330 724 aa21.6■■□□□ 1.05
VHL-202ENST00000345392 CUL4AQ13619 759 aa21.6■■□□□ 1.05
VHL-202ENST00000345392 DNTTIP2Q5QJE6 756 aaKnown RBP21.6■■□□□ 1.05
VHL-202ENST00000345392 G2E3Q7L622 706 aa21.6■■□□□ 1.05
VHL-202ENST00000345392 AATKQ6ZMQ8 1374 aa21.59■■□□□ 1.05
VHL-202ENST00000345392 OSBPL3Q9H4L5 887 aa21.59■■□□□ 1.05
VHL-202ENST00000345392 RIMS1Q86UR5 1692 aaKnown RBP21.59■■□□□ 1.05
VHL-202ENST00000345392 KIAA2012Q0VF49 1180 aa21.59■■□□□ 1.05
VHL-202ENST00000345392 PTPRCP08575 1304 aa21.58■■□□□ 1.05
VHL-202ENST00000345392 TRIM6-TRIM34B2RNG4 842 aa21.58■■□□□ 1.05
VHL-202ENST00000345392 USP48Q86UV5 1035 aa21.58■■□□□ 1.04
VHL-202ENST00000345392 PRDM4Q9UKN5 801 aa21.58■■□□□ 1.04
VHL-202ENST00000345392 SPATA31D1Q6ZQQ2 1576 aa21.57■■□□□ 1.04
VHL-202ENST00000345392 MCM2P49736 904 aa21.57■■□□□ 1.04
VHL-202ENST00000345392 TSC1Q92574 1164 aa21.57■■□□□ 1.04
VHL-202ENST00000345392 ROBO2Q9HCK4 1378 aa21.56■■□□□ 1.04
VHL-202ENST00000345392 SYAP1Q96A49 352 aaPredicted RBP21.56■■□□□ 1.04
VHL-202ENST00000345392 MCCP23508 829 aa21.56■■□□□ 1.04
VHL-202ENST00000345392 HAP1P54257 671 aaPredicted RBP21.56■■□□□ 1.04
VHL-202ENST00000345392 ACEP12821 1306 aa21.56■■□□□ 1.04
VHL-202ENST00000345392 USP25Q9UHP3 1055 aa21.55■■□□□ 1.04
VHL-202ENST00000345392 C17orf53Q8N3J3 647 aaPredicted RBP21.55■■□□□ 1.04
VHL-202ENST00000345392 TTC21BQ7Z4L5 1316 aa21.55■■□□□ 1.04
VHL-202ENST00000345392 CHMLP26374 656 aa21.54■■□□□ 1.04
VHL-202ENST00000345392 INTS4Q96HW7 963 aaKnown RBP21.54■■□□□ 1.04
VHL-202ENST00000345392 PRDM10Q9NQV6 1147 aa21.54■■□□□ 1.04
VHL-202ENST00000345392 UNC5CLQ8IV45 518 aa21.53■■□□□ 1.04
VHL-202ENST00000345392 C3P01024 1663 aa21.53■■□□□ 1.04
VHL-202ENST00000345392 MX1P20591 662 aa21.53■■□□□ 1.04
VHL-202ENST00000345392 TTC12Q9H892 705 aaPredicted RBP21.53■■□□□ 1.04
VHL-202ENST00000345392 MON2Q7Z3U7 1717 aa21.53■■□□□ 1.04
VHL-202ENST00000345392 NECTIN2Q92692 538 aa21.52■■□□□ 1.04
VHL-202ENST00000345392 LRRCC1Q9C099 1032 aa21.52■■□□□ 1.04
VHL-202ENST00000345392 MTERF4Q7Z6M4 381 aaKnown RBP21.52■■□□□ 1.04
VHL-202ENST00000345392 IL25Q9H293 177 aa21.52■■□□□ 1.04
VHL-202ENST00000345392 TNRQ92752 1358 aa21.52■■□□□ 1.04
VHL-202ENST00000345392 PNMA6EA0A0J9YXQ4 647 aa21.52■■□□□ 1.03
VHL-202ENST00000345392 KIAA0232Q92628 1395 aa21.51■■□□□ 1.03
VHL-202ENST00000345392 SALL3Q9BXA9 1300 aa21.51■■□□□ 1.03
VHL-202ENST00000345392 GNAI2P04899 355 aa21.51■■□□□ 1.03
VHL-202ENST00000345392 SLC26A8Q96RN1 970 aa21.51■■□□□ 1.03
VHL-202ENST00000345392 LARP6Q9BRS8 491 aaKnown RBP21.51■■□□□ 1.03
VHL-202ENST00000345392 FAM177BA6PVY3 158 aa21.5■■□□□ 1.03
VHL-202ENST00000345392 PHF14O94880 888 aa21.5■■□□□ 1.03
VHL-202ENST00000345392 MYRIPQ8NFW9 859 aa21.5■■□□□ 1.03
VHL-202ENST00000345392 SRCIN1Q9C0H9 1055 aa21.5■■□□□ 1.03
VHL-202ENST00000345392 TCHHQ07283 1943 aa21.49■■□□□ 1.03
VHL-202ENST00000345392 KDM4FA0A1W2PPD8 638 aa21.49■■□□□ 1.03
VHL-202ENST00000345392 ADCY5O95622 1261 aa21.49■■□□□ 1.03
VHL-202ENST00000345392 HCLS1P14317 486 aaPredicted RBP21.49■■□□□ 1.03
VHL-202ENST00000345392 ANAPC15P60006 121 aa21.49■■□□□ 1.03
VHL-202ENST00000345392 NOLC1Q14978 699 aaKnown RBP eCLIP21.49■■□□□ 1.03
VHL-202ENST00000345392 CNPY2Q9Y2B0 182 aa21.49■■□□□ 1.03
VHL-202ENST00000345392 ITSN1Q15811 1721 aa21.49■■□□□ 1.03
VHL-202ENST00000345392 ADAMTSL3P82987 1691 aa21.49■■□□□ 1.03
VHL-202ENST00000345392 CCT4P50991 539 aaKnown RBP21.49■■□□□ 1.03
VHL-202ENST00000345392 MAP3K19Q56UN5 1328 aa21.48■■□□□ 1.03
VHL-202ENST00000345392 WDR33Q9C0J8 1336 aaKnown RBP21.48■■□□□ 1.03
VHL-202ENST00000345392 DTNBO60941 627 aa21.48■■□□□ 1.03
VHL-202ENST00000345392 PLCB2Q00722 1185 aa21.48■■□□□ 1.03
VHL-202ENST00000345392 MTHFSDQ2M296 383 aaKnown RBP21.48■■□□□ 1.03
VHL-202ENST00000345392 PIBF1Q8WXW3 757 aa21.48■■□□□ 1.03
VHL-202ENST00000345392 MAP4K4O95819 1239 aaPredicted RBP21.47■■□□□ 1.03
VHL-202ENST00000345392 TSPYL4Q9UJ04 414 aa21.47■■□□□ 1.03
VHL-202ENST00000345392 AKAP12Q02952 1782 aa21.47■■□□□ 1.03
VHL-202ENST00000345392 PEAK1Q9H792 1746 aa21.46■■□□□ 1.03
VHL-202ENST00000345392 LTKP29376 864 aa21.46■■□□□ 1.03
VHL-202ENST00000345392 IL1RAPL2Q9NP60 686 aa21.46■■□□□ 1.03
VHL-202ENST00000345392 NUTM2GQ5VZR2 741 aa21.45■■□□□ 1.02
VHL-202ENST00000345392 FAM184AQ8NB25 1140 aa21.45■■□□□ 1.02
VHL-202ENST00000345392 CCDC183Q5T5S1 534 aa21.45■■□□□ 1.02
VHL-202ENST00000345392 SMAP1Q8IYB5 467 aaPredicted RBP21.45■■□□□ 1.02
VHL-202ENST00000345392 ZNF710Q8N1W2 664 aa21.45■■□□□ 1.02
VHL-202ENST00000345392 CCDC94Q9BW85 323 aaPredicted RBP21.45■■□□□ 1.02
VHL-202ENST00000345392 UVSSAQ2YD98 709 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms