RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 LRRFIP2Q9Y608 721 aaKnown RBP21.13■□□□□ 0.97
SMC4-201ENST00000344722 GLRX3O76003 335 aaKnown RBP21.13■□□□□ 0.97
SMC4-201ENST00000344722 MICALCLQ6ZW33 695 aa21.13■□□□□ 0.97
SMC4-201ENST00000344722 LMAN1P49257 510 aa21.13■□□□□ 0.97
SMC4-201ENST00000344722 TRIM34Q9BYJ4 488 aa21.13■□□□□ 0.97
SMC4-201ENST00000344722 OGFRQ9NZT2 677 aa21.13■□□□□ 0.97
SMC4-201ENST00000344722 NUTM1Q86Y26 1132 aa21.13■□□□□ 0.97
SMC4-201ENST00000344722 KIF1BPQ96EK5 621 aa21.13■□□□□ 0.97
SMC4-201ENST00000344722 PCDHB15Q9Y5E8 787 aa21.11■□□□□ 0.97
SMC4-201ENST00000344722 KIAA1328Q86T90 577 aa21.11■□□□□ 0.97
SMC4-201ENST00000344722 KIF20AO95235 890 aa21.11■□□□□ 0.97
SMC4-201ENST00000344722 TMX3Q96JJ7 454 aa21.11■□□□□ 0.97
SMC4-201ENST00000344722 IVLP07476 585 aa21.1■□□□□ 0.97
SMC4-201ENST00000344722 CTNNA3Q9UI47 895 aa21.1■□□□□ 0.97
SMC4-201ENST00000344722 ATAD2Q6PL18 1390 aa21.1■□□□□ 0.97
SMC4-201ENST00000344722 GJB2P29033 226 aa21.1■□□□□ 0.97
SMC4-201ENST00000344722 VPS37DQ86XT2 251 aa21.1■□□□□ 0.97
SMC4-201ENST00000344722 INCENPQ9NQS7 918 aa21.1■□□□□ 0.97
SMC4-201ENST00000344722 TUBB4AP04350 444 aa21.1■□□□□ 0.97
SMC4-201ENST00000344722 GPATCH11Q8N954 259 aa21.1■□□□□ 0.97
SMC4-201ENST00000344722 ZNF397Q8NF99 534 aaPredicted RBP21.1■□□□□ 0.97
SMC4-201ENST00000344722 GTF2A1P52655 376 aaPredicted RBP21.09■□□□□ 0.97
SMC4-201ENST00000344722 CCDC158Q5M9N0 1113 aa21.09■□□□□ 0.97
SMC4-201ENST00000344722 TMC6Q7Z403 805 aa21.09■□□□□ 0.97
SMC4-201ENST00000344722 FAM200AQ8TCP9 573 aa21.09■□□□□ 0.97
SMC4-201ENST00000344722 CCDC141Q6ZP82 1450 aa21.09■□□□□ 0.97
SMC4-201ENST00000344722 PRG4Q92954 1404 aaPredicted RBP21.09■□□□□ 0.97
SMC4-201ENST00000344722 ZSCAN22P10073 491 aaPredicted RBP21.09■□□□□ 0.97
SMC4-201ENST00000344722 SMARCC1Q92922 1105 aaPredicted RBP21.09■□□□□ 0.97
SMC4-201ENST00000344722 PRAM1Q96QH2 718 aa21.09■□□□□ 0.97
SMC4-201ENST00000344722 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.09■□□□□ 0.975e-8■■■□□ 16.4
SMC4-201ENST00000344722 GIMAP6Q6P9H5 292 aa21.08■□□□□ 0.97
SMC4-201ENST00000344722 TTC12Q9H892 705 aaPredicted RBP21.08■□□□□ 0.96
SMC4-201ENST00000344722 EPRSP07814 1512 aaKnown RBP21.07■□□□□ 0.96
SMC4-201ENST00000344722 TTC39AQ5SRH9 613 aa21.07■□□□□ 0.96
SMC4-201ENST00000344722 CCDC186Q7Z3E2 898 aa21.07■□□□□ 0.96
SMC4-201ENST00000344722 USP48Q86UV5 1035 aa21.07■□□□□ 0.96
SMC4-201ENST00000344722 RBM33Q96EV2 1170 aaKnown RBP21.07■□□□□ 0.96
SMC4-201ENST00000344722 CDK5RAP3Q96JB5 506 aa21.07■□□□□ 0.96
SMC4-201ENST00000344722 SYNJ2O15056 1496 aa21.07■□□□□ 0.96
SMC4-201ENST00000344722 ABCC5O15440 1437 aa21.06■□□□□ 0.96
SMC4-201ENST00000344722 WASF1Q92558 559 aa21.06■□□□□ 0.96
SMC4-201ENST00000344722 CABP1Q9NZU7 370 aa21.06■□□□□ 0.96
SMC4-201ENST00000344722 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.06■□□□□ 0.96
SMC4-201ENST00000344722 CCDC69A6NI79 296 aa21.06■□□□□ 0.96
SMC4-201ENST00000344722 CDK19Q9BWU1 502 aa21.06■□□□□ 0.96
SMC4-201ENST00000344722 IL16Q14005 1332 aa21.06■□□□□ 0.96
SMC4-201ENST00000344722 PARD3Q8TEW0 1356 aa21.06■□□□□ 0.96
SMC4-201ENST00000344722 G3V3G9 751 aa21.06■□□□□ 0.96
SMC4-201ENST00000344722 SLU7O95391 586 aaKnown RBP21.06■□□□□ 0.96
SMC4-201ENST00000344722 DCAF8Q5TAQ9 597 aa21.06■□□□□ 0.96
SMC4-201ENST00000344722 SIL1Q9H173 461 aa21.06■□□□□ 0.96
SMC4-201ENST00000344722 IMMTQ16891 758 aaKnown RBP21.05■□□□□ 0.96
SMC4-201ENST00000344722 CEP131Q9UPN4 1083 aa21.05■□□□□ 0.96
SMC4-201ENST00000344722 CCAR1Q8IX12 1150 aaKnown RBP21.05■□□□□ 0.96
SMC4-201ENST00000344722 SKILP12757 684 aa21.04■□□□□ 0.96
SMC4-201ENST00000344722 ZNF692Q9BU19 519 aaPredicted RBP21.04■□□□□ 0.96
SMC4-201ENST00000344722 SRRTQ9BXP5 876 aaKnown RBP21.04■□□□□ 0.96
SMC4-201ENST00000344722 FSIP1Q8NA03 581 aa21.04■□□□□ 0.96
SMC4-201ENST00000344722 RAPGEF4Q8WZA2 1011 aa21.04■□□□□ 0.96
SMC4-201ENST00000344722 EIF5P55010 431 aaKnown RBP21.03■□□□□ 0.96
SMC4-201ENST00000344722 PLEKHO1Q53GL0 409 aaPredicted RBP21.03■□□□□ 0.96
SMC4-201ENST00000344722 RNF123Q5XPI4 1314 aa21.03■□□□□ 0.96
SMC4-201ENST00000344722 RPGRIP1LQ68CZ1 1315 aa21.03■□□□□ 0.96
SMC4-201ENST00000344722 HMGB1P09429 215 aaKnown RBP21.03■□□□□ 0.96
SMC4-201ENST00000344722 ANAPC15P60006 121 aa21.03■□□□□ 0.96
SMC4-201ENST00000344722 ARFGAP3Q9NP61 516 aa21.03■□□□□ 0.96
SMC4-201ENST00000344722 SEC24BO95487 1268 aa21.03■□□□□ 0.96
SMC4-201ENST00000344722 TCEAL9Q9UHQ7 104 aa21.03■□□□□ 0.96
SMC4-201ENST00000344722 IRX3P78415 501 aaPredicted RBP21.02■□□□□ 0.96
SMC4-201ENST00000344722 DNAAF4Q8WXU2 420 aa21.02■□□□□ 0.96
SMC4-201ENST00000344722 TAF4BQ92750 862 aa21.02■□□□□ 0.96
SMC4-201ENST00000344722 PTPRCP08575 1304 aa21.02■□□□□ 0.96
SMC4-201ENST00000344722 DISP3Q9P2K9 1392 aa21.02■□□□□ 0.96
SMC4-201ENST00000344722 ZSCAN25Q6NSZ9 544 aa21.02■□□□□ 0.96
SMC4-201ENST00000344722 NLRP6P59044 892 aa21.02■□□□□ 0.95
SMC4-201ENST00000344722 CTR9Q6PD62 1173 aa21.02■□□□□ 0.95
SMC4-201ENST00000344722 SLC3A2P08195 630 aaKnown RBP21.01■□□□□ 0.95
SMC4-201ENST00000344722 ARHGAP45Q92619 1136 aa21.01■□□□□ 0.95
SMC4-201ENST00000344722 CNPY2Q9Y2B0 182 aa21.01■□□□□ 0.95
SMC4-201ENST00000344722 ANO6Q4KMQ2 910 aa21.01■□□□□ 0.95
SMC4-201ENST00000344722 KDM2BQ8NHM5 1336 aa21.01■□□□□ 0.95
SMC4-201ENST00000344722 PSME1Q06323 249 aa21■□□□□ 0.95
SMC4-201ENST00000344722 SPA17Q15506 151 aa21■□□□□ 0.95
SMC4-201ENST00000344722 TAX1BP1Q86VP1 789 aa21■□□□□ 0.95
SMC4-201ENST00000344722 GRIN2BQ13224 1484 aa21■□□□□ 0.95
SMC4-201ENST00000344722 TFIP11Q9UBB9 837 aaKnown RBP21■□□□□ 0.95
SMC4-201ENST00000344722 RALGAPBQ86X10 1494 aa21■□□□□ 0.95
SMC4-201ENST00000344722 RNF187Q5TA31 235 aaPredicted RBP21■□□□□ 0.95
SMC4-201ENST00000344722 MYRIPQ8NFW9 859 aa21■□□□□ 0.95
SMC4-201ENST00000344722 THUMPD2Q9BTF0 503 aaKnown RBP21■□□□□ 0.95
SMC4-201ENST00000344722 MNAT1P51948 309 aa21■□□□□ 0.95
SMC4-201ENST00000344722 TANGO6Q9C0B7 1094 aa21■□□□□ 0.95
SMC4-201ENST00000344722 U3KPZ7 1027 aaPredicted RBP21■□□□□ 0.95
SMC4-201ENST00000344722 GNG11P61952 73 aa21■□□□□ 0.95
SMC4-201ENST00000344722 ENOX2Q16206 610 aaKnown RBP21■□□□□ 0.95
SMC4-201ENST00000344722 CAMSAP2Q08AD1 1489 aa20.99■□□□□ 0.95
SMC4-201ENST00000344722 CDK13Q14004 1512 aaKnown RBP20.99■□□□□ 0.95
SMC4-201ENST00000344722 NACAP1Q9BZK3 213 aa20.99■□□□□ 0.95
SMC4-201ENST00000344722 RAI14Q9P0K7 980 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms